Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00414 ATGAGTATTCCAACAGGTTTTGAGACAATTTCTACCAAAATAAGGTATTTCCACTGGAAAGGATACCCGGGGAAGTCCTTGCCATCAAATTTTTGTGTTGAGCTTCTTCTTGAACTTAACTTGAAAGAAAGCATGGTTGAAACACTTTGGGAAGGAGTGCAGGATTTAGCGAATTTAAAAAGATTAATACTTCAAGAATGCCGTAACTTGAGGGAGTTACCAGATTTTTCCAAAGCTTGTAGTCTTGAAAGCGTAGATCTGAGTCATTGTGAGCGTTTAAGTGATGTGCATGCATCTCTCCTATCCCTCCACAGTCTCATTTCGTTGAATGTAAGATGCTGCTCTGACCTTAAGAGTCTCAAGAGTAGGTATCATCTAAAATCTCTCAGAGAACTGGACATAGATTACTGCAAGAATCTGAAGGAATTCTCGGTGTCATCAGAAGAACTAACGTCTTTGGATTTGTCCGAGACTTTGATAGAAGAATTGAGCCCATCAATTTGGCTTTGTTCCAAGCTTAGACGTCTCCATCTCTTTGATACAAAATTGCATAATGTTCCTATACAAGAATTAAGTTGCTTGACATTTTTGAAGGAACTCAGTGTTTCTAACCTCCAAAACATTGACAATGTCAGCGTACGTATGCTATTTGATCGTTTACGTAGTCTCCGATCACTGAATCTCATTGAGTGCTGCAACCTAACTGAGTTCCTAGATAACATCACTCAACTCTCCAGTCTGGAAGTGCTTAATTTAGAGGGGTGCTCTGGCCTAACTAAACTCCCCGTCAGTATGAGAGATGTTTCAAAGCTAGAATTTCTCTTGGTACAAGGCTGCACTGCGCTTCGGAGTCTACCGGAACTTCCTCCCTCTCTTGGAGTATTGGATGCTACAGACTGCATATCTTTGGAGACCGTGAACATTTCAACGATTTCAAGCAGACCTTGGAATAATGGTAAAAAGATGTTTTCATTCACCAACTGTGTAAACTTAGATGTGAGCGCCATTGAGGAACAAGCCAAGTACTTGTTACAGAAAGCAGTTGAGGAGAAGGAAGATGTTAAAGTTTGTTACCCAGGAAAGAAGGTTCCAGAGTGGTTTGGAAATAATCGGACCCAAAATGATTCGGATACCGTCAATCTTTCTCTATCTTCTCACACTTTAGAGGGTTTCATTTTTGGCGCCGTCGTTCCTGACTACCTAGGGCTAAAGCTAGAGCACGAATTTCTTCCTCCTGTAATTATCTGCCGCTTTGGAAGCAAAAAAACAGAGCATTTTCTAGCACTTGAGATAGTCAGTACTGGACATGTTATCCTAGGTTCTCCTCCATATTTTGCTGAATGGATACTGCGTGAAATTGAAGAAAACAAAGAAAATCACGAAGCCGCGACTCATAACCCAAATCTTTCCTTCCAATTCCGTATGGGTGGCTTTTTGCCGCCCCCTTTGCCCACTTTTCCCGCCGAAGAGGGTGGAGTGTACCCCATATATGCCTCAGAATGA 1503 0.4165 MSIPTGFETISTKIRYFHWKGYPGKSLPSNFCVELLLELNLKESMVETLWEGVQDLANLKRLILQECRNLRELPDFSKACSLESVDLSHCERLSDVHASLLSLHSLISLNVRCCSDLKSLKSRYHLKSLRELDIDYCKNLKEFSVSSEELTSLDLSETLIEELSPSIWLCSKLRRLHLFDTKLHNVPIQELSCLTFLKELSVSNLQNIDNVSVRMLFDRLRSLRSLNLIECCNLTEFLDNITQLSSLEVLNLEGCSGLTKLPVSMRDVSKLEFLLVQGCTALRSLPELPPSLGVLDATDCISLETVNISTISSRPWNNGKKMFSFTNCVNLDVSAIEEQAKYLLQKAVEEKEDVKVCYPGKKVPEWFGNNRTQNDSDTVNLSLSSHTLEGFIFGAVVPDYLGLKLEHEFLPPVIICRFGSKKTEHFLALEIVSTGHVILGSPPYFAEWILREIEENKENHEAATHNPNLSFQFRMGGFLPPPLPTFPAEEGGVYPIYASE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00414 500 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 218 369 - -
Accr6g00414 500 SMART LRR_CC_2 126 153 IPR006553 -
Accr6g00414 500 SMART LRR_CC_2 244 271 IPR006553 -
Accr6g00414 500 SMART LRR_CC_2 79 106 IPR006553 -
Accr6g00414 500 SMART LRR_CC_2 194 219 IPR006553 -
Accr6g00414 500 Gene3D Ribonuclease Inhibitor 149 355 IPR032675 -
Accr6g00414 500 Gene3D Ribonuclease Inhibitor 2 148 IPR032675 -
Accr6g00414 500 SUPERFAMILY L domain-like 5 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00414 Accr-Chr6 8023876 8025487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00414 1 275 WRKY Transcription Factor Family AT4G12020 29.682 3.03e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00414 - - mtr:25479456 278.485