Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00494 ATGAATCGAGAACAGAAGCGAGGGAAGCAAGAAAGGGATTCTGATAATGCTGAGAAGGTCATTGTTGCCGTTAAGGCATCGAAGGAAATCCCTAAGACTGCTCTTGTCTGGTCTCTAACTCATGTTGTTCAACCTGGGGATTGTATTATTTTGTTAGTGGTTTTGCCTCCGCAAAGCTCAGGTAGAAGGTTATGGGGTTTTCCAAGATTTGCTGGTGACTGCGCCAGCGGTAACAAGAAGTCGTCTTCTGGAACAGCTTCAGAGAAGAAGTGTGATATCAATGATTCTTGTTCCCAGATGATCCTTCGGCTTCATGATGTCTATGATTCTAATAAGATAAATGTCAAGATTCAAACTGTATCTGGATCTCCGGTTGGAGGAGTAGCTGCAGAAGCCAAGAAAGTCCTGGCCAATTGGGTTATCTTAGACAAAGATCTCAAACATGAGGAAAAACGCTGCATGGAAGAATTGCAATGCAACATTGTAGCTATGAAGCGATCTCAACCAAAAGTTCTCCGTTTAAATTTGGTTGGATCACAAAAGACGGATCTTGAAGAAGCCAGTCCATTACCTTCTGAGAAAGAAATGCCTGGAAAACAAGGCAAACAGAAGAACGAATCTTTAAACTCCATAAAAGCACCTGTTGTCACCCCAACTAGCAGCCCGGAGCAAGAGACACCATTTACTGCAACTGAAGCTGGTACCTCATCAGTTTCAAGCTCAGATCCTGGGACCTCACCATTTTTTGTCCCAGAGATCAATGGTGAGTTACGGAAAGAGGAGACAATTAAGGAAAATGAAGAACTTGATGATACTAATTCGGACACAGACAGTGAAAATATGTCCACATCCTCAGCAAGCTTGAGATTCCAGCCTTGGATCTCAGAAATGCTTCTACATCAACGATCATCTCGGTGTGCAGAAGAAAGATCTGAGAGATCTCATAATAAGCCTCAAACATCTACTACCAGAGCCTTGCTTGAAAAGCTCTCGAGGCTTGAGAGAGATTCTGGATTTGAAATTTCAAACTACAGAAGTGAACTGGATTTCAGTGGAAATGTACGAGATGCAATAGCATTATCTAGGAATGCTCCTCCTGGTCCACCTCCATTATGTTCTATATGTCAACATAAGGCACCAGTTTTCGGAAAACCCCCAAGGTGGTTTAGCTATGCTGAGTTGGAGCTTGCTACCGGGGGATTTTCACAAGCCAACTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTATCAGATGGGCAAGTCATTGCAGTCAAGCAACATAAATTAGCAAGTTCTCAGGGTGATCATGAGTTTTGCTCAGAGGTAGAAGTCTTAAGCTGTGCTCAGCATCGAAATGTTGTTATGCTGATTGGGTTTTGTATAGAGGATAAAAGAAGGCTACTGGTTTATGAGTATATATGCAATGGATCACTGGATTCTCATTTATATGGGAGACAACGGGATGTATTAGAGTGGTCTGCAAGGCAAAAAATTGCCGTTGGAGCTGCTCGAGGGCTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATCATCCACCGGGACATGCGCCCAAACAATATTCTCATCACCCATGATTTTGAACCATTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACTGAAGTGGAAACTAGAGTCATAGGAACGTTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAGGCTGATGTTTATTCCTTTGGAGTGGTATTGGTGGAGCTCATTACGGGGCGAAAAGCTGTGGATCTCAATCGACCTAAAGGGCAGCAGTGTCTTACTGAATGGGCGCGACCACTGTTAAAGGAATGTGCCATCGAGGAACTGATTGATCCGAGGCTGGGAAATTCCTATTCGGAAGATGAGGTCTATTGTATGCTGCATGCTGCCTCATTATGCATACGGCGAGATCCTCATTCTAGACCTCGCATGTCACAGGTTCTCCGAATGCTGGAGGGTGACGTGGTCATGGAGACAAATTACTTAACTGATGGTTATGATGCCGGGAACAGGAGTGGTCGGATCTGGGCAGAGCAGCAGATGCAGCATCATTACAGTGGTCCCCTGCTGGAAGAGCCCCTGGAATCTTCATTCAGTGGAAAGCTTTCTCTGGAGAAGTACAGGTCTGCTTACTTTGAAAGGGACAAAGCCTAG 2214 0.4476 MNREQKRGKQERDSDNAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCIILLVVLPPQSSGRRLWGFPRFAGDCASGNKKSSSGTASEKKCDINDSCSQMILRLHDVYDSNKINVKIQTVSGSPVGGVAAEAKKVLANWVILDKDLKHEEKRCMEELQCNIVAMKRSQPKVLRLNLVGSQKTDLEEASPLPSEKEMPGKQGKQKNESLNSIKAPVVTPTSSPEQETPFTATEAGTSSVSSSDPGTSPFFVPEINGELRKEETIKENEELDDTNSDTDSENMSTSSASLRFQPWISEMLLHQRSSRCAEERSERSHNKPQTSTTRALLEKLSRLERDSGFEISNYRSELDFSGNVRDAIALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLSDGQVIAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDVLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTEVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLNRPKGQQCLTEWARPLLKECAIEELIDPRLGNSYSEDEVYCMLHAASLCIRRDPHSRPRMSQVLRMLEGDVVMETNYLTDGYDAGNRSGRIWAEQQMQHHYSGPLLEEPLESSFSGKLSLEKYRSAYFERDKA 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00494 737 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Accr6g00494 737 MobiDBLite consensus disorder prediction 187 201 - -
Accr6g00494 737 MobiDBLite consensus disorder prediction 202 247 - -
Accr6g00494 737 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 373 476 - -
Accr6g00494 737 Gene3D Transferase(Phosphotransferase) domain 1 477 683 - -
Accr6g00494 737 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 477 680 - -
Accr6g00494 737 SUPERFAMILY Protein kinase-like (PK-like) 385 677 IPR011009 -
Accr6g00494 737 CDD STKc_IRAK 407 673 - -
Accr6g00494 737 MobiDBLite consensus disorder prediction 304 323 - -
Accr6g00494 737 Pfam Protein kinase domain 405 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00494 737 MobiDBLite consensus disorder prediction 181 286 - -
Accr6g00494 737 PANTHER OS01G0750732 PROTEIN 269 679 - -
Accr6g00494 737 ProSiteProfiles Protein kinase domain profile. 401 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00494 737 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Accr6g00494 737 FunFam Dual-specific kinase DSK1-like 11 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00494 Accr-Chr6 9908386 9912615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00494 388 701 Trihelix Transcription Factor Family AT5G38560 50.000 7.31e-105 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Accr6g00494 Pkinase 9.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00494 - - gmx:100783226 1234.94