Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00437 ATGGCTGAAGATATAGTCTGTGAGGAGTCAGTTGGAGATCCTGGAAGACGAAGTCGATTAAATGATGCAAAGGAAATTCAAGATATTTTGAAAAATAACAAGGGAACGGATGCAATTGAAGGCATTATATTAGAGTTTGAAATTCTACACTTGAGCACTAAATCTTTCCAGGATATGAGTAATTTAAGATTTCTCAAGATCCAATCTCCTCGATTGAAGATTGGATATGATTATGACGAAGATCGTGCTGCCATTTATTTTCATCCTTGGTTTCTTAATGGTCTAAACTCACTTTCAAATAAAGTAAGGAATTTTTATTGGGATGAATATCCTTTCGAGGCTCTACCATTGGGTTTTTGTCCAGAAAAACTTGTTGAAATCCATTTGCGGACTAGCAATATAAAAAAACTATGGAATGGTGTGCAGGATCTAATGAATTTGAAGATAATAAATCTCAGCTTCTCCGATAAGTTAAAGGAGTTGCCTGATTTATCCAAGGCATGTAACCTTGAGATACTGGACCTCCAATGTTGTAGTAATTTGCGTAGTATTCATCCATCCGTCTTATCTCTCCCTAAACTTGTTTCTTTGAATCTAAGCCATTGCTTCAAGCTAACGAATCTTCATGGGGAAAATCATTTGAAATCTCTCAAGCATCTCAAGCTGAGTTATTGCACAAGACTCAAGGAATTTTTGTTATCATCAACAGAAATGAGAAGTTTAGATTTATCTGCCACTGGCATCAAAACATTAAACTTACCAGTTGATCGGTTCAATAAAGTAGAAGATCTGACTCTCGGTCAGCCTCTCGAGAGCTTTCAAATAAATCAGCTAAGTTGTTTGACATCTCTTAAAAAATTCTCTCTTTCTTATTTTAGAGGAGTACTTGAAAAATCAAAATTAGACATTCTGTTTGATGCCTGGCCTTCTTTAGAAGAATTGCATTTGACATACTGTGAGGTTTTAGAGATCCCTGAAAATATCAGTAGCTTGTCGTTGTTGAAGATTCTATCACTACGAGGAAACGGCATAAAGAGTCTCCCTCATAGCATCAAGCATCTTTCAGAGCTGAAACAAATTGATTTGCGTGAATGCAGGTGGCTTAGAACCTTACCAGAACTTCCATCTTCCATTACTCATTTTTATGTAAGTGAATGCACATCATTGGAGACCATGGATTTCACACTGATGAGAGCAATACATAACAACGCTGGTGAGGTTAAAGTTTGTTACCCAGGAAGCACAATTCCAAAGGGCTTCAAATATTGTCAGACGGGGAAGAATTCCATTACTATTGAGCTTGCGCCACCTTCTTCTTCTGACCAATTGTTGGGTTTTGTTTGTTGTTGTATTCTTCCTGCATTCCGCGGATTTGTCGATAGCTCTGGCTTTACAATTTGCAGAAAATTCCACTTTGAAGATGATGGGATCAATTACAAGGATGAAATTGAATTCCCTCGCCTCGAGAACATGAAGAGAGATCATGTTTTTGTGTGGTATGATCCAATGGAACAAATATTAAGGGGAACTCAAAGACGGAGATATGATGAGGGCACCACTTCTAAGTTTGCATTATCAGTTGGGTTGACCGTCGTTGGGACGATCTTGATGACTTGA 1617 0.3772 MAEDIVCEESVGDPGRRSRLNDAKEIQDILKNNKGTDAIEGIILEFEILHLSTKSFQDMSNLRFLKIQSPRLKIGYDYDEDRAAIYFHPWFLNGLNSLSNKVRNFYWDEYPFEALPLGFCPEKLVEIHLRTSNIKKLWNGVQDLMNLKIINLSFSDKLKELPDLSKACNLEILDLQCCSNLRSIHPSVLSLPKLVSLNLSHCFKLTNLHGENHLKSLKHLKLSYCTRLKEFLLSSTEMRSLDLSATGIKTLNLPVDRFNKVEDLTLGQPLESFQINQLSCLTSLKKFSLSYFRGVLEKSKLDILFDAWPSLEELHLTYCEVLEIPENISSLSLLKILSLRGNGIKSLPHSIKHLSELKQIDLRECRWLRTLPELPSSITHFYVSECTSLETMDFTLMRAIHNNAGEVKVCYPGSTIPKGFKYCQTGKNSITIELAPPSSSDQLLGFVCCCILPAFRGFVDSSGFTICRKFHFEDDGINYKDEIEFPRLENMKRDHVFVWYDPMEQILRGTQRRRYDEGTTSKFALSVGLTVVGTILMT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00437 538 Pfam Leucine Rich Repeat 123 142 IPR011713 -
Accr6g00437 538 Gene3D Ribonuclease Inhibitor 234 403 IPR032675 -
Accr6g00437 538 Gene3D Ribonuclease Inhibitor 42 233 IPR032675 -
Accr6g00437 538 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 241 386 IPR044974 GO:0006952
Accr6g00437 538 Pfam Leucine rich repeat 309 365 IPR001611 GO:0005515
Accr6g00437 538 Pfam C-JID domain 411 509 IPR045344 -
Accr6g00437 538 SUPERFAMILY L domain-like 48 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00437 Accr-Chr6 8661963 8663788 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00437 2 392 WRKY Transcription Factor Family AT4G12020 33.333 5.12e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00437 - - pcin:129311144 521.546