Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00518 ATGGAGGGTCTAAAGTGGGATGCCTCACAAGCTGTGGAGAACCTACCTATATTGTGGAGCAATATGGAAGAAGAACAAGAGCTTGAAGCAACCTTGAATTCAAGCTTTCCTAATAATCCAATGCAAGAGATGCAAAAGCAGCCTATAACAGGTCATCATCTTCATCAACATCTATATGAAAATTCTGGAAAAGGGTTGATCAAAGAGATGATGGTTCAATTATCAGAAGCAGAAGCAGGATTAGGAGCAGCAGCTACTAGCAGTTCAAAGACAAATCTGTCACAGCTATTAGGTGGGTCTAGCTGGGCAGCTACTGGTGGTGGACCTTACAGTATGAATAACCCATTTGGTAATTTTGATCCTCCAGAGGAATTCAACATGGCCCACCAACAACTTCTCGTCAATAATGGCTCACAAAATGGTACCACCACCACCTTCTCTGCTGAGTCACTAGATTGCTTCTTCTCAACTACAAATAGCAACACAGACACATCAATTGAAGATGATGGAGTAGTCTCCATGATCTTACCAAATTGCAGCAGAAGATCAAACTTATTATGGAGCTATAGTTATAACAACAATGGAGGAAGTGAATCTGAGAGTACTACTAATAACGCTGATCATGAAAAATTATCTCAGGGTTCCTCAGATCTTTATGCAGATCAAGGAACAAAAATTGCAGAATCCACCAATAAGTGTTCAAAAAGGAGACTTGATGATGCTTTTGATCAATATCCCTATTTTAGTACTGAAGAAGGTGGTGGTTCAAGTTCATTCAGGCTCATTGAGGAGGAGGAGGAGAAGAACAACAATAATCAAGCAAATCCCAAAAGATCCAGATGGGATTCTAAGTTTCCAACTTCTTCAAACATCAATTTCAAGCAGCCACATTCATCATCAACAACAACATCATCTTCCATGGAAGAACCAGACCCAGATGCCATAGCACAGATGAAAGAGATGATGTACAGGGCCGCAGCATTTAGGCCGGTGAATTTAGGGATGGAAGTTGTGGAGAAGCCGAAGAGGAAGAATGTGAAGATATCAGCAGATCCTCAAACTGTGGCTGCAAGGCTCAGAAGGGAGAGAATAAGCGAGAGAATTAGGGTTTTGCAGAAATTGGTTCCTGGTGGAACCAAGATGGACACTGCTTCAATGCTTGATGAAGCTGCAAATTACCTCAAGTTTTTAAGGTCACAAGTGAAAGCACTAGAGAGTCTAGGAAACAAAGTTGAGGCTATGAATTGTCCTCCCACTAATATTGCCTTCTCTTTTAACCCTTCTTTTCCCATGCAGTTTAACCCTAATAGCTACAACATCCAACACTGA 1329 0.4123 MEGLKWDASQAVENLPILWSNMEEEQELEATLNSSFPNNPMQEMQKQPITGHHLHQHLYENSGKGLIKEMMVQLSEAEAGLGAAATSSSKTNLSQLLGGSSWAATGGGPYSMNNPFGNFDPPEEFNMAHQQLLVNNGSQNGTTTTFSAESLDCFFSTTNSNTDTSIEDDGVVSMILPNCSRRSNLLWSYSYNNNGGSESESTTNNADHEKLSQGSSDLYADQGTKIAESTNKCSKRRLDDAFDQYPYFSTEEGGGSSSFRLIEEEEEKNNNNQANPKRSRWDSKFPTSSNINFKQPHSSSTTTSSSMEEPDPDAIAQMKEMMYRAAAFRPVNLGMEVVEKPKRKNVKISADPQTVAARLRRERISERIRVLQKLVPGGTKMDTASMLDEAANYLKFLRSQVKALESLGNKVEAMNCPPTNIAFSFNPSFPMQFNPNSYNIQH 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00518 442 MobiDBLite consensus disorder prediction 265 310 - -
Accr6g00518 442 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 188 435 IPR045843 GO:0003700|GO:0006355
Accr6g00518 442 MobiDBLite consensus disorder prediction 274 310 - -
Accr6g00518 442 Coils Coil 387 407 - -
Accr6g00518 442 Gene3D - 353 416 IPR036638 GO:0046983
Accr6g00518 442 FunFam BHLH transcription factor 351 415 - -
Accr6g00518 442 SMART finulus 354 403 IPR011598 GO:0046983
Accr6g00518 442 Pfam Helix-loop-helix DNA-binding domain 358 397 IPR011598 GO:0046983
Accr6g00518 442 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 410 IPR036638 GO:0046983
Accr6g00518 442 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 348 397 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00518 Accr-Chr6 10226318 10227646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00518 150 441 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 46.980 6.44e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr6g00518 HLH 2.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00518 - - gmx:100778004 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00518 6 10226318 10227646 Accr6g00518 6 10226318 10227646 ECH