Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00545 ATGGGCTGTACGGATACGAGCCGGTTGTGCACTTCATTCTTGGCCTTCAAACCTCAACCAAACCAGACGCTAGCAGTTATACAGAGTATGTTCGATGTACTGCCCGGAGATATCACCGTGGAAGGCAATGGCTGGGATTATGTGTTCATCAGGAAGAACTGTTCATGCGCTTATGGTATAAAGAAATATGTGTCCAACACTACTTTCACAGTGAAATCTAATGAAGGGATTGTGCATGATTTGGTGATGGATGCCTATGATGGCCTTGCTATCTTGCCCAACACCACCAGGAGGGCCAAAAACGGCGCTGTCATATCGCTGAGGTTGTTTTGTGGGTGTTCTAGTGGCTTGTGGAACTATTTGTTGAGTTATGTCATGAGAGATGGTGATAGTGTTGAATCTCTGGCGAGTCGGTTTGGGGTTAGTATGGATGCTATAGAGACGGTGAATGGTATTACTAATCCAGATAATGTCACTGTGGGATCTCTTTATTATATACCTCTGGATTCAGCTCCTGGCGATCCATATCCTTTGAAGAATGATACTCCTCCAGCACCTGTTCCTGCCCCATCTGCTGACAATTTTTTAGCTAATCAAGTCGATAATAAGGCTCATGTGCCATACAAATGGATCCTTGGTGGTTTAGGGGTTGTTCTTGCTCTCATCATACTAAGCATAATTCTCTGTGTTTCCCTGCGATCCTCACATTGTTTCAATCAAGCCAGAAGCCATGGAAAAGATACTGAGCCCAAGACCTTTCATAAGTTTCATATTCTTCGAAGTTCAAGTTTTTGTTGTGTTTCAGGAAGGTACATCAGTGAAAAGTCTGTAGACCAGAAGCAAACTGACGGTGAACCTAGCAACGTCCAGATTACCATTCCCAAAGTTCCAGCTCTAGGGACTGATGTATTTGACACGGATAAGCCTGTTGTTTTCACATATGAAGAGATTTTCTCATCAACTGATTGCTTCTCTGATTCAAATCTACTTGGCCATGGTACATATGGTTCTGTTTATTATGGCTTGCTCCGTGACCAGGAAGTTGCTATAAAAAGAATGACAGCTACAAAAACTAAAGAATTTATGTCTGAGATGAAAGTCTTGTGCAGGGTTCATCATACAAATCTGGTAGAATTGATCGGCTATGCTACTACACATGATGAACTTTTCCTTATTTATGAATATGCACTGAAGGGATCACTCAAAAGCCATTTACATGATCCTCAGAATAAGGGTCATTCCTCTCTTTCTTGGATCATGAGGGTCCAGATAGCACTTGATGCTGCTAGGGGCCTTGAATATATACATGAGCACACCAAAACCCATTACATCCACCGAGATATCAAAACAAGCAACATTTTACTAGATGCTTCCTTTAGAGCAAAGATCTCAGATTTTGGGTTAGCAAAACTCGTTGGGACAGCAAATGAGGGAGAAATTGCTACCACTAGAGTTATTGGTACATATGGTTATCTTGCTCCAGAGTACTTGAGTGATGGTCTTGCGACAACCAAAAGTGATGTCTATGCATTTGGTGTTGTTCTCTTTGAGATTATATCTGGGAAGGAGGCTATCATTCGAACAGAAGGCACAATGACCAAAAACCCAGAAAGACGTTCATTGGCATCTATTATGCTGGCAGCTCTTAGGAACACACCCGATTCGTTGAGCATGTCAAACATGAGAGATTATATTGATCCCAACATGATGGATCTTTATCCACATGATTGTGTATTCAAGATGGCGATACTGGCTAAGCAATGTGTGGACGACGATCCCATCGTACGACCTGACATGAAACAAGTTGTGATTTCTCTCTCACAGATTCTCTTGTCTTCTATTGAGTGGGAAGCAACTCTTGCTGGGAACAGTCAGGTTTTCAGTGGGCTTGTCCAGGGAAGATAG 1905 0.4236 MGCTDTSRLCTSFLAFKPQPNQTLAVIQSMFDVLPGDITVEGNGWDYVFIRKNCSCAYGIKKYVSNTTFTVKSNEGIVHDLVMDAYDGLAILPNTTRRAKNGAVISLRLFCGCSSGLWNYLLSYVMRDGDSVESLASRFGVSMDAIETVNGITNPDNVTVGSLYYIPLDSAPGDPYPLKNDTPPAPVPAPSADNFLANQVDNKAHVPYKWILGGLGVVLALIILSIILCVSLRSSHCFNQARSHGKDTEPKTFHKFHILRSSSFCCVSGRYISEKSVDQKQTDGEPSNVQITIPKVPALGTDVFDTDKPVVFTYEEIFSSTDCFSDSNLLGHGTYGSVYYGLLRDQEVAIKRMTATKTKEFMSEMKVLCRVHHTNLVELIGYATTHDELFLIYEYALKGSLKSHLHDPQNKGHSSLSWIMRVQIALDAARGLEYIHEHTKTHYIHRDIKTSNILLDASFRAKISDFGLAKLVGTANEGEIATTRVIGTYGYLAPEYLSDGLATTKSDVYAFGVVLFEIISGKEAIIRTEGTMTKNPERRSLASIMLAALRNTPDSLSMSNMRDYIDPNMMDLYPHDCVFKMAILAKQCVDDDPIVRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00545 634 SMART serkin_6 324 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00545 634 Pfam Protein tyrosine and serine/threonine kinase 328 604 IPR001245 GO:0004672|GO:0006468
Accr6g00545 634 Gene3D Transferase(Phosphotransferase) domain 1 397 620 - -
Accr6g00545 634 ProSiteProfiles Protein kinase domain profile. 324 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00545 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Accr6g00545 634 Gene3D Phosphorylase Kinase; domain 1 299 395 - -
Accr6g00545 634 SUPERFAMILY LysM domain 123 167 IPR036779 -
Accr6g00545 634 Gene3D LysM domain 119 174 IPR036779 -
Accr6g00545 634 FunFam Kinase family protein 298 395 - -
Accr6g00545 634 ProSiteProfiles LysM domain profile. 122 166 IPR018392 -
Accr6g00545 634 Pfam LysM domain 124 161 IPR018392 -
Accr6g00545 634 ProSitePatterns Protein kinases ATP-binding region signature. 330 351 IPR017441 GO:0005524
Accr6g00545 634 SUPERFAMILY Protein kinase-like (PK-like) 305 606 IPR011009 -
Accr6g00545 634 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 47 628 IPR044812 GO:0019199|GO:0045087
Accr6g00545 634 FunFam PTI1-like tyrosine-protein kinase 3 396 620 - -
Accr6g00545 634 SMART LysM_2 123 167 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00545 Accr-Chr6 10725624 10731792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00545 1 634 Receptor kinase-like Gene Family AT1G51940 68.069 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr6g00545 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00545 - - pcin:129289327 1174.07