Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00493 ATGGAGACAAAACTTGAGCTCCTCCATGGAACAATTGAAGCCACCATCTTCAATGCTACCCCTTATGCACCTGCATTTCCCTTCAATTGCATCAATGCGAAAGGGAAACCTGCATATGTGACCATCAAGCTAGGAAACAAGAAGGTAGCAAAGACAAGTCAAGAACGGGATCGCGTGTGGAATCAAACCTTTCAGATTCAATGTGCTCACCCAGCAGATTCAATCATCATCATAACATTGAAAACATCATATTCCATTTTGGGGAGATTCCACATTCAGGCTCACAAGTTACTGAAGGAAGAGAGCATAATCAACGGTTTCTTCCCTCTCCACATGGAAAATGGAAAACCGAATCCTCAACTCAAATTAAGGTTTCTATTGTGGTTCAAACCAGCAGGGCTTGAACCAAGTTGGGAAAAGCTTCTAAGGAATGGGGAATTTCATGGCTTAAGGGATGCTTCGTTTCCACAAAGGTCTAATTGTGAGGTTAAGCTTTACCATGACGCTCACCATTCTTTTACTTATCAACCTCCTTTTGATCATTGTGGAGCTCCAAGAAGGCTATGGGAAGATGTGTATAAAGGTATTGATGGTGCAAAGTACTTGGTTTATATTGCAGGATGGTCCTTCAATCCTCAGATGGTTCTGGTCAGAGATCCAGAAACAGAAATCCCACATGCATTAGGAATAAAGCTTGGAGAGCTGTTAAAAAGGAAAGCAGAAGAAGGAGTAGCAGTGAGAGTTATGGTTTGGGATGATGAAACATCTTTGCCATTTATAAAGAACAAAGGTATGATGAATACCCATGATGAGGATGCTTTTGCATATTGCAGACACACAAAAGTTATATGCAGAAAGTGTCCAAGATTACACCATAAGTTTCCCACATGGTTCACTCACCACCAGAAGACTATAACTGTTGATGCCAAGGCACCGACGAAATCTGTGAATGATAGAGAAATTATGAGCTTCATTGGTGGGTTAGATTTGTGTGATGGCAGATACGACACGGAGGAGCATTCGTTGTTTCAAACGCTAAACAGCGAATCACATTGCAATGATTTCTATCAGAGTAATATTGCAGGAGCTAGCCTTAGTAAAGGAGGGCCAAGAGCACCTTGGCATGATGCTCATGCTTGTGTTATAGGTGGTGCTGCTTGGGACGTGTTAACAAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCCCTTTTAGTCCCTACAAGTTCCCTAGCAAACCTCATGCCCCAAACATTTTCAAGCATGCCAACAGAGAGGAATTGGAAAGTTCAAGTGTATAGATCAATTGACCATATCTCTGCCCACCAGTTTTCCAGAAAACTCACTGCGGAAAGGAGCATCCATGATGCTTATGTTGAAGCAATCAGGCGCGCTGATAGGTTTATATACGTAGAAAACCAGTATTTCATAGGGGGATGCCAGTTGTGGGACAAAGAGAAGCATAGTGGATGCAGAAATTTGATTCCTATTGAGATAGCACTTAAAGTGGTGAGTAAGATTAAAGCAAAAGAGAGATTTGCAGTGTATGTAGTGATTCCAATGTGGCCAGAAGGAATACCAGAAAGTGAAACAGTTCAGGACATTTTGTATTGGACGAGGGAAACAATTAGAATGATGTATAGGTTGATCGGAGAAGCAATACAAGCAAGTGGGGAATCAGGGCACCCAAGAGATTATTTGAATTTCTTTTGTTTAGCAAATAGGGAAAAGAAGGAAGAAGGAGAGTACATGCCACCACATTGTCCTCATGCTGAAACACAATATTGGAATGCCCAAAAGAGTAGAAGGTTCATGGTGTATGTCCACTCCAAGCTCATGATAGTGGATGACATGTATTTGTTGATAGGGTCAGCCAATGTGAACCAGAGATCCATGGATGGCGAAAGAGACACAGAGATAGCCATAGGATGCTACCAACCACAAGATGTGGATTCCAACAACCAAGCGATGAATCATGGCGAGATTCATGCATACAGGATGTCACTATGGTACGAGCACAGTAGGTGTGAAGAGGAAAGGTTGATGCTGGAGCCAGAGAGTTTGGAATGTGTTCGGAAAATGCGATCGATCGGAGATCAAATGTGGGAAATCTATAGCGGCGAAGAAATTGTGGACATGGAAGGCGTTCATCTGGTGAGCTACCCTTTGAAGGTGACGCAACAAGGTGTGGTATTAGATTTGAAAGAGTGTGATGGTTGTTTTCCAGACACACAATGCCCAGTGAAGGGCAAGAGATCCAAGGTGTTGCCTCCTATCTCCACTACTTAG 