Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00429 ATGGCGGGTTTTGCTACTTCTTCCCACGTTCCTCGAGAAAAATACGATGTTTTTATTAGTTTTAGAGGTTCAGACATTAGACATGGATTTCTAAGCCATTTGACAAAGCAGTTACGGCAAGAGAGGATAGATGTGTATGTGGATGAGAGGCTAGAGAGGGGAGATGAAATATCATCTGCGCTTCTTGAAGCAATAGAAAGATCAACAATTGCGCTGGTGATATTCTCAAAAGACTACGCTTCTTCAAGGTGGTGCTTAGAAGAGCTAGTGAAAATCATGAAATGCAAGGAAGTCAATAGTCAGATTGTAATTCCAGTTTTCTATAATATTGACCCATCATATGTCAGGCATCAAGAAGGAACCTATGCAGATGCATTTGCTCAACATGAGCAAAAGTTCGAAGATGACTTATTGCAAATTTGGAGATCTGTCTTGAAAGAAGCAGCAAACTTATCTGGTTATCATTCATCAAATATTACCAATGAATCTGATCTTATTGATCTAATAATCAAAGACATGTGGAATAAATTGGAAGATAAAAGCACACTTGAGCCGAAGCGCCTCATGATTGGATTTGAGAAAAATTTGACTACTATTGAATCATTTATGAAAGTTAACTCACAAGAAGTCAGAGTTCTTGGGATTTGGGGTAAAGGAGGGATGGGTAAAACAACATTGGCTCAAGTCGTATTTGACAAATTTTCCCGACAATTTGATAGTTCTTATTTTGCATCAAATGTGAGAGAGGAGTCGAAAAAGCTTGGATTGACTTGTTTGCTTGAAAAAATACTCTCTGTACTACTAAATGACAAAAATTTCACACTGAAAGGAAGATCCAACACTCAAACGAGGCTACGTCGAGCAAGAGTCCTTCTAGTGCTTGATGATGTAGACACCTCTAGGCAATTAAAGTATATAATTGAAGAAAATCTTTCATTGGGACCGAGTAGCAAAGTGATCATAACAAGTAGAGACAGACATGTTTTGATTAGTGGAGGAGTTCATGTAGTACATGAGGTGGAAGAATTAAATGAGGAAGAGTCACTTCAACTTTTTTGTTGGCATGCTTTCAAGCAAGCCTATCCCAAAGTGGGATATGAAAAGTTATCAGTGCAGGCAATTCAATATGCCGGAGGCCTCCCTCTAGCGTTACAAGTCTTAGGTTCATATTTGAACTCCAGAGATACAAAAACATGGGATAGTGCCCTTAAGAAATTCAAAAAGCATCCCAATGTAGAAGTTCAAACTGTATTGAGGGTTAGTTTCGATGGACTTGATATACCAGAAAAGAGGATATTTTTAGACATTGCATTCTTCTTTAGAGGAGAAAAGAAAGAAGATACTATAAGGATGCTAGATGCTTGTGATGATTTCTACACAGATTGTGGAATAGATAATCTCATAAATAAAGCTCTCATAACCATTTCAAGAGACAATACAGTAGAAATTCATGATTTACTACAAGAAATGGCTGAAGATATAGTCCGTGAGGAGTCTATCGGAGATCCTGGAAAACGAAGCCGATTAAATGATACAAAGGAAATTCAAGATGTACTGAAAAATAACAAGGGAACCGATGCAATTGAAGGCATTACATTGGAGTTTGAAATTCCACACTTGAGCGCTGAATCTTTCCAAGAAATGAGTAATTTAAGATTTCTCAAGATCCAATCTCCTCGATTGAAGATTGGATATGATTTTTCCAAAGATCCTGAAGTCATTTGTTATCCTAATAGTTATTTTCTTCATGGTCTGAACTCACTTTCAAATAAACTAAGGTATTTTTATTGGGAACTATATCCTTTCAAGTCTCTACCATTGGGTTTTTGTCCAGAAAAACTTGTTGAAATCCATTTGCAGACTAGCGAAATAAAAAAACTATGGAATGGTGTGCAGGATCTAATGAATTTGAAGATAATAAATCTCCGCTACTCAATGAAGTTAAAGGAGTTGCCTGATTTCTCCAAGGCATGTAACCTTGAGATAGTGGACCTCACAGGTTGTTTTGATTTGCGTAGTATTCATCCATCCATCTTATCTCTCCCTAAACTTGTTTCTTTGAATCTAAGCGAATGCTATAAGCTAAAGAATCTTCACGGAAAAAATCATTTGAAATCTCTCAAGCATCTCACACTGAAAGATTGCGAAAGACTCAAGGAATTTTTGTTATCATCAGAAGAAATGAGAAGTTTAGATTTAGCTGCTACTAGAATCAAAACATTGAACTTGCCAGTTGGACGGTTCAATAAACTAGAAGATCTAACTCTCGGTCGGCCTCTTGAGAGCTTTCAAATAAATGAGCTAAGTTGTTTGACATCTCTTAAAAAATTCTCTCTTTCTTATTTTAGAGGAGTACTTGAAAAATCAAAATTACACATTCTGTTTGATGCCTGGCTTTCTTTAGAAGAATTGCGTTTGACATACTGTGAGGTTTCAGAGATCCCTGAAAATATCAGTAGCCTGTCGTTGTTGAAGATTCTATCACTACGAGGATGCCACATAGAGAGTCTCCCTCATAGCATCAAGCATCTGTCAGAGCTGAAACAAATTGATTTGCGTGAATGCAGGTGGCTTAGAACCTTACCAGAACTTCCATCTTCCATTACTCATTTTTATGTAAGTGAATGCATATCATTGGAGACCATGGATTTCACACTGATGAGAGCAATATCTAACAACGCTGGTGAGGTTAAAGTTTGTTACCCAGGAATTACAATTCCAAAGGGCTTCAAAGATTCTCAGACGGGGAAGAATTCCATCACTATTGAGCTTGCACCACCTTCTTCTTCAGACCATTTGTTGGGTTTTGTTTGTTGTTGTATTCTTTCTGGAAACATCAACTTTGGCCCTTTGTCTCTCGATTGCGTGGCAATTAGCAGAAAATTCCACTGTGAAGATGATGAGATCAATTACAAGGATGAAAAGGAATTCCCTCACCTCTGGAGAACACAGAGAGATAACGTTTTTGTATGGTATGATCCAATGGAACAGACATTAAAGGGAACTCAAAGACGGAGATATGATGAGGGCACCACTTATAAGTTTGCATGTGAATTTTTCATTACTCACTGTAGACATCGGGGCAATGATTTTGATCCCTTCATAAAAGCGTGCGGACTTTGCCCAATATATGCATCAGAATTACAAGAGACAGTTCAACAAATGGAATTAAAGCTGGAGATGGGTACAGAAATAGAGATGCCAGAATCATTCAACGTTTTTCAAAGATTGAGGAACTTGAGTTGGATGCCCAGCTTTTTGAGAAACGCTTGA 