Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00394 ATGGCTACAAAGGTGGTTTCGCAAAGGATATCAGACGCTATACGAGATGGAGCTGAAGTATTTTTCAGGACCCAATATGGCTGTATATCCAAGATGGCAATGTTGCTTACTGTGGTGATCCTTTGCATATATTTGTTCGGTACTACAACTCCTCACATGGAGTCTTCTGGCCTGGGAAGGTCTTCTTCTGCGTACATCACAATAGCTGCGTTCATTTTAGGTGCTTTCTGGTGTTGCACCAGGGGGAGTTGGTGCTTGTTATTGAAAAAGGAACAGAGAAAGATAGAAACTCTGATGGCTTCTTCTTCTTCAAGCTCTGGCTCTGTGCCAAATGCTCCAAGAAAGTATGATGTGTTTATCAGTTTTAGAGGTGAAACCCGCAAAAACTTCACTAGCCATCTTCACGCTGCCCTCAGCCGAGCTTCCCTTAAGGTCTTTCGTGATGATAAGAAGCTTGAGACAGGTGATGAAATCGCCCCATCACTCATTCAAGCAATCAAGGATTCAAGTGTATCAGTAATAGTCTTCTCAAAAGACTATGCTTCCTCAAAATGGTGCCTGGATGAACTCCTCCAGATCATGCAATACAGAGAGGATGAAGGCCAGTATGTTATACCCATCTTCTACAAAGTTGACCCCACAGATGTTCGAAACCAAACCGGAGCTTATAAGAAGGCGTTTGTAAAACATGAGATTGATTACCATGATGACCCAGACAGGGTGAACAGATGGAGAGCTGCTCTTTCTAAAGCTGGCAAATTAAGCGGCAAGCACTGCGAAACCTCCACGGACGAATCCAATTTAATTGAGGAAATTGTCGCTGTTGTCGGCACAAAATTGGAACGTTTACATAATTGTCAAGGTACATTGAAGGATGCAGTTGGAATTGATGAAATGGTTAAACCCATTGAAGAGTTATTGGAAAAATTTAACAAAGTTGGAATTTGGGGGATGGGTGGTGTGGGTAAGACCACAATGGCAAAGGCTTTGTTTGCCAAGTTATCTTATCGATATGACAATTGCTGCTTCATGGACAATATGAGGGAAAAAATAGAAAGATATGGATCAGAACATGTATGTAACTCTATTGTCTCAGAGCTGTTGGGGCAAGATAAGCTCAATAATTCATCAGATGCTTTAAGAAGAAATGCATTTGTAGCTAGAAGGCTTGGCAGTATAAAAGCTTTCGTTGTGCTTGATGATGTCAATAGTTCAAAACAATTACAGGATCTGCAGGATAAAATATGCAATTTCTTGGGAGAAGGCAGTAAAGTTATTCTAACAACAAGAGATAAGAAATTGCTTCGGGGAAACGGTTATGAAATCCATGAAGCCGAGGGATTGAGTTATGACAATTCATGTCGACTTTTCATCCGCAAGGCCTTTGGATCAGAACATCCAGAAGATGGATATGAACAGCTCATAACCGGGTTTGTAGATTATACCCAACGCAATCCCCTAGCTCTAGGAGTTCTGGGTTCATATGTTCACTTTGAAGATAAAAAGTTATGGGATGATTTATTGAGAAAATTACGAGCAGGGAGTCCAAATGATGAAATTCAAACGGTGTTAAGAATGAGTTATGATGGATTAGACTATAAAGAGAAGCAAATTTTTCTAGACATTGCATGTTTCTTAAAGGGTGAAAGAGAAGAATTTGTAGAAGAGCTATTAGAGAGCTATGAGTTCTATCCAACTGTTGGCATACAAACCCTTAAAGATAAGGCTCTTATTGTTACGACAAGTAGGAAAGTTCAAATGCATGACTTAATACAGGAAATGGGTTATCAAATTGTTTGTGAAGAGAGTGTCAAGGAACCTGGAAAAAGAAGTAGATTATGGGATCCCCGTGAAATCTATGATGTATTGAAAAATTGTGAGGGAGAAAAAGAGGTTGAAGGCTTAATGTTCGATATATCTAAGATTAGACCTTTAGAATTGACTGCAAAGACTTTTAATCAAATGACGAGAATAAGATTTCTCAAATTTTATTCTTATTCACATTATGGTAATGGTATCAGTATTCCAACAGGTCTTGAGTCAATTTCTACCAAAATAAGGTATTTCCATTGGGAAGGATACCCGGGGAAGTCCTTGCCATCAAATTTTTGTGCTGAACTTCTTCTTGAACTTAACTTGAAAGGAAGCATGGTTGAAACACTTTGGGAAGGAGTGCAGGATTTATCGAATTTAAGAAGATTAATACTTGGAGAGTGCCGTAACTTGAGGGAGTTACCAGATCTTTCCAAAGCTTGTAGTCTTGAAAGCGTAGATCTGAGTTATTGTAAGCGTTTAAATGATGTGCATGCATCTCTCCTATCCCTCCACAAACTAAGGTATTTCCACTGGCAAGGATACCCGGGGAAGTCCTTTCCATCAAATATTTGTGCTGAGCTTCTTCTTGAACTTAACTTGGAAGGAAGCATGGTTGAAACACTTTGGGAAGGAGTGCAGGATTTAGCAAATTTAAGAAGATTAGTACTTGGGGAATGCCGTAACTTGAGGGAGTTACCAGATTTTTCCAAAGCTTGTCGTCTTGAAAGCGTAGATCTGAGTCATTGTGAGCGTTTAAGTGACGTGCATGAATCTCTTCTATCCCTCCACAGTCTCATTGTTTTGGATGTAAGATACTGCTCTGACCTTAAGAGTCTCAAAAGTAGGATTCATCTAAAATCTCTCAGAGAACTGGTTATATTTGGCTGCGAGAATCTGAAGGAATTCTCGGTGTCATCAGAAGAACTAACGTCTTTAAATTTGTCCAAGACTTTGATAGAAGAATGGAGCCCATCAATTGTGCGTTGTTCCAGGCTGAGAGGACTCTATCTGGTTGATACAAAATTGAATAATGTTCCCATACAGGCATTAAGTTGCTTGACATTTCTAGATGGACTCAGTATTTCTAACCTCCAGAACATTGACAATTTCAGCGTACGTATGCTATTTGATTGTTTACGTAGTCTCCAATCAGTGAGTCTCATTGAGTGCTGCAACTTAACTGAGCTCCCAGATAACATCGCCCAACTGTCTGGTCTAGATCGGCTTGATTTAAAGAGGTGCCCTAACCTAACTAAGCTCCCCGTCAGTATGAGAGATCTTTCAAAGCTACAATATCTCTCTGTAGAAGGCTGCACTGCACTTCGGAGTCTACCGGAACTTCCTCCCTCCCTTAGAGAATTGATTGCTATAGACTGCACATCTTTGGAGACTGTGAACATTTCAACGATACCAAGCACACCTTGGGATAAAGGTAGAACAATCTTTTCATTCATCAACTGTGTAAACTTAGATGTGAGCGCCATTGAGGAACAAGCCAAGTGCTTGTTACGGAAAGCAGCTCATGAGAAGGTATGGGTTGCAGTTTCTTACCCAGGAAAGAAGGTTCCAGAGTGGTTTGGAAATAATCGGACCCAAGATGATTCGGATACCGTCAATCTTTCTCTATCTTCTCACACTTTACAGGGTTTCATTTTTTGCACCGTCCTTCCTGACTACCTAGAGCCAGAGAAAGTATTGTCGCGGCCTTCAATTATCTGCTACCTTGGATGGGAAAAAAGAAAAGTAATAAGTGGTCATCTAGCATTTCAGAAAGTCAGAGCTGGACATGTTATCCTCTGTTCTCTTCCAGATCTAGCTAAATCGATACTGGATGAAATTGAAGAAAACAAAGAAAATCATGAAGCCGCCACTTATAACCCAAATTTTCTCTTCCGCTTCAGATTTGGTTATTATGCTCCCAATTTGACCCAAAAAAAATATTATGCTCCCACTATTCTCACTTTTCCCGCCAAAGAGGGTGGAGCGTACCCCATATATGCCTCTCAAGATTCGGAGTTGAACCCTAATTCCAGGAAACGCAAGGCAATAATGATTTAA 3873 0.4036 MATKVVSQRISDAIRDGAEVFFRTQYGCISKMAMLLTVVILCIYLFGTTTPHMESSGLGRSSSAYITIAAFILGAFWCCTRGSWCLLLKKEQRKIETLMASSSSSSGSVPNAPRKYDVFISFRGETRKNFTSHLHAALSRASLKVFRDDKKLETGDEIAPSLIQAIKDSSVSVIVFSKDYASSKWCLDELLQIMQYREDEGQYVIPIFYKVDPTDVRNQTGAYKKAFVKHEIDYHDDPDRVNRWRAALSKAGKLSGKHCETSTDESNLIEEIVAVVGTKLERLHNCQGTLKDAVGIDEMVKPIEELLEKFNKVGIWGMGGVGKTTMAKALFAKLSYRYDNCCFMDNMREKIERYGSEHVCNSIVSELLGQDKLNNSSDALRRNAFVARRLGSIKAFVVLDDVNSSKQLQDLQDKICNFLGEGSKVILTTRDKKLLRGNGYEIHEAEGLSYDNSCRLFIRKAFGSEHPEDGYEQLITGFVDYTQRNPLALGVLGSYVHFEDKKLWDDLLRKLRAGSPNDEIQTVLRMSYDGLDYKEKQIFLDIACFLKGEREEFVEELLESYEFYPTVGIQTLKDKALIVTTSRKVQMHDLIQEMGYQIVCEESVKEPGKRSRLWDPREIYDVLKNCEGEKEVEGLMFDISKIRPLELTAKTFNQMTRIRFLKFYSYSHYGNGISIPTGLESISTKIRYFHWEGYPGKSLPSNFCAELLLELNLKGSMVETLWEGVQDLSNLRRLILGECRNLRELPDLSKACSLESVDLSYCKRLNDVHASLLSLHKLRYFHWQGYPGKSFPSNICAELLLELNLEGSMVETLWEGVQDLANLRRLVLGECRNLRELPDFSKACRLESVDLSHCERLSDVHESLLSLHSLIVLDVRYCSDLKSLKSRIHLKSLRELVIFGCENLKEFSVSSEELTSLNLSKTLIEEWSPSIVRCSRLRGLYLVDTKLNNVPIQALSCLTFLDGLSISNLQNIDNFSVRMLFDCLRSLQSVSLIECCNLTELPDNIAQLSGLDRLDLKRCPNLTKLPVSMRDLSKLQYLSVEGCTALRSLPELPPSLRELIAIDCTSLETVNISTIPSTPWDKGRTIFSFINCVNLDVSAIEEQAKCLLRKAAHEKVWVAVSYPGKKVPEWFGNNRTQDDSDTVNLSLSSHTLQGFIFCTVLPDYLEPEKVLSRPSIICYLGWEKRKVISGHLAFQKVRAGHVILCSLPDLAKSILDEIEENKENHEAATYNPNFLFRFRFGYYAPNLTQKKYYAPTILTFPAKEGGAYPIYASQDSELNPNSRKRKAIMI 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00394 1290 Pfam TIR domain 115 285 IPR000157 GO:0007165
Accr6g00394 1290 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 776 913 IPR044974 GO:0006952
Accr6g00394 1290 Gene3D - 447 532 IPR042197 -
Accr6g00394 1290 PRINTS Disease resistance protein signature 865 881 - -
Accr6g00394 1290 PRINTS Disease resistance protein signature 312 327 - -
Accr6g00394 1290 PRINTS Disease resistance protein signature 389 403 - -
Accr6g00394 1290 PRINTS Disease resistance protein signature 482 496 - -
Accr6g00394 1290 Gene3D Ribonuclease Inhibitor 618 912 IPR032675 -
Accr6g00394 1290 SMART LRR_CC_2 1008 1035 IPR006553 -
Accr6g00394 1290 SMART LRR_CC_2 843 870 IPR006553 -
Accr6g00394 1290 SMART LRR_CC_2 958 983 IPR006553 -
Accr6g00394 1290 SMART LRR_CC_2 751 778 IPR006553 -
Accr6g00394 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 287 542 IPR027417 -
Accr6g00394 1290 SUPERFAMILY L domain-like 774 1073 - -
Accr6g00394 1290 ProSiteProfiles TIR domain profile. 114 280 IPR000157 GO:0007165
Accr6g00394 1290 Gene3D - 111 282 IPR035897 -
Accr6g00394 1290 FunFam Disease resistance protein (TIR-NBS-LRR class) 112 282 - -
Accr6g00394 1290 Gene3D - 283 440 IPR027417 -
Accr6g00394 1290 Gene3D Ribonuclease Inhibitor 913 1099 IPR032675 -
Accr6g00394 1290 SUPERFAMILY L domain-like 586 795 - -
Accr6g00394 1290 SMART till_3 115 254 IPR000157 GO:0007165
Accr6g00394 1290 Pfam NB-ARC domain 305 511 IPR002182 GO:0043531
Accr6g00394 1290 SUPERFAMILY Toll/Interleukin receptor TIR domain 105 256 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00394 Accr-Chr6 6708584 6738883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00394 111 949 WRKY Transcription Factor Family AT4G12020 30.197 2.36e-83 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00394 - - pcin:129288608 830.861