Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00446 ATGAGTGAAGAGGATCTGAGTTTTACCACTATAATTATGGATTCTTCTTTTCTCATGGGTAGTACAATTTCAGAACCTCGTGATGATATGGAATTTGAATCGCATGAAGCTGCCTATGCATTTTATAAGGAGTATGCTAAGTCTGTGGGGTTTGGCACTGCCAAGTTGAGCAGTCGTCGGTCTAGAGCATCAAAAGAATTTATAGATGCCAAGTTTTCATGTATAAGATATGGTAATAAACAGCAATCTGATGATGCAATTAATCCTCGCCCATCTCCAAAAATTGGTTGTAAAGCAAGCATGCATGTGAAAAGAAAACCAGATGGCAAGTGGTATGTCTATAGCTTTGTGAAAGAGCATAATCATGAGCTTTTACCTGCTCAGGCTCATTTTTTCAGGAGCCATAGGAGTAGTGATCCACTTGGTAATGATGTTCGGATGCGAAGGCGGAAGAATTTAACTGCAGTTTCCAAATTGTTTAATGCGTATCAAAATGTTGATTTTTTGGAGAACTTTTTGAGAAATCTAAATGATAAGGGACGGAGTCTAGTTCTGGAAACTGGGCAAGCTCAATTGCTTCTTGAACTCTTCATGCACATGCAGGAAGAAAATCCAAAATTCTTCTACGCCGTTGATTTAAATGAAGAGCATCGACTGAGAAATGTGTTCTGGGTTGATGCCAAAGGTGTGGAAGATTATACTTACTTTGGTGATGTTGTTTCTTTTGACACAACATATTTCACCAGCAAGTATAAAATACCGTTGGTACTTTTCATTGGAGTAAACCATCACATGCAACCCACATTGCTTGGTTGTGCATTGATTGCTGATGAAACCAACTACACTTTTGCTTGGTTACTGCAAACATGGTTAATTGCAATGGGGGGACGAGCTCCACAAGTGATTCTTACTGATCAAAATGAGGCCATGAAAACAGCTGTTGCTGCAGTTCTTCCTGGTACACGTCATTGTTTTTGTTTGTGGCATATTTTGGAAAAGATACCCAGACAGCTTGAATTTTTAGGTGCATGGCATGGTAATTTTATGGAAAAATTTGACAAATGTATATATAAATCATGGACAGAGGAACAATTTGAAAAGAGATGGTGGAAGCTGGTTGATAAGTTTAATTTGAGAGATGTTGAATGGGTCCGATCCTTATACAATGATCGGACACGTTGGGTGCCAACTTTTATGAGAGAGATCTCTTTTGTTGGACTGTCCACTAGTTCCACTAGTTCTCGTTTCGAAAGTTTAAGTGCTTTGTTTGACAAATATGTCCAGTGTGATACTTCATTGAGAGAATTTATAGAGCGGTACAAAATGATTCTTGAAGAAAGGTATGAAGAAGAAGCCAAAGCAAATTTTGATGCCTGGCATGAAACGCCAGAATTAAAATCTCCTTCACCATTTGAGAAACAAATGTTATACATCTACACTCACGAAATTTTTAAGAAGTTCCAAGTTGAAGTTCTGGGCGCAGCTGCTTGCCATCTTAAAATGGAAAATGATGGTATGACCGCAACATATACTGTGAAGGATTTTGAAGATGATCAAAATTATGTGGTTGAGTGGAACAAATCTAACTCAGACATATGTTGCTCATGCCGCTCATTTGAATATAAAGGTTACCTTTGCAGACATGCTATTGTTGTTTTGCAAATGTCTGGGGTTTTCTGCATACCACCCAAGTATGTGTTGCAACGATTGACAAATGCTGCTATGAGCAAGCATCCTATTAGTGAAAGATTAGATGAGGTGCAATCTAAGGTCCGACGGCTCAATGATTTATGTAGACGGGCCATAATATTGGGTGAAGAAGGTTCTTTGTCCCAAGAAAGTTACTATATTGCTTTAGGTGCCATAAAAGAAGCCTCAAAGCAATGCACAAACATGAACTCTGTTGAGAATGATGCAAGACCTGATTCCCTAGTTACTCAAGTCTGCATTGTTGAAGAGGAGCATCAACCTGGTAATGCTTATAACAAGAAAGTTCCTGATCCAAGGATGACTACTGGTAATAAGCCTGCAAGGACTGCTGGGGCTGCTAGGGAAGTAGGAAGTGCGGAAAATACTGAAGGGAATAAAGGGAAGGTATCTCAAATAGAAGCGGTGGGAAGCCAAGATGGTTTTCACCAAATGGAACTGACAGATATGAGGCAACATAATGTCATGCCTATGCAGTTTCACAATATGGTGCCTTCTCTGTTCCATACATCAACACAGTATCATAACGCAGCTTCAACTCACTTGCCCGAGAATTGCCTTCCTCGTTAG 2277 0.3948 MSEEDLSFTTIIMDSSFLMGSTISEPRDDMEFESHEAAYAFYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRKPDGKWYVYSFVKEHNHELLPAQAHFFRSHRSSDPLGNDVRMRRRKNLTAVSKLFNAYQNVDFLENFLRNLNDKGRSLVLETGQAQLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDAKGVEDYTYFGDVVSFDTTYFTSKYKIPLVLFIGVNHHMQPTLLGCALIADETNYTFAWLLQTWLIAMGGRAPQVILTDQNEAMKTAVAAVLPGTRHCFCLWHILEKIPRQLEFLGAWHGNFMEKFDKCIYKSWTEEQFEKRWWKLVDKFNLRDVEWVRSLYNDRTRWVPTFMREISFVGLSTSSTSSRFESLSALFDKYVQCDTSLREFIERYKMILEERYEEEAKANFDAWHETPELKSPSPFEKQMLYIYTHEIFKKFQVEVLGAAACHLKMENDGMTATYTVKDFEDDQNYVVEWNKSNSDICCSCRSFEYKGYLCRHAIVVLQMSGVFCIPPKYVLQRLTNAAMSKHPISERLDEVQSKVRRLNDLCRRAIILGEEGSLSQESYYIALGAIKEASKQCTNMNSVENDARPDSLVTQVCIVEEEHQPGNAYNKKVPDPRMTTGNKPARTAGAAREVGSAENTEGNKGKVSQIEAVGSQDGFHQMELTDMRQHNVMPMQFHNMVPSLFHTSTQYHNAASTHLPENCLPR 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00446 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 21 631 IPR031052 GO:0006355
Accr6g00446 758 MobiDBLite consensus disorder prediction 659 698 - -
Accr6g00446 758 Pfam SWIM zinc finger 522 555 IPR007527 GO:0008270
Accr6g00446 758 SMART 26again6 532 559 IPR006564 GO:0008270
Accr6g00446 758 Pfam MULE transposase domain 239 332 IPR018289 -
Accr6g00446 758 Pfam FAR1 DNA-binding domain 41 126 IPR004330 -
Accr6g00446 758 ProSiteProfiles Zinc finger SWIM-type profile. 521 557 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00446 Accr-Chr6 9028521 9031089 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr6g00446 MULE 3.9e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00446 - - gmx:100805273 1212.21