Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00503 ATGCAAGACCCAACGGCATTTCAACCGATGAAACCCCAATTTCCTGAACAAGAACAGCTTAAATGTCCGCGTTGTGATTCTGCCAACACCAAATTCTGCTACTATAACAACTATAATCTCTCCCAGCCACGCTATTTTTGCAAGAATTGCAGAAGGTATTGGACCAAAGGCGGTGCTCTTCGAAACATACCAGTTGGTGGTGGAAGCAGGAAGAACACCAAACGATCGTCTTCGTCGACCACTACCAAACGCCCTCCGGCTTCATCTTCTTCTACTTCAACATCACCTTCTCCTGCATCGGTTCCGGCTTCCACAACAGTTCGTCCTGATCCTGACCCGACCCGGTTTTATCCCAACCCGAGTGTTCCCATGAACACTGGTGGCAGTTTCAGTTCCCTTCTGGCGTCAACTATGCATTGGGGTGGTTTGTGGGAGGGTCTGAATTCAAATGGTTCTGGTTTGAAAATGATGCAACTGAATGAATTTGGGGAGAATAATGTGGGTTCTGGCCATGTGAAGAACTTGGATTCGGGTCGAAACCCAGGGCCGGAAAGGCAGAGCAATGGTAATTCAGAGAGCTTTCTGGGTAAGCAAAATGTTGATTCAAGCTGTTGGAACAGTAGTAGCAATGGGTGGTCTGATCTTGCAATATATACACCAGGCTCAAGCTACCAGTAG 678 0.4749 MQDPTAFQPMKPQFPEQEQLKCPRCDSANTKFCYYNNYNLSQPRYFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSSSTTTKRPPASSSSTSTSPSPASVPASTTVRPDPDPTRFYPNPSVPMNTGGSFSSLLASTMHWGGLWEGLNSNGSGLKMMQLNEFGENNVGSGHVKNLDSGRNPGPERQSNGNSESFLGKQNVDSSCWNSSSNGWSDLAIYTPGSSYQ 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00503 225 MobiDBLite consensus disorder prediction 165 214 - -
Accr6g00503 225 MobiDBLite consensus disorder prediction 61 123 - -
Accr6g00503 225 MobiDBLite consensus disorder prediction 69 104 - -
Accr6g00503 225 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Accr6g00503 225 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 205 IPR045174 GO:0003700|GO:0006355
Accr6g00503 225 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Accr6g00503 225 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Accr6g00503 225 MobiDBLite consensus disorder prediction 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00503 Accr-Chr6 10037623 10038300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00503 11 143 C2C2-Dof Transcription Factor Family AT1G51700 58.955 3.83e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr6g00503 zf-Dof 3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00503 - - gmx:100798927 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00631 7 9378054 9378656 Accr6g00503 6 10037623 10038300 CCT
Accr6g00503 6 10037623 10038300 Accr6g00503 6 10037623 10038300 ECH