Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00524 ATGGCTGGGGAATTCAGATGCAACTGGGCTTGGCTCTCTTTGTTATGGTTTGTCTCTGTATCAGTATTTGCAATTCAGGAAGCTGATGGGAAATCCATAGTTCTGGCTAGAGAGAAAAACTCTACACATCACAAACAGGCCAGAAGGAAATTAGATGATGTTGGTGGCTCTATTGACATTGACTGTGGCCTACTTGATGTGCTTGGCTATACTGATAACAAAACTGAGATACCTTACAAAACGGATTCAGAATACATCGATACCGGAGAAGACCGAGAGATATCAATTGAGTTCATTTCTGAAAATCTTGAAAGAACATATAGAAATGTAAGAAGCTTTCCTGAGGGTAAGAGGAATTGTTACACTCTAAGACATCCAGAAGGTAGAAATACTGTTTACCTGTTGAGAGCTTCTTTCTTGTATGGCAACTATGATGGTCTGGATCAACCTCCCAAGTTTGATCTTTATATTGGAGTCAACAAGTGGGACACAATAACCTTCGACAATGCATCCCAAATTGTCATAAAGGAGATTTTACACGTGCCGCCCATGGATGTTGTACATGTTTGCTTACTGAAAACTGATAAAGGAACTCCTTTTATATCAGCATTGCAGATGAGGCATCTTCATAATTCGATTTATACTAACAAATCTCAAACCTTAGCTCTATATAAACGCCTTGACTTTGGTTCAACAACCAATGAAATAGTGAGGTTTGAAGAAGATGCCTATGATAGAATTTGGCTTCCTTACAATTTACCTCATTGTAAGTCATTGAGTACTGGATTGAACATTGATTCCTTGAACAACGCATATCGGTTACCATCAACAGTAATGAGAACTGCTGTAACACCAACTAATGGTAGTGACCCACTGGAAGTTCAGTTTGACACTGGTGATCCCATTTCAAAATTCTATGTTTATATGCACTTTGCTGAGATTGAGGAGCTCCTGGAAAATGAACAAAGAGAATTCAACATCACATTGAATGGAAAATTGTTGGATGGGTCTTTAAACTATGTAGTCCTTCGATATTTAGACCTTACCAAAACAATTCACAATCCACAGCCCATCACAGGACCCAACCTTTGGTTCTCTTTGAATAAGAAAGAAAATTCCACTCTCCCTCCCATTCTCAATGCAATGGAGATTTACTTTGAGAAAGATTCATATCAGGAACCTACAGACCAAGAAGATGTTAATGCTATCATGGACATAAAAAAAGCCTACACTATTAAGTCATGGCAAGGAGATCCTTGTGCACCAATGTCCTTTTCATGGGATAGACTTGACTGCAGTTTCAATGGTTATCATGCACCTAGAATAATTAAATTAGATCTATCCTCCAGCAACTTGTCAGGGACAATAAGTGAATCATTTTCCATGCTTAAATCTTTAGAAAATCTGGATTTATCAAACAATGGTTTTACCGGATCGTTTCCTGATTTTTTCATACATTTGCAACACTTGAAGACTCTAAATTTATCAGGAAACAAGCTCTCTGGTGAAATTCCATTACCTCTCAAGGAAAGATCAGATAATGGATCACTTTTGTTGAGTGTGGATGGAAATCCTGACCTTTGTCAGCAAGCTCCATGCAAAGAAGACAAGAGTACTTTCCCACTGCATGCAGTCATAGCCATTATTTCATCCCTAGTCCTTTTTATTGTACTTTGTATTCTAGTCCGCATCATTTGGAGAAGGAAATACAGCAAAAAACCAGTTCATTTAACAGCGAATCAGCCAGTGACATCACATGAGGAAGTTGTGCTGAAGTCAAGCAATACACAATTCACATACTCCCAGATAGTAGATATTACAAATAACTTTGAGAAAATGATTGGAAAAGGAGGATCTGGAACTGTTTATCATGGCTCCTTATCTGATGACACACAAGTTGCCGTCAAACTGCTCTCATCAGCAGAAAGCTGTAGGCAGTTTCAGACAGAGGCAGAACTCTTAATGCGAGTTCATCATAGAAACTTAGCTTCCTTCCTTGGATATTGTAATGAAGGTGGACACACGGCAATCATATATGAATTCATGGCTTATGGGAACTTAGAGAAGTGTCTTTCAGGTTCGATGAAGAAATTATCAAGTTGGAAAAATAGGATTCAAATAGCAGTCGATGCTGCTCAAGGACTTGAGTATTTGCATCATGGCTGCAAGCCTCCTATAGTTCACAGGGACGTAAAGACATCGAACATTTTGCTGAATGAGAAAATGCAGGCAAAAGTTGCTGATTTTGGGTTCTCAAAGTCCTTTTCAACAGAAAGTGAAAGCCATATATCAACTGGAGTCATTGGAACATTCGGATACCTTGATCCGGATTACTACTCATCCTACAGGCTTACCGAGAAAAGTGATGTCTATAGTTTTGGCATTGTCCTTTTGGAGCTTATTACAGGGCAGAGAGCAATAATCAAAGGTCAAGAGAACACACACATTGTGAATTGGGCTACCCCTTTTGTTGAAAGAGGAGATCTGCGACAAATTGTTGATTCAAGGTTGCAAGGAGACTTTGATTTTGGTTCTGTGTGGAAGGCTGTGGAAGCAGCAATAGCTTGTGTATCCCCAACTTCTATCCAAAGACCAACAATGAGTTATATTGTCCCAGAATTAAAAGAAAGCTTAGAAATGGAATTAGCTCGTGAACAAAAGTCCCGGGATTCATATGGAAAAAAGCTGAAATCAAACAGCTCATTTGACACCCATGTTGTTGATCTTGAAGCTGCCTCTGGTCCAGAAGCAAGATAG 