Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00413 ATGGCAAAGGCTTTGTTTGTCAAGTTAGCTCATCGGTATGACAATTGCTGCTTCTTGGAAAATATAAGGGGAAAAATAGAAAGATATGGATCAGAACATGTATGTAACTCTGTTGTCTTAGAGCTGCTAGGACAAGATATGCACAAGAATTCATCAAATGGTTTAAGCAGCAATGCATTTGTAGCCAGAAGACTTGGTAGTCAAAAAGCTTTCGTTGTGCTTGATGATGTACATGTCAAGAGTTCTAAGCAATTAGAGGATCTGCTGGATGAAATATGCAATTTCTTGGGAGAAGGCAGTAAAGTTCTTATAACAACAAGAGATAAGAAATTATTTCTTGAGGAAAAAGGTTATGAAATACATAAAGCCGAGGGATTGAGTAATGACAATTCACGTTTGTTTTTCATTCACAAGGCCTTTGGATCAAACTATCCCGAATATGGATATGAAGATCGTATAGAAGGGTTTGTCAATTACGCCCAACACAACCCCCTGGCTTTAAAAGTCCTGGGATCATTACTTCGCTCTGTACATGGAAAGGCACGGAATTTGAGCAAAGAAGAAAAAGAAAAGGCTTGGGATTGTTTGTTGAGAAAACTAAGAGCAGGGAATCCTAATAATGAAATTCAAGAGGTGTTGAGATTGAGTTACGATAATGGATTAGACTATACAGAGAAGCAAATTTTTCTAGAGATTGCATGTTTCTTAAAGGGTGAAAGAGAAGAATTTGTAGAAGAGCTATTGGAGAGCTATGAATTCTATCCAACTGTTGGCATACAAACCCTTATAGATAATGCTCTTATCGTTAAGACTGATGGGAAAGTTGAGATGCATGACTTACTACATGAAATGGGTTTACAAATTGTTCGTGAAGAGAGTATCAAGGAGCCTGGAAAAAGAAGTAGATTATGGGATCCCAGTGAAATCTATGATGTATTGAAAAATTGTGAGGGAGAAAAAGAGGTTAAAGGCATAATGTTTGACATATCTAAGATTAAACCTTTAGAATTGACAGCAAAAACCTTTAATAAAATGACGAGAGTAAGATTTCTCAAATTTTGTTCAAGTAATGGTATGAGTATTCCAACAGGTTTTGAGACAATTTCTACCAAAATAAGGTATTTCCACTGGAAAGGATACCCGGGGAAGTCCTTGCCATCAAATTTTTGTGTTGAGCTTCTTCTTGAACTTAACTTGAAAGAAAGCATGGTTGAAACACTTTGGGAAGGAGTGCAGGATTTAGCGAATTTAAAAAGATTAATACTTCAAGAATGCCGTAACTTGAGGGAGTTACCAGATTTTTCCAAAGCTTGTAGTCTTGAAAGCGTAGATCTGAGTCATTGTGAGCGTTTAAGTGATGTGCATGCATCTCTCCTATCCCTCCACAGTCTCATTTCGTTGAATGTAAGATGCTGCTCTGACCTTAAGAGTCTCAAGAGTAGGTATCATCTAAAATCTCTCAGAGAACTGGACATAGATTACTGCAAGAATCTGAAGGAATTCTCGGTGTCATCAGAAGAACTAACGTCTTTGGATTTGTCCGAGACTTTGATAGAAGAATTGAGCCCATCAATTTGGCTTTGTTCCAAGCTTAGACGTCTCCATCTCTTTGATACAAAATTGCATAATGTTCCTATACAAGAATTAAGTTGCTTGACATTTTTGAAGGAACTCAGTGTTTCTAACCTCCAAAACATTGACAATGTCAGCGTACGTATGCTATTTGATCGTTTACGTAGTCTCCGATCACTGAATCTCATTGAGTGCTGCAACCTAACTGAGTTCCTAGATAACATCACTCAACTCTCCAGTCTGGAAGTGCTTAATTTAGAGGGGTGCTCTGGCCTAACTAAACTCCCCGTCAGTATGAGAGATGTTTCAAAGCTAGAATTTCTCTTGGTACAAGGCTGCACTGCGCTTCGGAGTCTACCGGAACTTCCTCCCTCTCTTGGAGTATTGGATGCTACAGACTGCATATCTTTGGAGACCGTGAACATTTCAACGATTTCAAGCAGACCTTGGAATAATGGTAAAAAGATGTTTTCATTCACCAACTGTGTAAACTTAGATGTGAGCGCCATTGAGGAACAAGCCAAGTACTTGTTACAGAAAGCAGTTGAGGAGAAGGAAGATGTTAAAGTTTGTTACCCAGGAAAGAAGGTTCCAGAGTGGTTTGGAAATAATCGGACCCAAAATGATTCGGATACCGTCAATCTTTCTCTATCTTCTCACACTTTAGAGGGTTTCATTTTTGGCGCCGTCGTTCCTGACTACCTAGGGCTAAAGCTAGAGCACGAATTTCTTCCTCCTGTAATTATCTGCCGCTTTGGAAGCAAAAAAACAGAGCATTTTCTAGCACTTGAGATAGTCAGTACTGGACATGTTATCCTAGGTTCTCCTCCATATTTTGCTGAATGGATACTGCGTGAAATTGAAGAAAACAAAGAAAATCACGAAGCCGCGACTCATAACCCAAATCTTTCCTTCCAATTCCGTATGGGTGGCTTTTTGCCGCCCCCTTTGCCCACTTTTCCCGCCGAAGAGGGTGGAGTGTACCCCATATATGCCTCAGAATGA 