Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00582 ATGGGTGGGAACCCTAATTTGTGGAGCAATATGCATGAAGAGGATGCTTATGTTATCGGATCTTCCATTCCTTTTAGTTCAGTCCCTCAAAACCCAGAGCCTCCTTCTTCCACCTGGAGCCAGCTCCTCTTCTCAGGAGCACCAGGAGAAGAAGAGGGATTGAGTTTTGATCATTTTCAAGCAAAGAAGTTGGCAACCTCATGGGAAGAACAATTTTTGAATCCATCCTTTTCTAGAGTTCATCACAATCTTGTTGAAGGAATGATAAAGCAAGAGGGCGGTTCTTGCTTGTACGGCCATGGCGGCAGCGAGGAATTTCAGGGTACTTGTTCTTCATCATCTGGTGGTGGGCCAGCAGCAGCTAATTGGTCACATATGTTAGCTCCTGTTTCTTCTTCTCCTAGGTCTTGTGTCACTAGCTTGATTACTAACAACAACAACAACAACAACACTAGTCTTTTGGATTCTTTCTCTTATAAGAAGCCTGATACTAAGAAAACTCATCGTCTTCCTGCAGATCACTCACCTGAGAGTAGCACAGCCACTGGTGGAATCTGTAAGAAGGCTAGGGTTCAAGCATCTTCTAGCCAGCCTTCTCTCAAGGTAAGGAAGGAGAAGCTGGGAGATAGAATATCAGCCCTCCACCAACTTGTTTCTCCTTTTGGAAAGACTGACACAGCTTCAGTGTTGTTAGAAGGCATTGGATATATCAGATTCCTTCAAAGTCAAATTGAGGCTCTCTGTTTTCCCTATTTCGGAAATTCATCAAAAAACTTGAGGAATCATCAACTTGTGAATCATGGAGAGAGGAATTCTGTATTCCCAGAGGACCCTGGACAGCTGTTGAATAATGACTCAACCCTCAAGAGAAATGGAGCTTCAAACCAGGAAAATGGAGAAGAAAAGGCAAAGGACTTGAGAAGCAGGGGATTATGCCTGGTGCCAATTTCTTTGAGCGATCATTTTGGGATCGATCATAATAATATTGGAGCTGATTTTTGGTCATCCACTTATGCCACTGCTTTTAATTAA 1032 0.4312 MGGNPNLWSNMHEEDAYVIGSSIPFSSVPQNPEPPSSTWSQLLFSGAPGEEEGLSFDHFQAKKLATSWEEQFLNPSFSRVHHNLVEGMIKQEGGSCLYGHGGSEEFQGTCSSSSGGGPAAANWSHMLAPVSSSPRSCVTSLITNNNNNNNTSLLDSFSYKKPDTKKTHRLPADHSPESSTATGGICKKARVQASSSQPSLKVRKEKLGDRISALHQLVSPFGKTDTASVLLEGIGYIRFLQSQIEALCFPYFGNSSKNLRNHQLVNHGERNSVFPEDPGQLLNNDSTLKRNGASNQENGEEKAKDLRSRGLCLVPISLSDHFGIDHNNIGADFWSSTYATAFN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00582 343 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 56 321 - -
Accr6g00582 343 MobiDBLite consensus disorder prediction 163 183 - -
Accr6g00582 343 Gene3D - 200 261 IPR036638 GO:0046983
Accr6g00582 343 CDD bHLH_AtbHLH_like 201 247 IPR045239 -
Accr6g00582 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 191 240 IPR011598 GO:0046983
Accr6g00582 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 201 251 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00582 Accr-Chr6 11568225 11573149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00582 171 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 63.158 3.73e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00582 - - gmx:100802121 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00582 6 11568225 11573149 Accr6g00582 6 11568225 11573149 ECH