Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00402 ATGGCTTCTTCTTCAAGCTCTGGCTCTGTGCCAAATGCTCCAAGAAAGTATGATGTGTTTATCAGTTTTAGAGGCGAAATCCCCAACAACTTAGCTAGCCATCTTTATACTGCTCTCGAGCGAGCTTTCCTTAAGGTCTTTCGTGATGATAAGAAGCTTGAGACAAGTAATGAAATCAAACCATCACTCAATCAAGCAATCGAGGATTCAAGTGTATCTATAATAGTCTTCTCTGAAGACTATGCTTCCTCAAAATGGTGCCTGGATGAACTTGACCACATCATGCAATTCAGAAAGGATGAGGGCCAGTATGTTATACCCATCTTCTACAAAGTTGACCCCAGAGATGTTCGAAAACAAACCGGAGCTTATAAGAAGGCATTTGAAAAACATGAGATTGATTACCACCCAGAGAGGGTGAAGAGATGGACAGATGCTCTTTACGATGCTGGCAAATTAATCGGCAAGCACTGCCAAACCTCCACGGACGAATCCAATTTAATTAAGGAAATTGTCGCTGATGTCAGCACAAAATTGGAACGTTTGCATAAATGTCAGGGTACATTAAAGGATGCAATTGGAATTGATGAAATTATTAAACCCATTGAAGAGTTATTGGAAAAATTTAACAAAGTTGTAATTTGGGGGATGGGTGGTGTGGGTAAGACCACAATGGCTAAGGCTTTGTTTGTCAAGTTAGCTCATCGGTATGACAATTGCTGCTTCATGGAAAATATAAGGGAAAAAATGGAAAGATATGGATTAGAACATGTATGTAACTCTCTTGTCTCAGAGCTGTTGGGGCAAGATATGCACAAGAATTCATCAAATGCTTTAAGCAGCAATGCATTTGTAGCCAGAAGGCTTGGTAGTAAAAAAGCTTTCGTTGTGCTTGATGATGTACATGTCAAGAGTTCTAAGCAATTAGAGGATCTGCTGGATGAAATATGCAATTTCTTGGGAGAAGGCAGTAAAGTTCTTATAACAACAAGAGATAAGAAATTATTTCTTGAGGAAAAAGGTTATGAAATACATAAAGCCGAGGGATTGAGTAATGACAATTCACGTCAACTTTTCATCCACAAGGCCTTTGGATCAAACCATCCTGAATATGGATATGAAGATCGTATAGAAGGGTTTGTAGATTACACCCAACACAACCCCCTAGCTTTAAAAGTCCTGGGATCATTACTTCGCTCTGTACACGGAAAGGCACGGAATTTGAGCAAAGAAGAAAAAGAAAAGGCATGGGATAGTTTGTTGAGAAAACTGAGAGCAGGGAATCCAAATAACGAAATTCAAGAGGTGTTGATATTGAGTTACAATAATGGATTAGACTATACAGAGAAGCAAATTTTTCTAGACATTGCATGTTTCTTAAAGGGTGAAAGAGAAGAATTTGTAGAAGAGCTATTGGAGAGCTATGAATTCTATCCAATTGTTGGCATACAAACCCTTATAGATAATGCTCTTATCGTCAAGACTGACGGGAAAGTTGAGATGCATGACTTATTACATGAAATGGGTTTACAAATTGTTCGTGAAGAGAGTATCAAGGAACCTGGAAAAAGGAGCAGATTATGGGATCCTAGTGAAATCTATGATGTATTGAAAAATTGTGAGGGAGAAAAAGAGGTTGAAGGCTTAATGTTTAATATATCTGGGATTGGGCCTTTAGAATTGACTGCAAAGACCTTCAATAAAATGACGAGAATAAGATTTCTCAAATTTTATTCAAGTCATGGTATAATTATTCCAACAGGTCTTGAGTCAATTTCTAGCAAAATAAGGTATTTCCACTGGCAAGGATACCCGGGGAAGTCCTTGCCATCAAATTTTTGTGCTGAGCTTCTTCTTGAACTTAACTTGAAAGAAAGCATGGTTGAAACACTTTGGGAAGGAGTTCAGGATTTAGCAAATTTAAGAAGATTAATACTTCAAAAATGCCATAACTTGAGGGAGTTACCAGATTTTTCCAAAGCTTGTAGTCTTGAAAGCGTAGATCTAAGTCATTGTGAGTGTTTAAGTGATGTGCCTGCATCTCTCCTCTCTCTCCACAATCTCATTTCTTTGGATGTAAGATACTGCTATAACCTTAGGAGTCTCAAAAGTAGGATTCATCTAAAATCTCTCAGAGAACTGGAAATACTTGACTGCAAGAATCTGAAGGAATTTTCGGTGTCATCAGAAGAACTAACGTCTTTAAATTTGTCCAAGACTTTGATAGAAGAATTGAGCCCATCAATTGTGCGTTGTTCCAAGCTACGTCAACTCTCTATAGCAGGCTGCACTGTGCTTCGGAGTCTACTGGAACTTCCTCCCTCCCTTAGAGGTTTGTCTGCTGCGGACTGCACATCATTGGAGACTGTGTCCATTTCAACGTTTTCAAGCACACCTCAGAATAGAGGTCACAAGAGCTTTTCATTCGCCAACTGTGTAAACTTAGATGTGAGTGCCATTGAGGAACAAGCCAAGTGCTTGTTACAGAAAGCAGTTCATGAGAAGGAAAATGTTGCAGTTTCTTACCCAGGAAAGAAGGTTCCAGAGTGGTTTGGAAATAATCGAACCCAAAATGATTCGGATACCGTCAATCTTTCTCTATCTTCTCACACTTTAGAGGGTTTCATTTTTTGCGCCGTCGTTCCTGATCTCCCAAAGAAAGTAAAATACCATCCTTTAATTATCTCCAGCCAAAGACAGAACGAAGTATCTGATCGTTTACCATTTCTAAAATTCAATCCTGGAGATGTTCTCCTAGGTTATCCTCCATTTCTACCTGCATCGATTGTGGCTCAAATTGAACGAAACAAAAAAAATCATGAAGCCGCCACTTATAACCCAGATATTTCCTTCAAATTTAGTTTTGTTTCTTATGATCGCCCTTTTCCCCGCAAAGAGGGTGTGTCGTTTCCCACTTTTCCCGCCAAAGAGGGTGGAGTGTACCCCATATATGCCTCAGAACATTTGGAGTTGAACCCTAATTCCAGGAAACGCAAGGCCATAATGATTTAA 