Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr6g00416 | ATGGGTGTTGGAGCTTCATCTTCTTCTTCAAAGAAATATGAAGTGTTTTTGAGTTTCAGGGGAGAGGATACTCGTAGATCCTTCACCAGTCATCTCCATACAGCGTTACTCCTCAAAGGTATTGAGACTTTCATTGATTATGATCTCCCAAAAGGGAACGACATCTCCCAATCACTCATCCAAGCAATTCAAGATTCATCTTTGTCTGTGATCGTCTTCTCTGAAAACTATGCCTCCTCCAAATGGTGTTTGAATGAGCTCATTGAGATCCTTCGATGTAAAGAGAAGGGACAGCTTGTTGTTCCTATATTCTACCAAGTGGACCCATCTCATGTACGCCATCAAAGGGGAGCTTATGAGGAAGCATTTGCACAACATTTGAAGAAAAACCCAGACAAGGTGGCTGAGTGGAGAAAAGCCCTTTTTGAAACTGCAAGTTTAGCTGGATGGAACTCTTGCACTTACAGGGATGAAGCAGAACTCATTCAAGAAATTGTTAGTGACATTGTAAAAAAGCTAAACCATGGGTCCTCAAGTGCACCAGCGAATATTGTTGGAATTGACAAGAATTGTGATGATATTGAACTCTTGCTAGAAGGATTCTCAAGGATTGGAATTTGGGGCATGGGCGGGATAGGCAAAACAACCATGGCTAAGGTTGTGTTTGCCAAATTCCGCTCTCAATTTGACAGTAGCTACTTCTTGGAAAATTTTAGAGAAGAGGAAGAAAAGCATGGGCGAAAATATATATGTGATAAACTTGTCAATGAACTATCAAACGATGGATCTCTTAAAGGGCTTAGTCGTAGAAAGGTTTTGATTGTACTTGATGATGTCAGTGACACAAGTCATTTAGATTATTTGGAAAATGAAGTTGCTCCTTTTATTAGACTTGGTAGTAAAGTCATCATAACAAGTAGAGAAAGACATGTCCTTGAAGGAAGAGTTGAAAGAATACATGAAGCCATAGCATTAGGCCATGACAATTCTCTTAAGCTTTTCAACCTCGAAGCCTTCCGCAAAGACAATAATAATAGTGAATATAAAGAACTAGTTGAAAGAGCAGTTGCTTATGCCGGAGGTGTTCCATTAGCCTTAACCGTGTTGGGTTCATATCTTCATTCCAAAACTATAAAAGAATGGGAAAGTGCATTGAGCAAATTAGAAAGGATGACCCATCAAAATATTCAAAATGTGTTAAAATTAAGCTATGATAGACTTGATGATGAAGAGAAAGAGGTATTTTTAGACATTGCTTGTTTTTTCAAGGGTGAATCTGAAGGATATGTATTGGCAATGCTAGAGAGCTTTGGCTTTCATGGACACATTAGTTTGAGAAACCTTGCGGACAAGGCACTGATAAGTGTTGTTCATGATACAATATGTATGCAAAATCATGTTACGGTACGGATGCATGATTTAATTCAAGCAATGGCTTTTGAAATTGTTCGCCAAGAGTGTCGAACAAATCCTGAAAGACGTAGTCGACTATGGAATCCTGATGAGATCTATGATGTACTAAAATATAATCGGGGAAGTGATACAATTCAAGGCATAAGTTTAAATATGTCTCAAATTAGAGACTTACAATTGAGCACTGATACCTTTAAAAAGATGACTAAGTTAAGGTTTCTGAAATTCTATTCATCTTGGGGTCAAAGATCGTGCACTGTGAATCTTCCTTATGGGTTTGACTCATTTTCCGAGTCATTACGTTATCTTCAATGGGACAACTTTCCTTCAGAATCTCTACCATTGTCATTTTGTGCTGAGAAGATAGTTGGACTTCACATGCCTAAAAGCCACCTTAAAAAACTATGGGATGGCGTGCAGAACTTGGTGAATTTAAGGGAAATAAGTCTTGAAGGATCCAAATATTTGACGGAGTTGCCTGATATTTCAACAGCTCAAAATCTTGAACGGCTTGATCTTGAGAGTTGTGAAAGTTTAAGTCATATTGATCCTTCGATTTTATGTCTTCCAAGATTGCATAAAGTGTCTGTAAGAGATTGCAGAAGCCTAAAGAGTTTGAAATCTGAGCGTCATTCAGAATCTGTCGCAATCTTAGATTTCCTCGGTTGCTCTAGCCTCAAGGAATTTTCGTTCTCTTCAAGCAAAATTGGTGTTTTATATTTGGCGACTTCACCTATTGAGATATTGGACTTTCCAATTGGGCATATGGAGAAGCTTCAGGACTTCGATCTTACCTGCTCAAAACTAAAGAATCTTCCAATTGATGACATGACTTGTTGCATGAGATCTCTTACGCAGCTCCGTCTTTTTGATTGCGGTGGAATGATTGACAAATCAAAGCTCCATACCTTATTTGATTCTTTGTTATCTCTACGATCAATTCATTTGATTGGGGCATGCGAATTAACTGAACTTCCACAAAATATCAAACATCTCTCAAAGCTATCATGGCTTATCGTAAGCAATTGTAAGAGCCTTCAATCTTTACCAGAGCTTCCTCCATCTATTAGAGATTTAAATGCCCGCGACTGCACATCATTAAAGACACTACAACTCACTTCTCATATTGAAGCTTCCTCAGTTAGTTATCTCAGACGTCTTAGCGAACTTATTCTTTGTGGATGTGAACAATTGTATGAACTCCCTGAATCCATTGGCTCCTTATTCTCATTACATATATTGGATTTGAGAGGAAGTAATATAGAGAGCCTGCCTGTTAGCATCAAGCATCTTTTACATCTTAGTACAATTAAATTGAGTAATTGTAAAAGACTTCGTTCTTTGCCAGAGTTGCCACTATTCATCTACCGAGTTGATGCTGATGGTTGCATATCACTAGAGATTGTGCGCACTTTAGCAACCGCACCACGTCTGACGTCGCTATTTCTAAAAGATTGCTTGAAATTGGAGAATTCCTATATGGAAAGTGCTTGTTTCCCATTGAAGGAAGCAATCTATGGAGGAAGTTGGAGACGTGAGTTTTGTTACCCAGGGAGAAAAGTTCCGGAATGGTTTAAATCTAATCAGGGAATAGTTGCTTCCAACAATATATCTATTGAGCGGCCTTCAACCACAACCGACCTAATTGGCTTTGTTCTCTGTTCTGTTCTTTCTCACCTTGTTCATGGTGATCACTTGCAGTGCCAACTTTATTATGATGGTAAGAAGTACACATGCTCAGAATTCGAAGGAAGGTGGAAAGATAATGAATTTTATGGAGTGAAGACAAATTTTGATTCACATCATGTTTTTCTTTGGTGTGTTTCTGACATGTTCATAAACTTCGGTAAAACAATGGATGGCCAAAACCCCAATTACAGGCCAAACGTGTCATTTGAATTCTCTGTTGTTACAGGTAGTAAGACTGATAGTGGTAAGACTGATAGTGAGACGGATGGTGAGACGGATGGTGAGATAGATGGTGAGGCTGATAGTGAAATAGATAGTGAGAAGTTTGTTGATGGCGTGATTGAAGCATGTGGAGTTTGCCCAATCTATGCCTCAGAGTATCCCAAATTCATTCAACAAATGGAATTGGAGGCAAACTCGGCTGCCCAAAAAGAGACTTGTCAAGATGATTATGAGAATTTATTTCATGGAATACTAAAATATGCGAATTTCTCATTGAAGACAGGAAAATATGGGAATCTTCAAGGAAGTAATATTCCAGAGTGGTTTACTTACAAAAGTTCGATGGAATCTAGCATTTCATACGTGACTAGCAGTTTATACGTGAGAGTTCAGGTTGCTCCAGATTTGGACAAATTGATGGGTTTCATTTTCGGCTTTGTTATACCTAATTTCTCCACAAAAGAAAGGGACCAATGTTACTCCACGTTTATGGGTCGCTTGGATTATGAGAGAACTGGTGGCCCAGAATTCTTTGGTCCAAATGGATGGCACTATTCAATGATAAAATCGAGCTCAGATAATGTTTTTTTATGGTATGATCCCTTCCTCAGCGAATGCATACTAAAGCGTCTAAAGAATCTTCGAGGGAGAATAGGTTGTGATACCAAGATTGACCTTACATTTTTTTTTGATCTTGGTTATGGTATGATCGATGATAAAACGGGGGAGATCGATGAGGAAACGGGAGAGATCGATGATGAAAAGAGGGAGATTCGGATTGATAATTGCTTGATCAAAGAATTTGGAGTTCGTCCAATATATATCTCTGAGTACACAAACTTCCTTCAACAAGAAAAAATGAAGGAAGTGAAGGACTCTTCAATTAATCAACCCATTCCCAAGAATTCTGAATCCGGTACATCTGATGATGTCGATGAGTCGCTACTTCTGCTGGCCCTGCGGAATTTTTAA | 4296 | 0.3864 | MGVGASSSSSKKYEVFLSFRGEDTRRSFTSHLHTALLLKGIETFIDYDLPKGNDISQSLIQAIQDSSLSVIVFSENYASSKWCLNELIEILRCKEKGQLVVPIFYQVDPSHVRHQRGAYEEAFAQHLKKNPDKVAEWRKALFETASLAGWNSCTYRDEAELIQEIVSDIVKKLNHGSSSAPANIVGIDKNCDDIELLLEGFSRIGIWGMGGIGKTTMAKVVFAKFRSQFDSSYFLENFREEEEKHGRKYICDKLVNELSNDGSLKGLSRRKVLIVLDDVSDTSHLDYLENEVAPFIRLGSKVIITSRERHVLEGRVERIHEAIALGHDNSLKLFNLEAFRKDNNNSEYKELVERAVAYAGGVPLALTVLGSYLHSKTIKEWESALSKLERMTHQNIQNVLKLSYDRLDDEEKEVFLDIACFFKGESEGYVLAMLESFGFHGHISLRNLADKALISVVHDTICMQNHVTVRMHDLIQAMAFEIVRQECRTNPERRSRLWNPDEIYDVLKYNRGSDTIQGISLNMSQIRDLQLSTDTFKKMTKLRFLKFYSSWGQRSCTVNLPYGFDSFSESLRYLQWDNFPSESLPLSFCAEKIVGLHMPKSHLKKLWDGVQNLVNLREISLEGSKYLTELPDISTAQNLERLDLESCESLSHIDPSILCLPRLHKVSVRDCRSLKSLKSERHSESVAILDFLGCSSLKEFSFSSSKIGVLYLATSPIEILDFPIGHMEKLQDFDLTCSKLKNLPIDDMTCCMRSLTQLRLFDCGGMIDKSKLHTLFDSLLSLRSIHLIGACELTELPQNIKHLSKLSWLIVSNCKSLQSLPELPPSIRDLNARDCTSLKTLQLTSHIEASSVSYLRRLSELILCGCEQLYELPESIGSLFSLHILDLRGSNIESLPVSIKHLLHLSTIKLSNCKRLRSLPELPLFIYRVDADGCISLEIVRTLATAPRLTSLFLKDCLKLENSYMESACFPLKEAIYGGSWRREFCYPGRKVPEWFKSNQGIVASNNISIERPSTTTDLIGFVLCSVLSHLVHGDHLQCQLYYDGKKYTCSEFEGRWKDNEFYGVKTNFDSHHVFLWCVSDMFINFGKTMDGQNPNYRPNVSFEFSVVTGSKTDSGKTDSETDGETDGEIDGEADSEIDSEKFVDGVIEACGVCPIYASEYPKFIQQMELEANSAAQKETCQDDYENLFHGILKYANFSLKTGKYGNLQGSNIPEWFTYKSSMESSISYVTSSLYVRVQVAPDLDKLMGFIFGFVIPNFSTKERDQCYSTFMGRLDYERTGGPEFFGPNGWHYSMIKSSSDNVFLWYDPFLSECILKRLKNLRGRIGCDTKIDLTFFFDLGYGMIDDKTGEIDEETGEIDDEKREIRIDNCLIKEFGVRPIYISEYTNFLQQEKMKEVKDSSINQPIPKNSESGTSDDVDESLLLLALRNF | 1431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr6g00416 | 1431 | Pfam | TIR domain | 12 | 179 | IPR000157 | GO:0007165 | |
| Accr6g00416 | 1431 | Gene3D | Ribonuclease Inhibitor | 767 | 1041 | IPR032675 | - | |
| Accr6g00416 | 1431 | Gene3D | - | 175 | 319 | IPR027417 | - | |
