Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00520 ATGCTCTCTCCTTCAGTTCTAGGATATCTTCAATTTCAGGCAGAGGCAAAACTTGCTAAAGTTCACCATAAACACTTGAATGCTCTGATAGGATATTGTGAAGATGGCACCAACGTTGCTCTAATCTATGAGTATATGGCTAATGGCGACTTAGCTAAGCATTTATCAGAGAAAAATGTGAACATCTTGAACTGGAAAAAACGGCTACAAATAGCAGTGGATGCTGCAGAAGGCTTGGAGTATATGCATACTGGTTGTAAGCCACCAATTGTTCACAGAGATGTTAAATCCAAAAACATCTTACTGGATGAACATTTTCGAGGCAAAATAGCTGATTTTGGATTGTCAAAAATCTTTCCTGATGAAGATGATACTCATATATATACTAGGATTGCTGGCACCCTAGGATATCTTGACCCTGCGTACTATAAGTCAAACAAGTTGAATGAAAAAAGTGATGTTTATAGTTTTGGGATTGTTCTTCTTGAGATAATTACAGGACAACCTGCCATATCCAAGACTGAAGAAAATACTCACATAGTCCAATGGGTTAATGTCATGCTTGCTGGATGCAAGATTGATGATGTTATGGATTCAAGATTAAAGGGAAACTTTGATACTGATTCTGCAACAAAAGCTTTGGATATTGCAATGGCCTGTGTTGAACCTTCTCCCCTGAGTAGGCCAACAATGAGTCAAGTAGTGATGCAATTGAGGCAATGTTTGGCTATGGAGACAGCTCGTGAAATTCACAGTCAAAATGATTTCTCATTTGGTGGAATGAGTGGAGAGAGTTCTCTGGCTAGATAG 810 0.3877 MLSPSVLGYLQFQAEAKLAKVHHKHLNALIGYCEDGTNVALIYEYMANGDLAKHLSEKNVNILNWKKRLQIAVDAAEGLEYMHTGCKPPIVHRDVKSKNILLDEHFRGKIADFGLSKIFPDEDDTHIYTRIAGTLGYLDPAYYKSNKLNEKSDVYSFGIVLLEIITGQPAISKTEENTHIVQWVNVMLAGCKIDDVMDSRLKGNFDTDSATKALDIAMACVEPSPLSRPTMSQVVMQLRQCLAMETAREIHSQNDFSFGGMSGESSLAR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00520 269 Pfam Protein kinase domain 18 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00520 269 SUPERFAMILY Protein kinase-like (PK-like) 11 238 IPR011009 -
Accr6g00520 269 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00520 269 Gene3D Transferase(Phosphotransferase) domain 1 47 262 - -
Accr6g00520 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 90 102 IPR008271 GO:0004672|GO:0006468
Accr6g00520 269 Gene3D Phosphorylase Kinase; domain 1 2 46 - -
Accr6g00520 269 SMART serkin_6 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00520 269 PANTHER OS07G0107800 PROTEIN-RELATED 4 242 - -
Accr6g00520 269 PIRSF ILK 9 257 - -
Accr6g00520 269 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 46 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00520 Accr-Chr6 10252247 10254209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00520 1 261 Receptor kinase-like Gene Family AT2G04300 56.818 7.59e-102 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Accr6g00520 Pkinase 9.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00520 - - psat:127087401 363.614