2757 0.3906 MAGEFRCNWAWLSLLWFVSVSVFAIQEADGKSIVLAREKNSTHHKQARRKLDDVGGSIDIDCGLLDVLGYTDNKTEIPYKTDSEYIDTGEDREISIEFISENLERTYRNVRSFPEGKRNCYTLRHPEGRNTVYLLRASFLYGNYDGLDQPPKFDLYIGVNKWDTITFDNASQIVIKEILHVPPMDVVHVCLLKTDKGTPFISALQMRHLHNSIYTNKSQTLALYKRLDFGSTTNEIVRFEEDAYDRIWLPYNLPHCKSLSTGLNIDSLNNAYRLPSTVMRTAVTPTNGSDPLEVQFDTGDPISKFYVYMHFAEIEELLENEQREFNITLNGKLLDGSLNYVVLRYLDLTKTIHNPQPITGPNLWFSLNKKENSTLPPILNAMEIYFEKDSYQEPTDQEDVNAIMDIKKAYTIKSWQGDPCAPMSFSWDRLDCSFNGYHAPRIIKLDLSSSNLSGTISESFSMLKSLENLDLSNNGFTGSFPDFFIHLQHLKTLNLSGNKLSGEIPLPLKERSDNGSLLLSVDGNPDLCQQAPCKEDKSTFPLHAVIAIISSLVLFIVLCILVRIIWRRKYSKKPVHLTANQPVTSHEEVVLKSSNTQFTYSQIVDITNNFEKMIGKGGSGTVYHGSLSDDTQVAVKLLSSAESCRQFQTEAELLMRVHHRNLASFLGYCNEGGHTAIIYEFMAYGNLEKCLSGSMKKLSSWKNRIQIAVDAAQGLEYLHHGCKPPIVHRDVKTSNILLNEKMQAKVADFGFSKSFSTESESHISTGVIGTFGYLDPDYYSSYRLTEKSDVYSFGIVLLELITGQRAIIKGQENTHIVNWATPFVERGDLRQIVDSRLQGDFDFGSVWKAVEAAIACVSPTSIQRPTMSYIVPELKESLEMELAREQKSRDSYGKKLKSNSSFDTHVVDLEAASGPEAR 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00524 918 Pfam Malectin-like domain 60 385 IPR024788 -
Accr6g00524 918 Pfam Protein tyrosine and serine/threonine kinase 610 818 IPR001245 GO:0004672|GO:0006468
Accr6g00524 918 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Accr6g00524 918 FunFam Leucine-rich repeat receptor-like kinase 398 530 - -
Accr6g00524 918 SMART serkin_6 608 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00524 918 ProSiteProfiles Protein kinase domain profile. 608 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00524 918 PANTHER OS07G0107800 PROTEIN-RELATED 58 878 - -
Accr6g00524 918 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 682 887 - -
Accr6g00524 918 SUPERFAMILY L domain-like 414 508 - -
Accr6g00524 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Accr6g00524 918 SUPERFAMILY Protein kinase-like (PK-like) 586 872 IPR011009 -
Accr6g00524 918 Gene3D Phosphorylase Kinase; domain 1 580 681 - -
Accr6g00524 918 Pfam Leucine rich repeat 444 500 IPR001611 GO:0005515
Accr6g00524 918 Gene3D Ribonuclease Inhibitor 399 521 IPR032675 -
Accr6g00524 918 Gene3D Transferase(Phosphotransferase) domain 1 682 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00524 Accr-Chr6 10400891 10407968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00524 50 918 Receptor kinase-like Gene Family AT2G19210 45.620 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Accr6g00524 Malectin_like 2.9e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00524 - - pcin:129288548 1561.2