Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00478 ATGGTGGAAGTTGCAGAGCCCAAAGCAGTGGCTGAGGCAGAGAAGAAGAAGGAGCAGAGTTTACCCTTTTATCAACTATTCTCTTTTGCAGATAAGTATGATTGGTTGCTCATGATCTCTGGGAGCTTGGGAGCTATCGTTCATGGCTCCTCCATGCCTGTTTTCTTTCTTCTTTTCGGTGAAATGGTTAATGGGTTTGGCAAGAACCAGATGGATTTGAAGAAAATGACTGAAGAAGTATCAAAGTATGCTCTGTATTTTGTGTACCTAAGTTTTAGATCGAACCTTCAGACTGTCTTCTCCCACTTCGCCGGAACCTTCTTCCATCATTGTCGGAGGAGCTTCACCGTTAGACCTCTGTCATTTCTGCTCGGGGATTGA 381 0.4436 MVEVAEPKAVAEAEKKKEQSLPFYQLFSFADKYDWLLMISGSLGAIVHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTEEVSKYALYFVYLSFRSNLQTVFSHFAGTFFHHCRRSFTVRPLSFLLGD 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00478 126 PANTHER ABC TRANSPORTER B FAMILY 7 96 IPR039421 -
Accr6g00478 126 SUPERFAMILY ABC transporter transmembrane region 26 113 IPR036640 GO:0005524|GO:0016020
Accr6g00478 126 Gene3D ABC transporter type 1, transmembrane domain 10 118 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00478 Accr-Chr6 9611558 9611938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00478 7 88 Calmodulin-binding Proteins AT2G36910 50.602 1.82e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00478 K05658 - cave:132180674 158.688