Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00481 ATGGCGCTGGGGGTGTTGTTTTTCCTGATAATTAAGCTGCATTTAGTTACCAGTGCCACACATTTTCATGGATATGAAGCAACCAATCAACACCATTCCAGAAGCCACGCAAGTATTGCTCTTCCACCAACCAAGTCATCTTATGGAGTTCCTACAAGTATTGCACTTCCACCTTCTAAGTCATTATCTAAGGCTCCTATAAAGGAATGGACCCATGGTTTTGTAGATTCTCCAATATTACATTATAGGCATGAACATTCCAGAAGAAAGTCCCCTGAACCAGCGCCAAAGCCAACTTACTCAGTTCATCCACCCGCCTACAGTCATCAAGGTATAGGTCCTTCTGTCTTCCAACCACAACCTCCTTTCTCTGCACCAGCAGGCTTGAAATTACCAGCACCAGCACCAGCACCAGCACCAGTAGTTCTATCAGATCACTTCAATGTGCCCTCTCCTTCGCCCAGAATTACACCTCAGGGTTTACCATTCAGGAAGACAAAGTCTCCACCAACAGCACCTGTTTTGGGTCTGCCACCTCCACCTCCTAATAAGGACTGTAAATGGGTGACTTGCTCAGAGCCCTTTACGTATGCACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAGCTTAGCCTTGGCATTTCAATATACAAGTTCTTTCCCTTGGTGTCAAAGCTAGCTAAGGAAATTGCTGCCAGTGTTTTACTGAATCATAACCAGGTTCGCATTGTGGGAGCCGATGAAGCTGGTCAGCAACTGGAGAAAACTATCGTTCTCATAAACTTGGTACCCACAGGACCAAGATTTGATGATGCAACAGCATTTTCAATATATAAGAAATTCTGGCACCGGGAGATCCACACAGATGCTTCCCTTTTTGGAGCCTGTGAAGTACTTCAGGTTCATTATCCAGGTCTTCCTCCTTCTCCACCTTCGATTCCCTCAAACATTGATAGCCCATTATTCCCGGGTAATGACAACAATGGAACAATGATGAAACCTTTGGGAGTGGCTATACCAAGGAAAGAAAAGACAGAAAGTGGAAAAATCATGACTTTAGTAATTGTGCTGTCATCTTTTACCGCTCTTATTATATTTGTTGGATTTGCATGGTTTTGTCTGAGGAGATGTAACTCTTTTGTTCATGAGAGCAAACAAATTCCAAACAAAATTCCATCCTCTTCAAAACTATCAGGGAGTTCCAGGTCATTGCCTAATAGGAGCATGCCAGGATTTGGTTCTACGCCCTTAAGTTCTAGAAGAATAACATATACAGGATCTGCTAAGACTTTTACTCTGAATGACATAGAGAAAGCGACTAACAATTTTGATGCTTCAAGAATATTAGGAGAAGGGGGCTTTGGGCCTGTTTATAAAGGGGTACTATATGATGGAAGGGACGTGGCTGTGAAGATTCTCAAGAGAGATGATCGACATGGTGGCCGTGAATTCCTAGCAGAAGTTGAGATGCTTAGCCGTCTCCACCATAGAAATTTAGTTAAATTGATAGGAATATGCATAGAGAATCAGACTCGGTGCCTAGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGTGCTGACAAGGAAACTAATCCACTCAATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTCGCGCCTTGGCTTATTTGCATGAAGATTCAAATCCGTGTGTCATACATCGGGACTTTAAATCCAGCAACATCTTGTTGGAACATGATTTTACACCCAAGGTTTCAGATTTTGGATTAGCAAGAACTGCCTTGGATGAGGGAAGCAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACCTAGCACCTGAATATGCAATGACAGGCCATCTCCTGGTCAAAAGTGACGTTTACAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTAAATTTCTCACAACCACCAGGTCAAGAAAACCTTGTTACTTGGGTTAGTCCGCTTCTCATGAGTAAGGAGGGTTTAGAGATGATCATTGACCCGGTTTTGAAGCCTGAAATCACCGTTGACTCTGTTGTAAAAGTTGCAGCAATTGCATCAATGTGTATTCAACTTGAAGTCTCTCAACGCCCATTCATGGGTGAAGTTGTTCAGGCTTTGAAGCTGGTATGCAGTGAACTTGAGGAAACAAGCACAAGAAAACTAAGTATTTTCCTAGAAGAGGGCCTTCAAGCCAAAGTAGATGAACAATCTTCAAGAATTTCATGTGAGATAGTGGATTTTTCTGGTCATGAAACTAAAGTAACAGTATCAACCTCAGAGTTTTTCAGCACATCAGGCCTGTATCTTGAGTCATCCAGGCCGAAATCGGCTTCGGGGCCTTTAACTACAGGAAAGAAAAAGCAGTTATGGCAGAAACTGAAGAGTTTGTCTAGAGGGAGCATGAGTGAACATGGGTCTTCAGCTCGACAATGGTCTGGTTCTCAGTAA 