Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00407 ATGGGTGTTGCAGCTTCATCTTCGTCTTCCAAGAAACATGAAGTGTTTCTGAGTTTCAGGGGAGAGGATACTTGCAGACCCTTCACCAGTCATCTCCATACAACATTATGCCTCAAAGGTATTGATACTTTCATTGATTATGAGCCCCCGAAAGGGGATGACATCTCCCAGTCACTCATCCAAGCAATTCAAGATTCATCTCTGTCTGTGATCGTCTTCTCTGAAAACTATGCCTCCTCCAAATGGTGTTTGAATGAGCTCATTGAGATCCTTCGATGTAAAAAAGAGAAGGGACAGCTTGTTGTTCCTATATTCTACCAAGTGGACCCATCTCATGTACGCCGTCAGAGTGGAGCATATGAGGAAGCATTTGCACAACATTTGAAGAAAAACCCAGACAAGGTGGATGAGTGGAGAAAAGCCCTCTCTGAAACTGCAAGTTTAGCTGGATGGGACTCCTGCAATTGCAGGGATGAAGCAGAACTTATTCAAAATATTGTCAGTGACATCATAAAAAAACTAAACCATGGGTCCTCAAGTGCTTTGGTGAATATTGTTGGAATTCACAAGAATTGTTCTGCTATTGAATCTTTGCTAGAAGAATTCTCAACCGTTGGAATATGGGGCATGGGCGGGATAGGCAAAACAACCATGGCTAAGGTTGTGTTTGCCAAGTTCCGCCCTCAATTTGACAATTGTTGCTTTTTGGAAAATTTTAGAGAAGAGTCAGAAAAGCATGGTCTAAAATATATACATGATAAACTTGTCAATGAACTATCAAATGATAGATCTCTTGAAGGGCTCAGTCGTAGAAAAGTTTTGATTGTACTTGATGATGTTAGTGACACAAGGCAGTTAGATTATTTGGAAAATGAAGTTGCTCCTTTTATTAGAAGTGGTAGTAAAGTCATCATAACAAGTAGAGATAGGCATGTACTTAAAGTAAGAGTTGATAGAATACATGAAGCCACAGCATTGGGCCATGACAATTCCCTTGAGCTTTTCAACCTCAAAGCCTTCCACAAAGACGGTAATAAAAGTGAGTATAAAGAACTTGTTGAAAGAGCACTTGCTTATGCCCAAGGTGTTCCATTAACCTTAACCGTGTTGGGTTCATTTCTTCATTCTAGAACCATAGAAGGATGGGAAAGTGCGTTGAGCAAATTAGAAAGGAGAACCCATCCAGTTATTCAAGCTGTGTTAAAATCTAGCTATGATGGACTTCTTCATGAAGAGAAAGAGGTATTTTTAGACATTGCTTGTTTTTTTAAAGATAAATCTGAAGAATTTGTGTTGGCAATGCTAGAGAGCTGTGGTTTTCATGCTCACATTATTTTGAGAACTCTTATGGATAAGGCGCTGATAAGGGTTGATCATGGTACGGTATGGATGCATGATTTAATTCAATCAATGGCTTTTGAAATTGTTCGCCAAGAGTGTCTAACAAATCCTGAAAGACGTAGTCGACTATGGAATCCTGATGAGATCTATGATGTTCTAAAACATAACCAGGGCAGTGATGCAATTCAAGGCATAAGTTTAGATTTGTCTCAAATTAGAGATTTACAATTGAGCGCTGATACCTTCAAAAAGATGACTAATTTAAGGTTTCTTAAATTCTATTCATCTTGCGGTCAAAGATCATGCGCTGTGAATCTTCCTTTTGGGCTCGACTCATTTTCCAAGTCATTACATTATCTTCAATGGGACAATTTTCCTTTAGAATCTCTACCATTGTCATTTTGTGCTGAGAAGCTAGTTGAACTTCACATGCCTAATAGCCACCTTAAAAAACTATGGGATGGCGTGCAGGACTTGGTGAATTTAAGAGAAATAAGTCTTCATGGATCCAAATATTTGATGGAGTTGCCTGATATTTCAACGGCTCAAAATCTTGAACGGCTTTATCTTAAGAGTTGTGAAAGTTTAAGTCATATTGATCCATCGATTTTATCTCTTCCAAGATTGGATGATGTGTCCTTAAGTCATTGCAGAAGCCTAAAGAGTTTGAAAATTGAGCATCAGTCAAAATCTATCTGA 2040 0.3853 MGVAASSSSSKKHEVFLSFRGEDTCRPFTSHLHTTLCLKGIDTFIDYEPPKGDDISQSLIQAIQDSSLSVIVFSENYASSKWCLNELIEILRCKKEKGQLVVPIFYQVDPSHVRRQSGAYEEAFAQHLKKNPDKVDEWRKALSETASLAGWDSCNCRDEAELIQNIVSDIIKKLNHGSSSALVNIVGIHKNCSAIESLLEEFSTVGIWGMGGIGKTTMAKVVFAKFRPQFDNCCFLENFREESEKHGLKYIHDKLVNELSNDRSLEGLSRRKVLIVLDDVSDTRQLDYLENEVAPFIRSGSKVIITSRDRHVLKVRVDRIHEATALGHDNSLELFNLKAFHKDGNKSEYKELVERALAYAQGVPLTLTVLGSFLHSRTIEGWESALSKLERRTHPVIQAVLKSSYDGLLHEEKEVFLDIACFFKDKSEEFVLAMLESCGFHAHIILRTLMDKALIRVDHGTVWMHDLIQSMAFEIVRQECLTNPERRSRLWNPDEIYDVLKHNQGSDAIQGISLDLSQIRDLQLSADTFKKMTNLRFLKFYSSCGQRSCAVNLPFGLDSFSKSLHYLQWDNFPLESLPLSFCAEKLVELHMPNSHLKKLWDGVQDLVNLREISLHGSKYLMELPDISTAQNLERLYLKSCESLSHIDPSILSLPRLDDVSLSHCRSLKSLKIEHQSKSI 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00407 679 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 671 IPR044974 GO:0006952
Accr6g00407 679 Gene3D - 177 319 IPR027417 -
Accr6g00407 679 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 176 - -
Accr6g00407 679 Pfam Leucine Rich Repeat 585 604 IPR011713 -
Accr6g00407 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 419 IPR027417 -
Accr6g00407 679 Gene3D - 6 176 IPR035897 -
Accr6g00407 679 Gene3D - 325 408 IPR042197 -
Accr6g00407 679 Gene3D Ribonuclease Inhibitor 500 678 IPR032675 -
Accr6g00407 679 Pfam TIR domain 12 180 IPR000157 GO:0007165
Accr6g00407 679 ProSiteProfiles TIR domain profile. 11 174 IPR000157 GO:0007165
Accr6g00407 679 SUPERFAMILY L domain-like 463 671 - -
Accr6g00407 679 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 151 IPR035897 -
Accr6g00407 679 PRINTS Disease resistance protein signature 267 281 - -
Accr6g00407 679 PRINTS Disease resistance protein signature 360 374 - -
Accr6g00407 679 PRINTS Disease resistance protein signature 651 667 - -
Accr6g00407 679 PRINTS Disease resistance protein signature 204 219 - -
Accr6g00407 679 SMART till_3 12 148 IPR000157 GO:0007165
Accr6g00407 679 Pfam NB-ARC domain 197 407 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00407 Accr-Chr6 7743995 7746534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00407 8 670 WRKY Transcription Factor Family AT4G12020 31.704 2.54e-92 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00407 - - pcin:129287787 832.402