3012 0.3918 MASSSSSGSVPNAPRKYDVFISFRGEIPNNLASHLYTALERAFLKVFRDDKKLETSNEIKPSLNQAIEDSSVSIIVFSEDYASSKWCLDELDHIMQFRKDEGQYVIPIFYKVDPRDVRKQTGAYKKAFEKHEIDYHPERVKRWTDALYDAGKLIGKHCQTSTDESNLIKEIVADVSTKLERLHKCQGTLKDAIGIDEIIKPIEELLEKFNKVVIWGMGGVGKTTMAKALFVKLAHRYDNCCFMENIREKMERYGLEHVCNSLVSELLGQDMHKNSSNALSSNAFVARRLGSKKAFVVLDDVHVKSSKQLEDLLDEICNFLGEGSKVLITTRDKKLFLEEKGYEIHKAEGLSNDNSRQLFIHKAFGSNHPEYGYEDRIEGFVDYTQHNPLALKVLGSLLRSVHGKARNLSKEEKEKAWDSLLRKLRAGNPNNEIQEVLILSYNNGLDYTEKQIFLDIACFLKGEREEFVEELLESYEFYPIVGIQTLIDNALIVKTDGKVEMHDLLHEMGLQIVREESIKEPGKRSRLWDPSEIYDVLKNCEGEKEVEGLMFNISGIGPLELTAKTFNKMTRIRFLKFYSSHGIIIPTGLESISSKIRYFHWQGYPGKSLPSNFCAELLLELNLKESMVETLWEGVQDLANLRRLILQKCHNLRELPDFSKACSLESVDLSHCECLSDVPASLLSLHNLISLDVRYCYNLRSLKSRIHLKSLRELEILDCKNLKEFSVSSEELTSLNLSKTLIEELSPSIVRCSKLRQLSIAGCTVLRSLLELPPSLRGLSAADCTSLETVSISTFSSTPQNRGHKSFSFANCVNLDVSAIEEQAKCLLQKAVHEKENVAVSYPGKKVPEWFGNNRTQNDSDTVNLSLSSHTLEGFIFCAVVPDLPKKVKYHPLIISSQRQNEVSDRLPFLKFNPGDVLLGYPPFLPASIVAQIERNKKNHEAATYNPDISFKFSFVSYDRPFPRKEGVSFPTFPAKEGGVYPIYASEHLELNPNSRKRKAIMI 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00402 1003 Gene3D - 349 445 IPR042197 -
Accr6g00402 1003 ProSiteProfiles TIR domain profile. 15 179 IPR000157 GO:0007165
Accr6g00402 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 456 IPR027417 -
Accr6g00402 1003 Pfam TIR domain 16 184 IPR000157 GO:0007165
Accr6g00402 1003 PRINTS Disease resistance protein signature 211 226 - -
Accr6g00402 1003 PRINTS Disease resistance protein signature 288 302 - -
Accr6g00402 1003 PRINTS Disease resistance protein signature 384 398 - -
Accr6g00402 1003 PRINTS Disease resistance protein signature 706 722 - -
Accr6g00402 1003 Gene3D - 183 344 IPR027417 -
Accr6g00402 1003 Gene3D Ribonuclease Inhibitor 526 835 IPR032675 -
Accr6g00402 1003 SUPERFAMILY "Winged helix" DNA-binding domain 432 538 IPR036390 -
Accr6g00402 1003 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 797 IPR044974 GO:0006952
Accr6g00402 1003 Pfam NB-ARC domain 208 443 IPR002182 GO:0043531
Accr6g00402 1003 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Accr6g00402 1003 SUPERFAMILY L domain-like 550 816 - -
Accr6g00402 1003 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 181 - -
Accr6g00402 1003 Gene3D - 14 182 IPR035897 -
Accr6g00402 1003 SMART till_3 16 153 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00402 Accr-Chr6 7431944 7435866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00402 12 788 WRKY Transcription Factor Family AT4G12020 29.433 7.34e-79 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00402 - - pcin:129288608 685.256