3273 0.3737 MAGFATSSHVPREKYDVFISFRGSDIRHGFLSHLTKQLRQERIDVYVDERLERGDEISSALLEAIERSTIALVIFSKDYASSRWCLEELVKIMKCKEVNSQIVIPVFYNIDPSYVRHQEGTYADAFAQHEQKFEDDLLQIWRSVLKEAANLSGYHSSNITNESDLIDLIIKDMWNKLEDKSTLEPKRLMIGFEKNLTTIESFMKVNSQEVRVLGIWGKGGMGKTTLAQVVFDKFSRQFDSSYFASNVREESKKLGLTCLLEKILSVLLNDKNFTLKGRSNTQTRLRRARVLLVLDDVDTSRQLKYIIEENLSLGPSSKVIITSRDRHVLISGGVHVVHEVEELNEEESLQLFCWHAFKQAYPKVGYEKLSVQAIQYAGGLPLALQVLGSYLNSRDTKTWDSALKKFKKHPNVEVQTVLRVSFDGLDIPEKRIFLDIAFFFRGEKKEDTIRMLDACDDFYTDCGIDNLINKALITISRDNTVEIHDLLQEMAEDIVREESIGDPGKRSRLNDTKEIQDVLKNNKGTDAIEGITLEFEIPHLSAESFQEMSNLRFLKIQSPRLKIGYDFSKDPEVICYPNSYFLHGLNSLSNKLRYFYWELYPFKSLPLGFCPEKLVEIHLQTSEIKKLWNGVQDLMNLKIINLRYSMKLKELPDFSKACNLEIVDLTGCFDLRSIHPSILSLPKLVSLNLSECYKLKNLHGKNHLKSLKHLTLKDCERLKEFLLSSEEMRSLDLAATRIKTLNLPVGRFNKLEDLTLGRPLESFQINELSCLTSLKKFSLSYFRGVLEKSKLHILFDAWLSLEELRLTYCEVSEIPENISSLSLLKILSLRGCHIESLPHSIKHLSELKQIDLRECRWLRTLPELPSSITHFYVSECISLETMDFTLMRAISNNAGEVKVCYPGITIPKGFKDSQTGKNSITIELAPPSSSDHLLGFVCCCILSGNINFGPLSLDCVAISRKFHCEDDEINYKDEKEFPHLWRTQRDNVFVWYDPMEQTLKGTQRRRYDEGTTYKFACEFFITHCRHRGNDFDPFIKACGLCPIYASELQETVQQMELKLEMGTEIEMPESFNVFQRLRNLSWMPSFLRNA 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00429 1090 Gene3D Ribonuclease Inhibitor 527 724 IPR032675 -
Accr6g00429 1090 ProSiteProfiles TIR domain profile. 13 177 IPR000157 GO:0007165
Accr6g00429 1090 Pfam NB-ARC domain 201 414 IPR002182 GO:0043531
Accr6g00429 1090 PRINTS Disease resistance protein signature 284 298 - -
Accr6g00429 1090 PRINTS Disease resistance protein signature 212 227 - -
Accr6g00429 1090 PRINTS Disease resistance protein signature 842 858 - -
Accr6g00429 1090 PRINTS Disease resistance protein signature 377 391 - -
Accr6g00429 1090 Gene3D - 184 334 IPR027417 -
Accr6g00429 1090 Gene3D - 12 183 IPR035897 -
Accr6g00429 1090 Gene3D - 342 426 IPR042197 -
Accr6g00429 1090 Gene3D Ribonuclease Inhibitor 725 893 IPR032675 -
Accr6g00429 1090 Pfam TIR domain 14 184 IPR000157 GO:0007165
Accr6g00429 1090 FunFam Disease resistance protein (TIR-NBS-LRR class) 344 426 - -
Accr6g00429 1090 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 179 - -
Accr6g00429 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 436 IPR027417 -
Accr6g00429 1090 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 154 IPR035897 -
Accr6g00429 1090 Pfam C-JID domain 902 1048 IPR045344 -
Accr6g00429 1090 SUPERFAMILY L domain-like 483 879 - -
Accr6g00429 1090 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 724 IPR044974 GO:0006952
Accr6g00429 1090 SMART till_3 14 151 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00429 Accr-Chr6 8470940 8474596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00429 15 882 WRKY Transcription Factor Family AT4G12020 30.778 1.07e-95 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00429 - - pcin:129311144 1201.81