Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00467 ATGAACATTTCACAACGCAACACCACCCACAACCACGACATCATTAACAACAACAACAACCAGGCTTGTGCTGCATGCAAATACCAACGTAAAAAATGTGCTCCTGACTGTATTCTCGCACCTTATTTTCCTCACGACCGCCAACGTCAATTTCTCAACGCCCATAAATTGTTTGGGGTCAAAAAGATCATAAAAAGTATCAAGCACCTTGACCCCCACTCTAAGGACGAGACCATGGGATCGATTATAATTCAATCGGACATGCGAGCTAATGACCCTGTTGGAGGATGTTACAGATACATTCAAAATCTTGAATCTCAAGTAAGATATTACGAGGCCGAGCACAAGCATGTTCTTCAAAAGCTTGCTTTTTTAAGATCTCAGGTTCATTATCATCATCATCATCCTGATCATTTGAATCATGTTCATAATAAAAACCCTATTACACCAGCAACCACTCATTATCAATACCTTCAATTTCAACACCAACAACAACTTCCATGTCAACAACAAGAACAACAACAACAAGAGCCGCTGCCGTACATGGTTCATCAAATGGAACATCAGAGTAGTAATGTGGTTCATCAAATGGAACATCAGAGTAGTAATGTGTCTCTTCAGGATGATGTCAGTGCTTCTTGGGCTTCTGTACAGGACTCCATGTCTTGGCCGTCTTTATCGTTACAGAACAACAAGAATGGTGGTGGGGTTGGGGATGGTATAAGTGGTGGCGTATATATAAGTGATGAATTATGTAACGATCAAAAGTCTTCGTCAATGCCTTTGCTTAACCTTCATTGTGATGATGAGAGGAATGAAATCGGTTTTGAAACTCAACAATTAGTGGATCGCAGTGATGAAGGCGTTTTGTTTAAGACAGAGAATGCAGTAACAAAAGCAGAGGCCGATGATGACTGCATTCAGCAAGATCAAGATCATGATCTCAAAGGTGCTGCAACTTTGTTCACTCTCACAAACTGTACTACCTGA 990 0.4081 MNISQRNTTHNHDIINNNNNQACAACKYQRKKCAPDCILAPYFPHDRQRQFLNAHKLFGVKKIIKSIKHLDPHSKDETMGSIIIQSDMRANDPVGGCYRYIQNLESQVRYYEAEHKHVLQKLAFLRSQVHYHHHHPDHLNHVHNKNPITPATTHYQYLQFQHQQQLPCQQQEQQQQEPLPYMVHQMEHQSSNVVHQMEHQSSNVSLQDDVSASWASVQDSMSWPSLSLQNNKNGGGVGDGISGGVYISDELCNDQKSSSMPLLNLHCDDERNEIGFETQQLVDRSDEGVLFKTENAVTKAEADDDCIQQDQDHDLKGAATLFTLTNCTT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00467 329 ProSiteProfiles LOB domain profile. 21 122 IPR004883 -
Accr6g00467 329 Coils Coil 101 121 - -
Accr6g00467 329 Pfam Lateral organ boundaries (LOB) domain 22 117 IPR004883 -
Accr6g00467 329 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 19 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00467 Accr-Chr6 9496509 9500185 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00467 21 139 AS2 family AT3G13850 63.025 1.37e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr6g00467 LOB 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00467 - - gmx:100786728 240.35