2292 0.4254 METKLELLHGTIEATIFNATPYAPAFPFNCINAKGKPAYVTIKLGNKKVAKTSQERDRVWNQTFQIQCAHPADSIIIITLKTSYSILGRFHIQAHKLLKEESIINGFFPLHMENGKPNPQLKLRFLLWFKPAGLEPSWEKLLRNGEFHGLRDASFPQRSNCEVKLYHDAHHSFTYQPPFDHCGAPRRLWEDVYKGIDGAKYLVYIAGWSFNPQMVLVRDPETEIPHALGIKLGELLKRKAEEGVAVRVMVWDDETSLPFIKNKGMMNTHDEDAFAYCRHTKVICRKCPRLHHKFPTWFTHHQKTITVDAKAPTKSVNDREIMSFIGGLDLCDGRYDTEEHSLFQTLNSESHCNDFYQSNIAGASLSKGGPRAPWHDAHACVIGGAAWDVLTNFEQRWTKQCDPSLLVPTSSLANLMPQTFSSMPTERNWKVQVYRSIDHISAHQFSRKLTAERSIHDAYVEAIRRADRFIYVENQYFIGGCQLWDKEKHSGCRNLIPIEIALKVVSKIKAKERFAVYVVIPMWPEGIPESETVQDILYWTRETIRMMYRLIGEAIQASGESGHPRDYLNFFCLANREKKEEGEYMPPHCPHAETQYWNAQKSRRFMVYVHSKLMIVDDMYLLIGSANVNQRSMDGERDTEIAIGCYQPQDVDSNNQAMNHGEIHAYRMSLWYEHSRCEEERLMLEPESLECVRKMRSIGDQMWEIYSGEEIVDMEGVHLVSYPLKVTQQGVVLDLKECDGCFPDTQCPVKGKRSKVLPPISTT 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00493 763 Gene3D Endonuclease Chain A 170 428 - -
Accr6g00493 763 Gene3D Endonuclease Chain A 444 657 - -
Accr6g00493 763 Pfam Phospholipase D Active site motif 298 334 IPR001736 GO:0003824
Accr6g00493 763 SUPERFAMILY Phospholipase D/nuclease 423 675 - -
Accr6g00493 763 PANTHER PHOSPHOLIPASE D 4 745 IPR015679 -
Accr6g00493 763 SUPERFAMILY Phospholipase D/nuclease 142 425 - -
Accr6g00493 763 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 334 IPR001736 GO:0003824
Accr6g00493 763 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 125 IPR035892 -
Accr6g00493 763 Gene3D C2 domain 23 129 IPR035892 -
Accr6g00493 763 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 605 632 IPR001736 GO:0003824
Accr6g00493 763 SMART pld_4 605 632 IPR001736 GO:0003824
Accr6g00493 763 SMART pld_4 296 334 IPR001736 GO:0003824
Accr6g00493 763 Pfam Phospholipase D C terminal 682 752 IPR024632 -
Accr6g00493 763 Pfam C2 domain 38 109 IPR000008 -
Accr6g00493 763 PIRSF PLD_plant 2 763 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00493 Accr-Chr6 9895968 9900576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00493 30 763 Phospholipase D Gene Family (Wang group) AT1G55180 63.257 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00493 K01115 - gmx:100807431 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00493 6 9895968 9900576 Accr6g00493 6 9895968 9900576 ECH