Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00420 ATGGGTGCTTCAGGAAGATGGTTTAAATCCCTCATTTCTCATAAAAGGCCCTCCTCAAATGACCCTGTTGGCGAGAAGAGTAAGAAGAAATGGAGGCTATGGAGAAGTTCTTCAGAAGGTTTTGGATTTGGGTCCTCCACGAAAAACATGAAGAAGGGACGCGATGTTGCATCAGAGAGGTCTGATTCATCTACGTTTGTTGTGGATGATGAACTTGCTTCTGCCATGGCTACTGTGGCAATCCGAGCTGCTCCTAAAGATTTCATGCTAATCAAGCAGGAATGGTCTGCGATTCGCATTCAATCTGTGTTTCGAGGTTTCTTAGCTAGAAGAGCTTTGAGGGCATTGAAGGCAGTGGTGAGGCTGCAAGCAATATTTAGAGGAAGGAAAGTAAGAAAGCAAGCAGCAATAACACTAAGGTGCATGCATGCTCTTGTTAAAGTTCAGGCACGTGTGAGGGCTATGAATGTAAGGATGTCTCCAGAAGGGAAGGCTGTTCAGAAATTATTAGATTATTATCGCAGACAAGCTGCTGATCCTGTTAAGCAGGCTGAGGAAGGATGGTGTAACATTCCAGGAACTGTAGATGAGGTTAAAGCAAAGATACAAATGAAGCAAGAGGCAGTCATCAAAAGGGAGAGAGCTATGTCTTATTCTTTCTCTGCTCAGTCAAGAGTGGCCGGTAGTCCAAAATCAAGAGGCAGAAAGATAGTGAACAAGAGCTTGTTAGAGCAATGGATGACAGTGAAGCCATGGGAAAGCAGGTTGATGGAAGAAGAAGGTACCTATTATGAATCACCTGAAATTACTCCTTTATCCATGAAAACCAATGACTTTGTTGACGAACAAATCAAAGCAAGAAGGAATGGTATGACCACAACTATTTTCAATGGCTCTCTTATAACAAGTCAATCGACTCTGACATCATTATCTTCAACCTCGAGTTCTGAATGCTGCACATTTGATGATAGCCCTGAATCATCAACTTCATACTCATGCACTTCCATATCGCAATCTGTGCCGTTTAGCAGCAATATTATTCTTCAGGAGGAAACAAGAGGGAGAAGGACATTTAATAGACCTAGCTATATGAATCTGACAGAGTCAACAAGGTCCAAACAAAGAGCTTGTGGTTATGTTATGAACATGAGTGGGGATTGTAGAAGCATTTGTTCTGGTTCTGATCCTTGTGCTAATTTGTGGAAAGGTGTATGTGCAACACCTGAAAGGTTGTCTTACCAAAAGAGAAATTTTGGGAAACAACAAAGGTTGGCTTAG 1278 0.421 MGASGRWFKSLISHKRPSSNDPVGEKSKKKWRLWRSSSEGFGFGSSTKNMKKGRDVASERSDSSTFVVDDELASAMATVAIRAAPKDFMLIKQEWSAIRIQSVFRGFLARRALRALKAVVRLQAIFRGRKVRKQAAITLRCMHALVKVQARVRAMNVRMSPEGKAVQKLLDYYRRQAADPVKQAEEGWCNIPGTVDEVKAKIQMKQEAVIKRERAMSYSFSAQSRVAGSPKSRGRKIVNKSLLEQWMTVKPWESRLMEEEGTYYESPEITPLSMKTNDFVDEQIKARRNGMTTTIFNGSLITSQSTLTSLSSTSSSECCTFDDSPESSTSYSCTSISQSVPFSSNIILQEETRGRRTFNRPSYMNLTESTRSKQRACGYVMNMSGDCRSICSGSDPCANLWKGVCATPERLSYQKRNFGKQQRLA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00420 425 MobiDBLite consensus disorder prediction 1 31 - -
Accr6g00420 425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 136 IPR027417 -
Accr6g00420 425 Gene3D - 91 142 - -
Accr6g00420 425 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Accr6g00420 425 SMART iq_5 115 136 IPR000048 GO:0005515
Accr6g00420 425 SMART iq_5 92 114 IPR000048 GO:0005515
Accr6g00420 425 MobiDBLite consensus disorder prediction 38 57 - -
Accr6g00420 425 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Accr6g00420 425 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Accr6g00420 425 Pfam IQ calmodulin-binding motif 117 134 IPR000048 GO:0005515
Accr6g00420 425 PANTHER IQ-DOMAIN 5-RELATED 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00420 Accr-Chr6 8104836 8107314 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00420 1 401 IQD Protein Family AT1G72670 42.227 1.67e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00420 - - ahf:112710157 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00420 6 8104836 8107314 Accr7g00563 7 7910526 7915170 CCT