Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr6g00469 | ATGGCTTCGAGTGATGCTGAGGGATTATCTATTCCTATAGACGATTATGAGACTTTGCTTTCCACTACTGATGTTGAGCTGCTCAAGAGAGCATGGCGTAACGAGAAGGCGGCTCCTGACATTCTTCGTTTTGAGACCGATTTGATTGGCCGCATTAGAGAACAGATCCAGTTAATGGAAGAAACAGCGGAGGAGAAATCAGCTGCTGGCGTTGATCCCCTTTCACTATCTCTCTATCAGATGGACTTGGATAGAGCCCAGTTTTTACTTAGATCATACCTTCGGATTCGCATTCAGAAGATTGAAAAGTTTGTGTTCCACATTGCGAAAACTGAGGAACTTTGGAACAAGCTATCGAGAGAAGAGAAAAATTTCGCTAGAAGGTGTACCGAAGATCTAAAACAACACTTGGAGGATAGTGTTCTATCAAAGCTGCCTGAAAATTATCAATCTTTCCAAAAGCAATCTGTGATAAGCGAAGAGGATGACATGATTCCAGAAGCACAACTAGACACATTTGTTGTATGCAGAAGCAAAGAATATCTCACAGGCATCCAGCTTGAGGATGGACCAGTGGATGACAGGTCGATGCTGTTTGAGATGGAGCCTGGTGTCCTGTACTTCATATGTTACAAGTCTATAAAGGCACTTGTGGAGAGTGGAAAAATTGATCTTCTCTGA | 681 | 0.4273 | MASSDAEGLSIPIDDYETLLSTTDVELLKRAWRNEKAAPDILRFETDLIGRIREQIQLMEETAEEKSAAGVDPLSLSLYQMDLDRAQFLLRSYLRIRIQKIEKFVFHIAKTEELWNKLSREEKNFARRCTEDLKQHLEDSVLSKLPENYQSFQKQSVISEEDDMIPEAQLDTFVVCRSKEYLTGIQLEDGPVDDRSMLFEMEPGVLYFICYKSIKALVESGKIDLL | 226 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr6g00469 | 226 | FunFam | DNA replication complex GINS protein SLD5 | 11 | 216 | - | - | |
| Accr6g00469 | 226 | Pfam | GINS complex protein | 66 | 123 | IPR021151 | - | |
| Accr6g00469 | 226 | Pfam | DNA replication complex GINS protein SLD5 C-terminus | 169 | 226 | IPR031633 | - | |
| Accr6g00469 | 226 | Gene3D | - | 13 | 216 | - | - | |
| Accr6g00469 | 226 | SUPERFAMILY | GINS helical bundle-like | 21 | 156 | IPR036224 | - | |
| Accr6g00469 | 226 | PANTHER | SLD5 PROTEIN | 13 | 226 | IPR008591 | GO:0006261 | |
| Accr6g00469 | 226 | CDD | GINS_B_Sld5 | 170 | 226 | IPR031633 | - | |
| Accr6g00469 | 226 | SUPERFAMILY | PriA/YqbF domain | 170 | 226 | - | - | |
| Accr6g00469 | 226 | PIRSF | GINS_Sld5 | 1 | 226 | IPR008591 | GO:0006261 | |
| Accr6g00469 | 226 | CDD | GINS_A_Sld5 | 24 | 142 | IPR038749 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr6g00469 | 1 | 173 | Core DNA Replication Machinery Family | AT5G49010 | 61.850 | 1.42e-68 | 207 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr6g00469 | K10735 | - | qsa:O6P43_008399 | 378.252 |