Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00408 ATGGGTGTTGCAGCTTCATCTTCTTCTTCGTCTTCAAAGGAATATGACGTGTTTCTAAGTTTCAGGGGAGAGGATACTCGCAAATCCTTCACCAGCCATCTTCATACAGCCTTGTGCCTCAAAGGAATTGAGACATTCATTGATTATGATCTCCCAAAAGGGGATGACATCTCCCAATCACTCATCCAAGCAATTCAAGATTCATCTCTGTCTGTGATCATCTTCTCTAAAAATTATGCCTCCTCCAAATGGTGTTTGAATGAGCTCATTGAGATCCTTCGCTGTAAAGAAGAGCTGGGACAGCTTGTTGTTCCTATATTCTTCCAAGTGGACCCATCTCACGTCCGAAAACAGGAGGGAGCTTATAAGGAAGCATTTGCACAACATTTGGAGAAAAACCCAGACAAGGTGGATGAGTGGAGAAATGCCCTTTCTAAAACTGCAAGTTTATCTGGATGGGACTCTTGCAATTCCAGGGATGAAGCAGAACTCATTCAAAATATTGTCAGTGACATCATGGAAAAACTAAACCATGGGTCTCCAAGTGTATTGGCGAATATTGTTGGAATTGATAAGAATTGTGATCGCATTGAATCTTTGCTCGAAAGATTCTCAAGCATTGGAATTTGGGGCATGGGCGGGATAGGCAAAACAACCATGGTTAAGGTTGTGTTTGCCAAATTCCGCTCTCAATTTGATAGTTGCTGCTTCTTGGAAAATTTTAGAGAAGAGTTAAAAAAGCATGGTCTAAAATATGTACGTGATAAACTTGTCAATGAACTATCAAATGGTAGATCTCTTGAAAGGCTCAGTCGAAGAAAAGTTTTGATTGTACTTGATGATGTCAGTGATACAAAAGAGTTAGATGATTTGGAAAATGAAGCTCCTCGTCTAAGACCTGGTAGTAAAGTCATCATAACAAGTAGAGATAAACATGTACTTAAAGGAAGAGTTGAAACAATACATGAAGCCGTAGCATTGGGCCATGACCATTCTCTCGAGCTTTTCAACCTCAAAGCCTTCCGCAAAGACAGTTATAACACGGAATATAAAGAGCTGGTGGAAAGAGTACTTGCTTATGCCCAGGGTGTTCCATTAGCCTTAACCGTATTGGGTTCATATCTTCATTCTAGACCTATAGAACAATGGGAAAGTGCGTTGATCAAATTAGAAAAGAGGACCCATCGAACTATTCAAGCTGTGTTAGAATTAAGCTATGATGGACTTGATGATGAAGAGAAAGAGGTATTTTTAGACATTGCCTGTTTTTTTAAAGGAGAATCTGAAGGATATGTATTGGCAATGCTAGAGAGCTTTGGCTTTTCTGCGCGCATTAGTTTGGGAATCCTTATGGACAAGGCACTGATAAGTGTTGTTCATGGTATGGGAGGGATGCAAAATCATGTTACAGTACGAATGCATGATTTAATTCAATCAATGGCTTTTGACATTGTTATCCAAGAGTGTCCAACAAATCCTGAAAGACGTAGTCGACTATGGAATTCTGGTGAGATCTATGATGTACTAAAACATAATCGGGGAACTGATGCAATTAAAGGTATAAGCTTAGATTTGTCTCAAATTAGAGATTTGCAATTGAGCGTTGATACCTTTAAAAAGATGACTAAATTAAGGTTTCTGAAATTCCATTCATCTTGGGGTCAAAGATCATGCACTGTGAATCTTTCTTCTGGGTTTGACTCATTTTCTGAGTCATTACGCTATCTTCAATGGGACAATTTTCCTTTAGAATCTCTACCATCATCATTTTGTGCTGAGCAGCTAGTTGAGCTTTACATGCCTAATAGCCACCTTAAAAAACTATGGGATGGCATGCAGAACTTGGAGAATTTGAGAAAAATAAGTCTTCGTGGATGCAAATATTTGATGGAGTTGCCTGATATTTCAACAGCTAAAAATCTTGAACGGCTTTATCTTGAGAGTTGTGAAAGCTTAAATCATATTGATCCTTTGATTTTATCTCTTCCAAGATTGCATGAAGTGTCTGTAAGAGATTGCAAAAGCCTTGAGAGTTTGAAATCTGAGCGTCAGTCAAAATCTATCGCAATCATAGATTTCCGCGGTTGCTCTAGCCTCATGGAATTTTCATTCTCTTCAAACAAAATTGATAGTTTAGATTTATGGCCTTTATCTATTGAGATATTGGACTTTCCAATTGGGCATATGGAGAAGCTTGAGGATTTCACTCTTGACTGCTCAACACTAAAGAATCTTCCAATTGATGACATGACTTGTTACATGAGATCCCTTGTGAAGCTCCGTCTTGATGATCGCGGTGGAATGATTGACAAATCAAAGCTCCATACCTTATTTGATTCTTTGTTATCTCTAGAATCAATTGATTTGAATTGGGCGTGCAAATTAACTGAACTTCCAAATAATATCAAATATCTCTCAAGGCTAAGATCTCTTAACGTAAGCAATTGTAAAAGCCTTCGATCTTTACCAGAGCTTCCTCCATCCATCGAAGTATTAGATGCCCCCGACTGCACATCATTAAAGACACTACAACTCACTTCTCACATTGAATCTTCAATGTTGGCAGATGAAATAATGTTGGGTTCAACTCCCTATTCCTCAGTTAGTTATCTCAGAAATCTTTGGAGGCTTGATCTTTGTGGATGCGAACAATTGTGTGAACTCCCTGAATCCATCGACTCCTTATTCTCATTATGTAAATTGGATTTGAGAGGAAGTAATATAGAGAGCCTGCCAGCTAGCGTCAAGCATCTTTTTTATCTTAATGAAATTAAATTGAGCAATTGTAGAAGACTTCGTTCTCTGCCACAACTACCATTCTCCATCAATACTATTGATGCTGATGGTTGCGTATCACTAGAGATAGTACCAACTTTAGCAAGCGCACCCAATCTGAGGTCCTTACTTCTAAAAGATTGCTTGAAATTGGAGAATAGCTATATGGAAAGTGCCTGTTTCCCATTGAAGGAAGTAATCTACTCAAGTACGATAGTAAGTTCGGAACTATGTAAGTTTTGTTACCCAGGAAGAAAAGTTCCGGAGTGGTTTAAATCTCATCAGAGAATAGATGCTTCCAACAATATATCGATTGATCTGCCTTCAACCACAACCAACCTAATTGGCTTCGTTCTTTGTTCTGTTCTTTCTCACCATGCTCATGGTGATCACTTGCAATGCCAACTTTATTATGATGGTAAGAAGCACACATGCTCAAAATTTAATGCATATGACACACTTTTTGACACATGCTCGGAAGAATTTGGAGGAGTGACGACAAATTTTAATTCACATCATGTTTTTCTATGGTGTGTTGCTGACATGTCCATAAACTCTGGTAAAATAATGGATGGCCAAAACAGCAATTACAGGCCAAACTTGTTATTTGAATTCTCTGTTGTTACAGATAGTGAGAAGTTTGTTGATGGTGTGATTGAAGCATGTGGAGTTTGCCCTATATATGCCTCAGAGTATGGCAAATTCATTCAACAAATGGAATTGGAGGCAAACCTAAGTGCCCAAAAAGAGACTTGTCAAGATGCTGATGAGAATTCATTAAATGGAATACTAAAATATGCTAATTTCTCATTGAAGACAGGAAAATGTGGCAATCTTGAAGGAAGCAATATTCCAGAGTGGTTTGCTTACAAAAGTTCTATGAGAGATGGCGATTTATACGTGAGAGTTCAGCTTGCTCCAGATTTTGACAAACTAATGGGTTTCATTTTCTGCTTTGTTATACCTAATTTCTCCTCAAAAGAAAGGGATCAATGTTACTCCAGATTTGAGGGTCACTTGAACTGTGATGGATATACTGACGGAGCTTTCGGCACAAGTGGAGTGCACTATTCAATGATAAAATTAAACTCCGATAATGTTTTTCTATGGTATGATCCCTTTCTCAGTGAATGCATACTAAAGCGTCTTCGACATATTCGACGGGGAAAAGGTTGTGAAGCCAGGCTTGTCCTTAATTTTTTCTTTAAACTTGGTTATCGTTCGAGCAATAAATGGGGGGAATTTAGGATTGGAAATTGTTTGATCAAAGAAGGTGGAGTTCGTCCAATATATGTCTCTGAGTACACAAACTTCCTTCAGCAAGAAAAACTGAATGAAGTCAAGGACTCTTCAATTGATCAATCTATTCCCGAGAATTCTGAGTCCAGTACATCTCATGATGTTGATGAGTCGCTACTTCTGCTGGCCCTGCGGAATTTTTAA 4218 0.3845 MGVAASSSSSSSKEYDVFLSFRGEDTRKSFTSHLHTALCLKGIETFIDYDLPKGDDISQSLIQAIQDSSLSVIIFSKNYASSKWCLNELIEILRCKEELGQLVVPIFFQVDPSHVRKQEGAYKEAFAQHLEKNPDKVDEWRNALSKTASLSGWDSCNSRDEAELIQNIVSDIMEKLNHGSPSVLANIVGIDKNCDRIESLLERFSSIGIWGMGGIGKTTMVKVVFAKFRSQFDSCCFLENFREELKKHGLKYVRDKLVNELSNGRSLERLSRRKVLIVLDDVSDTKELDDLENEAPRLRPGSKVIITSRDKHVLKGRVETIHEAVALGHDHSLELFNLKAFRKDSYNTEYKELVERVLAYAQGVPLALTVLGSYLHSRPIEQWESALIKLEKRTHRTIQAVLELSYDGLDDEEKEVFLDIACFFKGESEGYVLAMLESFGFSARISLGILMDKALISVVHGMGGMQNHVTVRMHDLIQSMAFDIVIQECPTNPERRSRLWNSGEIYDVLKHNRGTDAIKGISLDLSQIRDLQLSVDTFKKMTKLRFLKFHSSWGQRSCTVNLSSGFDSFSESLRYLQWDNFPLESLPSSFCAEQLVELYMPNSHLKKLWDGMQNLENLRKISLRGCKYLMELPDISTAKNLERLYLESCESLNHIDPLILSLPRLHEVSVRDCKSLESLKSERQSKSIAIIDFRGCSSLMEFSFSSNKIDSLDLWPLSIEILDFPIGHMEKLEDFTLDCSTLKNLPIDDMTCYMRSLVKLRLDDRGGMIDKSKLHTLFDSLLSLESIDLNWACKLTELPNNIKYLSRLRSLNVSNCKSLRSLPELPPSIEVLDAPDCTSLKTLQLTSHIESSMLADEIMLGSTPYSSVSYLRNLWRLDLCGCEQLCELPESIDSLFSLCKLDLRGSNIESLPASVKHLFYLNEIKLSNCRRLRSLPQLPFSINTIDADGCVSLEIVPTLASAPNLRSLLLKDCLKLENSYMESACFPLKEVIYSSTIVSSELCKFCYPGRKVPEWFKSHQRIDASNNISIDLPSTTTNLIGFVLCSVLSHHAHGDHLQCQLYYDGKKHTCSKFNAYDTLFDTCSEEFGGVTTNFNSHHVFLWCVADMSINSGKIMDGQNSNYRPNLLFEFSVVTDSEKFVDGVIEACGVCPIYASEYGKFIQQMELEANLSAQKETCQDADENSLNGILKYANFSLKTGKCGNLEGSNIPEWFAYKSSMRDGDLYVRVQLAPDFDKLMGFIFCFVIPNFSSKERDQCYSRFEGHLNCDGYTDGAFGTSGVHYSMIKLNSDNVFLWYDPFLSECILKRLRHIRRGKGCEARLVLNFFFKLGYRSSNKWGEFRIGNCLIKEGGVRPIYVSEYTNFLQQEKLNEVKDSSIDQSIPENSESSTSHDVDESLLLLALRNF 1405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00408 1405 SUPERFAMILY L domain-like 472 843 - -
Accr6g00408 1405 SMART till_3 14 150 IPR000157 GO:0007165
Accr6g00408 1405 Pfam Leucine Rich Repeat 594 611 IPR011713 -
Accr6g00408 1405 Pfam TIR domain 15 182 IPR000157 GO:0007165
Accr6g00408 1405 Gene3D - 326 410 IPR042197 -
Accr6g00408 1405 PRINTS Disease resistance protein signature 206 221 - -
Accr6g00408 1405 PRINTS Disease resistance protein signature 361 375 - -
Accr6g00408 1405 PRINTS Disease resistance protein signature 803 819 - -
Accr6g00408 1405 PRINTS Disease resistance protein signature 269 283 - -
Accr6g00408 1405 SUPERFAMILY L domain-like 773 1054 - -
Accr6g00408 1405 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 178 - -
Accr6g00408 1405 Coils Coil 1163 1183 - -
Accr6g00408 1405 Pfam NB-ARC domain 206 405 IPR002182 GO:0043531
Accr6g00408 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 420 IPR027417 -
Accr6g00408 1405 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Accr6g00408 1405 Gene3D - 177 322 IPR027417 -
Accr6g00408 1405 Gene3D Ribonuclease Inhibitor 518 687 IPR032675 -
Accr6g00408 1405 Gene3D Ribonuclease Inhibitor 688 856 IPR032675 -
Accr6g00408 1405 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 844 IPR044974 GO:0006952
Accr6g00408 1405 Gene3D Ribonuclease Inhibitor 857 1058 IPR032675 -
Accr6g00408 1405 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 153 IPR035897 -
Accr6g00408 1405 Gene3D - 8 176 IPR035897 -
Accr6g00408 1405 Pfam C-JID domain 1007 1156 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00408 Accr-Chr6 7799656 7804428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00408 871 957 WRKY Transcription Factor Family AT4G12020 33.333 3.35e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00408 - - pcin:129289344 1189.1