Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00445 ATGGCGGTTTTTGCTACTTCTTCCCATGTTCCTCGAGAAAGATATGATGTTTTTATCAGTTTTCGAGGTTCAGACATTAGACATGGATTTCTAAGCCATTTGACAAAGCAATTACGGCAAGAGAGGATAGATGTGTATGTGGATGAGAGGCTAGAGAGGGGAGAAGAAATATCATCTGCGCTTCTTGAAGCAATAGAAAGATCAACAATTGCGTTGGTGATATTCTCAAAAGACTACGCTTCTTCAAGGTGGTGCTTGGAAGAGCTGGTGAAAATCATGAAATGCAAGGAAGTCAATAGTCAGATTGTAATTCCAATTTTCTATAATATTGACCCATCCCACGTCAGGCATCAAGAAGGAACATATGCAGATGCATTTGCTCAACATGAGCAAAAGTTCGAAGATGACTTATTACGAATTTGGAGATCTGTCTTGAAAGAAACAGCTCACTTATCTGGTTATCATTCATCAAATATTACCGATGAATCTGATCTTATTGATCAAATAATCAAAGACGTGTGGAAAAAATTGGAAGATAAAAGCACAATTGAGCCGAAGCGCCTCATGATTGGATTTGAGAAAAATTTGACTACTATTGAATCATTTATGAAAGTTGACTCACAAGAAGTCGGAGTTCTTGGGATTTGGGGTAAAGGAGGGATGGGTAAAACAACATTAGCTCAAGTCGTATTTGACAAATTTTCCCACCAATTTGATAGTTCTTATTTCGCATCAAATGTGAGAGAGGAGTCAAAAAAGCTCGGATTGACTTGTTTGCTTGAAAAAATACTCTCTGTACTACTAAACGACAAAAATCTCACACTGAAAGGAAGACCCAACGCTCAAAGGAGGCTACGCCGAGCAAGAGTCCTTCTAGTGCTTGATGATGTAGACACCTCTAGGCAATTAAAGTATCTCATTGAAGAAAATCTTTCATTGGGGCCGAGTAGCAAAGTGATCATAACAAGTAGAGACAGACATGTTTTGGTTAGTGGAGGAGTTCATGTAGTACATGAGGTGGAAGAATTACATGAGGAAGAGTCACTCCAACTTTTCTGTTGGCATGCTTTCAAGCAAGCCTATCCCAAAGTGGGATATGAAAAGTTATCAATGCAGGCAATTCAATATGCTGGAGGCCTTCCTCTAGCATTACAAGTCTTGGGTTCATATTTGAACTCCAGAGATACAAAAACATGGGATAGTGCCCTTAAGAAATTCAGAAAGCATTCTAATGTGGAAGTTCAAAATGTATTGAGGGTGAGTTTTGATGGACTTGACATACCAGAAAAGAGGATATTTTTAGACATTGCATTCTTCTTTAGAGGAGAAAAGAAAGAAGATATCATAAGGATGCTAGATGCTTGCGATGATTTCTACACAGATTGTGGAATAGATAACCTCATAGATAAAGCTCTCATAACCATTTCAAGAGGCGATACAGTAGAAATTCATGATTTACTACAAGAAATGGCTGAAGATATAGTCCGTGAGGAGTCTATTGGAGATCCTGGAAGACGAAGCCGATTAAATGATGCAAAGGAAATTCAAGATATCTTGAAACATAACAAGGGAACGGATGCAATTGAAGGCATTATATTGGAGTTTGAAATTCTACACTTGAGCGCTAAATCTTTCCAGGATATGAGTAATTTAAGATTTCTCAAGATTCAATCTCCTCGATTGAAGATTGGATATGATTATGATGAAGATCCTGCTACCATTTATTTTCATCCTTGGTTTCTTAATGGTCTGAACTCACTTTCAAATAAAGTAAGGTATTTTTATTGGGATGAATATCCTTTCGAGGCTCTACCATTGGGTTTTTGCCCAGAAAAACTTGTTGAAATCCATTTGCGGACTAGCGATATAAAAAAACTATGGAATGGTGTGCAGGATCTAATGAATTTGAAGATAATAAATCTCAGCTTCTCCGATAAGTTAAAGGAGTTGCCTGATTTATCCAAGGCATGTAACCTTGAGATAGTGGACCTCCAATGTTGTAGTAATTTGCGTAGTATTCATCCATCCATCTTATCTCTCCCTAAACTTGTTTCTTTGAATCTAAGCCATTGCTTCAAGCTAACGAATCTTCATGGGGAAAATCATTTGAAATCTCTCAAGCATCTCACGCTGGATTATTGCACAAGACTCAAGGAATTTTTGTTATCATCAGAAGAAATGAGAAGTTTAGATTTAGTTGAAACTAGCATCAAAACATTGAACTTGCCAATTGGTCGGTTCAATAAACTAGAAGATCTAACTCTCGGTCAGCCTCTCGAGAGTTTTCAAATAAATGAGCTAAGTTGTTTGACATCTCTTAAAAAATTCTCTCTTTCTCATTTTAGAGGAGTACTTGAAAAATCAGAATTACACATTCTGTTTGATGCCTGGCCTTCTTTAGAAGAATTGCATTTGACATACTGTGAGGTTTTAGAGATCCCTGAAAATATCAGTAGCTTGTCGTTGTTGAAGATTCTATCACTACGAGGAAGCGGCATAAAGAGTCTCCCTCATAGCATCAAGCATCTTTCAGAGCTGAAACAAATTGATTTGCGTGAATGCAGGTGGCTTAGAACCTTACCAGAACTTCCATCATCCATTACTCATTTTTATGTAAGTGAATGCACATCATTGGAGACCATGGATTTCACACTGATGAGAGCAATACATAACAACGCTGGTGAGGTTAAAGTTTGTTACCCAGGAAGCACAATTCCAAAGGGCTTCAAATATTGTCAGACGGGGAAGAATTCCATTACTATTGAGCTTGCGCCACCTTCTTCTTCTGACCAATTGTTGGGTTTTGTTTGTTGTTGTATTCTTCCTGCATACCCCAGATTTGTCTCTAGCGGCTCTTACTTTGCAATTTGCAGAAAATTCCACTTTGAAGATGATGAGATCAATTACAAGGATGAAAAGGAATTCCCTCTCCTCGGGTGTCTGCTGAGAGATCATGTTTTTGTATGGTATGATCCAATGGAACAAATATTAAAGGGAACTCAAAGACGGAGATATGACAAGGGCACCACTTACAAGTTTGCATGTGAATTTTTCATCAGTTGGGTTGATGGTCGTTGGGACCATCTTGATCACTTGATAGAAGTGTGCGGACTTTGCCCAACATATGCATCAGAATTACAAGTGACAGTTCAACAAATGGAATTAAAGCTGGAGGTGGGTACAGAAATAGAGATGCCAAAACCAAAGAACTTTATTCAAAGTCTTGGGATCGCGTGCTGCATCATGCCCTGTTACATTTGCCAATTGCTTCTTTGTTCTAAATCGTTCTCAACAAGATTTTAA 3303 0.3812 MAVFATSSHVPRERYDVFISFRGSDIRHGFLSHLTKQLRQERIDVYVDERLERGEEISSALLEAIERSTIALVIFSKDYASSRWCLEELVKIMKCKEVNSQIVIPIFYNIDPSHVRHQEGTYADAFAQHEQKFEDDLLRIWRSVLKETAHLSGYHSSNITDESDLIDQIIKDVWKKLEDKSTIEPKRLMIGFEKNLTTIESFMKVDSQEVGVLGIWGKGGMGKTTLAQVVFDKFSHQFDSSYFASNVREESKKLGLTCLLEKILSVLLNDKNLTLKGRPNAQRRLRRARVLLVLDDVDTSRQLKYLIEENLSLGPSSKVIITSRDRHVLVSGGVHVVHEVEELHEEESLQLFCWHAFKQAYPKVGYEKLSMQAIQYAGGLPLALQVLGSYLNSRDTKTWDSALKKFRKHSNVEVQNVLRVSFDGLDIPEKRIFLDIAFFFRGEKKEDIIRMLDACDDFYTDCGIDNLIDKALITISRGDTVEIHDLLQEMAEDIVREESIGDPGRRSRLNDAKEIQDILKHNKGTDAIEGIILEFEILHLSAKSFQDMSNLRFLKIQSPRLKIGYDYDEDPATIYFHPWFLNGLNSLSNKVRYFYWDEYPFEALPLGFCPEKLVEIHLRTSDIKKLWNGVQDLMNLKIINLSFSDKLKELPDLSKACNLEIVDLQCCSNLRSIHPSILSLPKLVSLNLSHCFKLTNLHGENHLKSLKHLTLDYCTRLKEFLLSSEEMRSLDLVETSIKTLNLPIGRFNKLEDLTLGQPLESFQINELSCLTSLKKFSLSHFRGVLEKSELHILFDAWPSLEELHLTYCEVLEIPENISSLSLLKILSLRGSGIKSLPHSIKHLSELKQIDLRECRWLRTLPELPSSITHFYVSECTSLETMDFTLMRAIHNNAGEVKVCYPGSTIPKGFKYCQTGKNSITIELAPPSSSDQLLGFVCCCILPAYPRFVSSGSYFAICRKFHFEDDEINYKDEKEFPLLGCLLRDHVFVWYDPMEQILKGTQRRRYDKGTTYKFACEFFISWVDGRWDHLDHLIEVCGLCPTYASELQVTVQQMELKLEVGTEIEMPKPKNFIQSLGIACCIMPCYICQLLLCSKSFSTRF 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00445 1100 SMART till_3 14 151 IPR000157 GO:0007165
Accr6g00445 1100 Gene3D - 342 426 IPR042197 -
Accr6g00445 1100 Gene3D - 12 174 IPR035897 -
Accr6g00445 1100 ProSiteProfiles TIR domain profile. 13 177 IPR000157 GO:0007165
Accr6g00445 1100 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Accr6g00445 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 436 IPR027417 -
Accr6g00445 1100 Gene3D Ribonuclease Inhibitor 533 723 IPR032675 -
Accr6g00445 1100 Gene3D Ribonuclease Inhibitor 724 893 IPR032675 -
Accr6g00445 1100 Pfam TIR domain 15 185 IPR000157 GO:0007165
Accr6g00445 1100 Gene3D - 175 336 IPR027417 -
Accr6g00445 1100 SUPERFAMILY L domain-like 483 882 - -
Accr6g00445 1100 FunFam Disease resistance protein (TIR-NBS-LRR class) 344 426 - -
Accr6g00445 1100 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 179 - -
Accr6g00445 1100 PRINTS Disease resistance protein signature 212 227 - -
Accr6g00445 1100 PRINTS Disease resistance protein signature 377 391 - -
Accr6g00445 1100 PRINTS Disease resistance protein signature 841 857 - -
Accr6g00445 1100 PRINTS Disease resistance protein signature 284 298 - -
Accr6g00445 1100 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 721 IPR044974 GO:0006952
Accr6g00445 1100 Pfam C-JID domain 900 1046 IPR045344 -
Accr6g00445 1100 Pfam NB-ARC domain 207 414 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00445 Accr-Chr6 8997232 9000921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00445 15 881 WRKY Transcription Factor Family AT4G12020 31.532 1.41e-97 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00445 - - pcin:129311144 1184.09