2490 0.4329 MALGVLFFLIIKLHLVTSATHFHGYEATNQHHSRSHASIALPPTKSSYGVPTSIALPPSKSLSKAPIKEWTHGFVDSPILHYRHEHSRRKSPEPAPKPTYSVHPPAYSHQGIGPSVFQPQPPFSAPAGLKLPAPAPAPAPVVLSDHFNVPSPSPRITPQGLPFRKTKSPPTAPVLGLPPPPPNKDCKWVTCSEPFTYAPPGSPCGCVWPLQVKLSLGISIYKFFPLVSKLAKEIAASVLLNHNQVRIVGADEAGQQLEKTIVLINLVPTGPRFDDATAFSIYKKFWHREIHTDASLFGACEVLQVHYPGLPPSPPSIPSNIDSPLFPGNDNNGTMMKPLGVAIPRKEKTESGKIMTLVIVLSSFTALIIFVGFAWFCLRRCNSFVHESKQIPNKIPSSSKLSGSSRSLPNRSMPGFGSTPLSSRRITYTGSAKTFTLNDIEKATNNFDASRILGEGGFGPVYKGVLYDGRDVAVKILKRDDRHGGREFLAEVEMLSRLHHRNLVKLIGICIENQTRCLVYELVPNGSVESHLHGADKETNPLNWNARMKIALGAARALAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGSKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVNFSQPPGQENLVTWVSPLLMSKEGLEMIIDPVLKPEITVDSVVKVAAIASMCIQLEVSQRPFMGEVVQALKLVCSELEETSTRKLSIFLEEGLQAKVDEQSSRISCEIVDFSGHETKVTVSTSEFFSTSGLYLESSRPKSASGPLTTGKKKQLWQKLKSLSRGSMSEHGSSARQWSGSQ 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00481 829 FunFam Receptor-like serine/threonine-protein kinase ALE2 523 736 - -
Accr6g00481 829 SUPERFAMILY Protein kinase-like (PK-like) 427 720 IPR011009 -
Accr6g00481 829 ProSiteProfiles Protein kinase domain profile. 447 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00481 829 MobiDBLite consensus disorder prediction 154 179 - -
Accr6g00481 829 CDD STKc_IRAK 453 721 - -
Accr6g00481 829 Gene3D Transferase(Phosphotransferase) domain 1 523 741 - -
Accr6g00481 829 Pfam Protein tyrosine and serine/threonine kinase 450 720 IPR001245 GO:0004672|GO:0006468
Accr6g00481 829 Gene3D Phosphorylase Kinase; domain 1 419 522 - -
Accr6g00481 829 MobiDBLite consensus disorder prediction 809 829 - -
Accr6g00481 829 MobiDBLite consensus disorder prediction 395 421 - -
Accr6g00481 829 FunFam receptor-like serine/threonine-protein kinase ALE2 420 522 - -
Accr6g00481 829 PANTHER OS01G0750732 PROTEIN 178 740 - -
Accr6g00481 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 569 581 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00481 Accr-Chr6 9643106 9647926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00481 183 820 Receptor kinase-like Gene Family AT5G56890 57.382 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Accr6g00481 PK_Tyr_Ser-Thr 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00481 - - gmx:100814040 1073.92