Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00474 ATGAACGTTGTTCGCAACACTACCAATAATAATACCATCAACAACCATAATCAAGCTTGTGCTGCTTGTAAATACCAACGTAAGAAGTGTGCTCCTGACTGTATTCTCGCTCCTTATTTCCCTCACGATCGCCAACGTCAATTCCTCAACGCGCATAGATTGTTTGGTGTCCGTAACATCACCAGAATTATTGAAAACTACAACGATCACCTTAGAGACGAAGCCATGAGAAGCATTATTTATCAATCCGACATGCGAGCCGCCGATCCTGTTGGAGGTTGTTATAGACACGTTAAAGAACTCATGGCCCAGATTCAATACCTCGAGGCTGAACTTGTGTTTGTTCGTCAACAACTTGCTGTGTTTCGTGCCCAAGCTCGTCATCATCATCATCCTAATGTTCATGAGATTGTTGATACTACTCCCAATCATTCAAGCTTGTATAGCCCTAATAATGTCATTGCACCGGTCCTATCACCAGTTTCTTATTATCAATACCTTCAACAACAACAAGAACCGATGCATATGGCGGTAGTTAACAACAGTCATCAGGATCATCGCAGAAATAATAATGATAATGACAACGTTCCAAGTAATTTGAACCTGGATGATGTTAATTATTGGCTTGCTCAGGATCCCATGTCCTTGTCGTTCCAGAACAAAAATGGTGGGGGAGAACGTATTGGTTTTGTGGAAGATGAATTGGATAATGACCATAAGCCTTCTTTGTCATCTTTGCTTAACATGGATCGTGATGACAGGTTTTGA 768 0.4128 MNVVRNTTNNNTINNHNQACAACKYQRKKCAPDCILAPYFPHDRQRQFLNAHRLFGVRNITRIIENYNDHLRDEAMRSIIYQSDMRAADPVGGCYRHVKELMAQIQYLEAELVFVRQQLAVFRAQARHHHHPNVHEIVDTTPNHSSLYSPNNVIAPVLSPVSYYQYLQQQQEPMHMAVVNNSHQDHRRNNNDNDNVPSNLNLDDVNYWLAQDPMSLSFQNKNGGGERIGFVEDELDNDHKPSLSSLLNMDRDDRF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00474 255 Coils Coil 98 118 - -
Accr6g00474 255 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 181 - -
Accr6g00474 255 MobiDBLite consensus disorder prediction 236 255 - -
Accr6g00474 255 Pfam Lateral organ boundaries (LOB) domain 19 115 IPR004883 -
Accr6g00474 255 ProSiteProfiles LOB domain profile. 18 119 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00474 Accr-Chr6 9597183 9597950 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00474 18 171 AS2 family AT3G13850 54.430 1.59e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr6g00474 LOB 5.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00474 - - pcin:129289336 295.819