Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00419 ATGGGTGCTTCAGGAAGATGGTTTAAATCCCTCATTTCTCATAAAAGGCCCTCCTCAAATGACCCTGAGAAGGTTGGCGAGAAGAGTAAGAAGAAATGGAGGCTATGGAGAAGTTCTTCAGAAGGTTTTGGATTTGGGTCCTCCACGAAAAACATGAAGAAGGGACGCGATGTTGCATCAGAGAGGTCTGATTCATCTACGTTTGTTGTGGATGATGAACTTGCTTCTGCCATGGCTACTGTGGCAATCCGAGCTGCTCCTAAAGATTTCATGCTAATCAAGCAGGAATGGTCTGCGATTCGCATTCAATCTGTGTTTCGAGGTTTCTTAGCTAGAAGAGCTTTGAGGGCATTGAAGGCAGTGGTGAGGCTGCAAGCAATATTTAGAGGAAGGAAAGTAAGAAAGCAAGCAGCAATAACACTAAGGTGCATGCATGCTCTTGTTAAAGTTCAGGCACGTGTGAGGGCTATGAATGTAAGGATGTCTCCAGAAGGGAAGGCTGTTCAGAAATTATTAGATTATTATCGCAGACAAGCTGCTGATCCTGTTAAGCAGGCTGAGGAAGGATGGTGTAACATTCCAGGAACTGTAGATGAGGTTAAAGCAAAGATACAAATGAAGCAAGAGGCAGTCATCAAAAGGGAGAGAGCTATGTCTTATTCTTTCTCTGCTCAGTCAAGAGTGGCCGGTAGTCCAAAATCAAGAGGCAGAAAGATAGTGAACAAGAGCTTGTTAGAGCAATGGATGACAGTGAAGCCATGGGAAAGCAGGTTGATGGAAGAAGAAGGTACCTATTATGAATCACCTGAAATTACTCCTTTATCCATGAAAACCAATGACTTTGTTGACGAACAAATCAAAGCAAGAAGGAATGGTATGACCACAACTATTTTCAATGGCTCTCTTATAACAAGTCAATCGACTCTGACATCATTATCTTCAACCTCGAGTTCTGAATGCTGCACATTTGATGATAGCCCTGAATCATCAACTTCATACTCATGCACTTCCATATCGCAATCTGTGCCGTTTAGCAGCAATATTATTCTTCAGGAGGAAACAAGAGGGAGAAGGACATTTAATAGACCTAGCTATATGAATCTGACAGAGTCAACAAGGTCCAAACAAAGAGCTTGTGGTTATGTTATGAACATGAGTGGGGATTGTAGAAGCATTTGTTCTGGTTCTGATCCTTGTGCTAATTTGTGGAAAGGTGTATGTGCAACACCTGAAAGGTTGTCTTACCAAAAGAGAAATTTTGGGAAACAACAAAGGTTGGCTTAG 1284 0.4213 MGASGRWFKSLISHKRPSSNDPEKVGEKSKKKWRLWRSSSEGFGFGSSTKNMKKGRDVASERSDSSTFVVDDELASAMATVAIRAAPKDFMLIKQEWSAIRIQSVFRGFLARRALRALKAVVRLQAIFRGRKVRKQAAITLRCMHALVKVQARVRAMNVRMSPEGKAVQKLLDYYRRQAADPVKQAEEGWCNIPGTVDEVKAKIQMKQEAVIKRERAMSYSFSAQSRVAGSPKSRGRKIVNKSLLEQWMTVKPWESRLMEEEGTYYESPEITPLSMKTNDFVDEQIKARRNGMTTTIFNGSLITSQSTLTSLSSTSSSECCTFDDSPESSTSYSCTSISQSVPFSSNIILQEETRGRRTFNRPSYMNLTESTRSKQRACGYVMNMSGDCRSICSGSDPCANLWKGVCATPERLSYQKRNFGKQQRLA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00419 427 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Accr6g00419 427 MobiDBLite consensus disorder prediction 16 33 - -
Accr6g00419 427 MobiDBLite consensus disorder prediction 1 33 - -
Accr6g00419 427 SMART iq_5 94 116 IPR000048 GO:0005515
Accr6g00419 427 SMART iq_5 117 138 IPR000048 GO:0005515
Accr6g00419 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 138 IPR027417 -
Accr6g00419 427 PANTHER IQ-DOMAIN 5-RELATED 1 378 - -
Accr6g00419 427 Pfam IQ calmodulin-binding motif 119 136 IPR000048 GO:0005515
Accr6g00419 427 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Accr6g00419 427 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Accr6g00419 427 Gene3D - 93 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00419 Accr-Chr6 8104836 8107314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00419 1 403 IQD Protein Family AT1G72670 42.130 1.66e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00419 - - ahf:112710157 374.015