2577 0.3931 MAKALFVKLAHRYDNCCFLENIRGKIERYGSEHVCNSVVLELLGQDMHKNSSNGLSSNAFVARRLGSQKAFVVLDDVHVKSSKQLEDLLDEICNFLGEGSKVLITTRDKKLFLEEKGYEIHKAEGLSNDNSRLFFIHKAFGSNYPEYGYEDRIEGFVNYAQHNPLALKVLGSLLRSVHGKARNLSKEEKEKAWDCLLRKLRAGNPNNEIQEVLRLSYDNGLDYTEKQIFLEIACFLKGEREEFVEELLESYEFYPTVGIQTLIDNALIVKTDGKVEMHDLLHEMGLQIVREESIKEPGKRSRLWDPSEIYDVLKNCEGEKEVKGIMFDISKIKPLELTAKTFNKMTRVRFLKFCSSNGMSIPTGFETISTKIRYFHWKGYPGKSLPSNFCVELLLELNLKESMVETLWEGVQDLANLKRLILQECRNLRELPDFSKACSLESVDLSHCERLSDVHASLLSLHSLISLNVRCCSDLKSLKSRYHLKSLRELDIDYCKNLKEFSVSSEELTSLDLSETLIEELSPSIWLCSKLRRLHLFDTKLHNVPIQELSCLTFLKELSVSNLQNIDNVSVRMLFDRLRSLRSLNLIECCNLTEFLDNITQLSSLEVLNLEGCSGLTKLPVSMRDVSKLEFLLVQGCTALRSLPELPPSLGVLDATDCISLETVNISTISSRPWNNGKKMFSFTNCVNLDVSAIEEQAKYLLQKAVEEKEDVKVCYPGKKVPEWFGNNRTQNDSDTVNLSLSSHTLEGFIFGAVVPDYLGLKLEHEFLPPVIICRFGSKKTEHFLALEIVSTGHVILGSPPYFAEWILREIEENKENHEAATHNPNLSFQFRMGGFLPPPLPTFPAEEGGVYPIYASE 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00413 858 PRINTS Disease resistance protein signature 64 78 - -
Accr6g00413 858 PRINTS Disease resistance protein signature 600 616 - -
Accr6g00413 858 PRINTS Disease resistance protein signature 160 174 - -
Accr6g00413 858 Pfam NB-ARC domain 28 219 IPR002182 GO:0043531
Accr6g00413 858 Gene3D Ribonuclease Inhibitor 326 505 IPR032675 -
Accr6g00413 858 Gene3D Ribonuclease Inhibitor 506 707 IPR032675 -
Accr6g00413 858 SUPERFAMILY L domain-like 325 667 - -
Accr6g00413 858 Gene3D - 126 221 IPR042197 -
Accr6g00413 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 230 IPR027417 -
Accr6g00413 858 SUPERFAMILY "Winged helix" DNA-binding domain 207 314 IPR036390 -
Accr6g00413 858 Gene3D - 1 117 IPR027417 -
Accr6g00413 858 SMART LRR_CC_2 437 464 IPR006553 -
Accr6g00413 858 SMART LRR_CC_2 484 511 IPR006553 -
Accr6g00413 858 SMART LRR_CC_2 602 629 IPR006553 -
Accr6g00413 858 SMART LRR_CC_2 552 577 IPR006553 -
Accr6g00413 858 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 504 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00413 Accr-Chr6 8022693 8025487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00413 1 696 WRKY Transcription Factor Family AT5G45050 27.801 1.08e-62 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00413 - - pcin:129316033 516.153