Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00592 ATGGGTGCTACATTTAAGGCTTTGAGCCAACAGTTCAGGCTTTTCGTTTTCCATAAACGTTCCATAATTTCAGCTTCTTGTGATTCATTTGGTTCCTCTTCCCTCACTCTCTCATCGCATCCTGCATACCCCAGGTTTTGTTTCTCGCAGTTTCGGTTGTATTCATCATCACCTCCTGCATTCATGGAGATGGTCACAGCAGTTTCTAAACATGGGCTTGAAGCTCATGACAGTGTTGCCATTAGAGCAGACCAAAAGAGTTATAGTTTCAAGCAGCTCGTATCTTCTGCACAGGAGATATCAAATCTCTTATGTGGAAATGACATGAAATCCGGAAATATTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAGTTTGTTGCTGCAATGCTTGGGACTTGGCTTAGTGGAGGTGTTGCTGTGCCACTTGCACTGAGCTATCCAGAAACAGAGCTATTATATGTGATGAATAACGCTGACGTGTCTGCAATTTTGAGTACTGAAGATCATAGTCAAACAATGCAAAATGTTGCCAATAAAAGCTCTTCTCAGTTTTTCCTAATTCCTCCTGTTCCCAATAAATCCTTGGAGAAGAGCATAGATGAAGATTCACAAAATAGAGAAATGCAGGAAGAAAGAATTCATCAGGCAAATATCAAAAGAACAAGTGAAGATCCAGCATTGATATTGTACACTAGTGGGACAACTGGTAAACCTAAGGGAGTCGTTCACACGCATCGAAGTATTAGTGCACAGGTTCAAACCTTGGCTAAAGCGTGGGAGTACACATCTGCTGATCAATTTCTGCATTGTCTACCTCTTCATCATGTTCATGGACTTTTCAATGCTTTGCTGGCCCCACTTTATGCTGGTTCCACGGTTGACTTTCTGCCCAAATTTAGCGTGAGTGGAGTTTGGCAGAGATGGCGTGAGTCCTATCCAGTTGAAGGAACTAAGGCTGAGCATGCTATAACTTTGTTCACTGGAGTTCCAACTATTTATACCAGATTGATACAAGGTTACCAAGCCATGGACCCTCAGTTGCAAGCCGCTTCAGCTGCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATAGGCTGTTGGAGAGATATGGCATGACTGAATTTGTCATGGCAATATCAAATCCCTTGAAAGGTGAGCGGAAGGCAGGCACTGTTGGCAAACCTTTTCCTGGTGTGCAGGTTAAGATTCTTGCTGATGAAGAGAGTGGGAGTAATGTAAATAAAGTGGGCGAGCTGTGCGTCAAAAGCCCATCATTGTTCAAAGAATATTGGAAACTTCCTGAGGTAACAAGGGAATCATTCATTGATGACGGCTTCTTCAAAACTGGAGATGCAGTTACTATGGATGAAGATGGATATTACATTATTTTAGGACGTACCAATGCCGATATAATGAAGGTCGGTGGCTACAAACTCTCTGCACTAGAAATTGAATCAGTCCTATTAGAGAACCCAGCTGTGTCAGAATGTTGCGTGTTGGGCTTACCGGACAAAACTTACGGAGAAGTAGTTTGTGCAATTATTGTGGCAGAGGCTGAGACTAAGAAGAAGAGAGAGGAAGAGTCTAAACCTGCTATAACCTTAGAAGAATTGACCTCCTGGGCCAAAGACAGACTTGCACCTTACAAGATACCCACTCGATTGTTCCTTTGGGACTCTCTTCCTCGTAATGCAATGGGGAAGGTCAACAAAAAAGAATTGAAGAAATTGCTGGCTCCGGAGCAGTAA 1815 0.4347 MGATFKALSQQFRLFVFHKRSIISASCDSFGSSSLTLSSHPAYPRFCFSQFRLYSSSPPAFMEMVTAVSKHGLEAHDSVAIRADQKSYSFKQLVSSAQEISNLLCGNDMKSGNIGGARIGIVAKPSAEFVAAMLGTWLSGGVAVPLALSYPETELLYVMNNADVSAILSTEDHSQTMQNVANKSSSQFFLIPPVPNKSLEKSIDEDSQNREMQEERIHQANIKRTSEDPALILYTSGTTGKPKGVVHTHRSISAQVQTLAKAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGSTVDFLPKFSVSGVWQRWRESYPVEGTKAEHAITLFTGVPTIYTRLIQGYQAMDPQLQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADEESGSNVNKVGELCVKSPSLFKEYWKLPEVTRESFIDDGFFKTGDAVTMDEDGYYIILGRTNADIMKVGGYKLSALEIESVLLENPAVSECCVLGLPDKTYGEVVCAIIVAEAETKKKREEESKPAITLEELTSWAKDRLAPYKIPTRLFLWDSLPRNAMGKVNKKELKKLLAPEQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00592 604 PANTHER ACYL-COA SYNTHETASE 65 598 - -
Accr6g00592 604 FunFam Acyl-CoA synthetase family member 3 70 488 - -
Accr6g00592 604 Pfam AMP-binding enzyme C-terminal domain 505 590 IPR025110 -
Accr6g00592 604 Gene3D - 492 604 IPR045851 -
Accr6g00592 604 Coils Coil 196 223 - -
Accr6g00592 604 Pfam AMP-binding enzyme 76 495 IPR000873 -
Accr6g00592 604 ProSitePatterns Putative AMP-binding domain signature. 232 243 IPR020845 -
Accr6g00592 604 SUPERFAMILY Acetyl-CoA synthetase-like 67 601 - -
Accr6g00592 604 CDD MCS 77 598 - -
Accr6g00592 604 Gene3D - 66 488 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00592 Accr-Chr6 11715546 11722179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00592 227 600 Monolignol Biosynthesis Gene Families AT4G19010 28.424 6.42e-43 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00592 K18660 - gmx:100813324 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00592 6 11715546 11722179 Accr6g00592 6 11715546 11722179 ECH