Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00479 ATGAACCTCTTTCAGAATTCCGACACCAACCTTAACCACGACGACAAGAAGGCTTGTGCTGCTTGCAAATACCGTCGTAGGAAGTGTGCTCCTGATTGCATTTTGGCTCCTTATTTCCCTCACGATCGCCATAGTCAATTCCTCAACGCCCATAAATTGTTTGGGGTTCGAAACATCACCAAAATCATAGAAAAACTGGACCCTTACCCCAAGGACGAAGCCATGCGAAGTATCATTTTTCAATCAGACATGCGAGCTAATGACCCAGTCGGAGGTTGTTGCATACAGGAGCTTGTAGCTCAGATTGAATACCATCGAGCTGAACTCGACCTTGTTCTTCAACAACTCGCTGTTTTTCGACCTCATCAATCTCCTAATATTAATACCAGTGTCAATGCGGATGATCATCATTTGAATAATGATGATGTTAATTCTTGGGACGGTCAGGAGTCCCTGTTTTTGTCGTTTGGCGATGATGATGAGAGTAATGCTGATGATGTCGGTGATGAATTGTACGATGATCAGAAACCTATGGCTTCTATGCTTGACATTAATTGTGATGAATTAGTGAAACGCAGTGATGATGAGGTGATATTGTTCAAGATAGAGAATGCAGAGGTAAATGGAGAGGTTAATAGCACTCAAAAAGTTCAAGATCATGATCAAAAAGTGCGACAACCTTGTTTGCGCTCACAAATTGTGCTAAATGAGAAATTATATAACACCTTTTAA 732 0.4126 MNLFQNSDTNLNHDDKKACAACKYRRRKCAPDCILAPYFPHDRHSQFLNAHKLFGVRNITKIIEKLDPYPKDEAMRSIIFQSDMRANDPVGGCCIQELVAQIEYHRAELDLVLQQLAVFRPHQSPNINTSVNADDHHLNNDDVNSWDGQESLFLSFGDDDESNADDVGDELYDDQKPMASMLDINCDELVKRSDDEVILFKIENAEVNGEVNSTQKVQDHDQKVRQPCLRSQIVLNEKLYNTF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00479 243 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 139 - -
Accr6g00479 243 Pfam Lateral organ boundaries (LOB) domain 18 110 IPR004883 -
Accr6g00479 243 ProSiteProfiles LOB domain profile. 17 118 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00479 Accr-Chr6 9623824 9624858 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00479 17 134 AS2 family AT3G13850 65.873 4.51e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr6g00479 LOB 9.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00479 - - gmx:100786728 194.512