| Accr6g00416 | 1431 | ProSiteProfiles | TIR domain profile. | 11 | 173 | IPR000157 | GO:0007165 | |
| Accr6g00416 | 1431 | MobiDBLite | consensus disorder prediction | 1110 | 1133 | - | - | |
| Accr6g00416 | 1431 | Pfam | C-JID domain | 987 | 1160 | IPR045344 | - | |
| Accr6g00416 | 1431 | SUPERFAMILY | L domain-like | 470 | 920 | - | - | |
| Accr6g00416 | 1431 | Gene3D | - | 6 | 174 | IPR035897 | - | |
| Accr6g00416 | 1431 | Gene3D | - | 324 | 408 | IPR042197 | - | |
| Accr6g00416 | 1431 | PRINTS | Disease resistance protein signature | 203 | 218 | - | - | |
| Accr6g00416 | 1431 | PRINTS | Disease resistance protein signature | 359 | 373 | - | - | |
| Accr6g00416 | 1431 | PRINTS | Disease resistance protein signature | 634 | 650 | - | - | |
| Accr6g00416 | 1431 | PRINTS | Disease resistance protein signature | 266 | 280 | - | - | |
| Accr6g00416 | 1431 | Coils | Coil | 1345 | 1365 | - | - | |
| Accr6g00416 | 1431 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 9 | 175 | - | - | |
| Accr6g00416 | 1431 | Pfam | Leucine Rich Repeat | 596 | 611 | IPR011713 | - | |
| Accr6g00416 | 1431 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 173 | 418 | IPR027417 | - | |
| Accr6g00416 | 1431 | SMART | till_3 | 12 | 147 | IPR000157 | GO:0007165 | |
| Accr6g00416 | 1431 | FunFam | Disease resistance protein RPS4 | 513 | 705 | - | - | |
| Accr6g00416 | 1431 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 13 | 701 | IPR044974 | GO:0006952 | |
| Accr6g00416 | 1431 | Pfam | NB-ARC domain | 203 | 405 | IPR002182 | GO:0043531 | |
| Accr6g00416 | 1431 | Gene3D | Ribonuclease Inhibitor | 509 | 764 | IPR032675 | - | |
| Accr6g00416 | 1431 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 5 | 150 | IPR035897 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr6g00416 | Accr-Chr6 | 8053085 | 8057941 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr6g00416 | 769 | 921 | WRKY Transcription Factor Family | AT4G12020 | 25.989 | 5.49e-06 | 49.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr6g00416 | - | - | pcin:129289344 | 1148.65 |