Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00393 ATGGGAGTTGTAGCTTCTTCTTCGTCTTCCAAGAAACATGAAGTGTTTCTTAGTTTCAGGGGAGTGGATACTCGCAAATCCTTTACCAGTCATCTCCATACAGCCTTATGCCTCAAAGGTATTGAGACTTTTATTGATTATGAGCTCCCAAAAGGGGATGACATCTCCCCATCGCTCATCCAAGCAATTCAAGATTCATCTCTGTCTGCGATCGTCTTCTCTGAAAACTATGCCTCCTCCAAATGGTGTTTGAATGAGCTCATTGAGATCCTTCGCTGTAAAGAAGAGCAAGGACAGCTTGTTGTTCCTATATTCTACCAAGTGGACCCATCTCATGTACGCCATCAGAGGGGAGCTTATGCGAAAGCATTTGCACAACATTTGAAGGAAAACCCAGACAATGTGGATGAGTGGAGAAAAGCCCTTTTTGAAACTGCAAGTTTAGCAGGATGGGACTCTTGCAATTACAGGGATGAAGCAGTATTGATTCAAAATATTGTCAGTGACATCATAAAAAAACTAAACTATGGTTCTTCAAGTGCATTGGCAAATATTATTGGAATTGACCAGAATTGTGATGATATTGAATTTTTACTAGAAGGATTCTCAACCATTGGAATTTGGGGCATGGGTGGGATAGGCAAAACAACCATGGCTAAGGTTGTGTTTGCCAAATCCCGCTCTCAATTTGACTGTAGCTACTTCTTGGAAAATGTTAGAGAAGAGGAAGAAAAGCATGGTTTAAAATGTATACATGATAAACTTCTCAAGGAACTATCAAACGATGGATCTCTTGAAGGGCTCAGTCGTAGAAAAATTTTGATCGTACTTGATGATGTCAGTGACACAAGGCAGCTAGATTATTTGGAAAATGGAGCTCCTCCTTTTAGATATGGTAGTAAAGTCATCATAACAAGTAGAGATAGGCATGTACTTGAAGGAAGAGTTGAAAGAATACATAAAGCTAAAGCATTGGGCCATGACAATTCTCTTGAGCTTTTCAACCTCAAAGCCTTCCGCAAAGACGGTTATAAAAGTGAATATAAAGAACTAGTTAAAAGAGCACTTACTTATGCCCAAGGTGTTCCTTTGGCCGTAACTGTGTTGGGTTCATATCTTCATTCCTTAAGTATAGAAGAATGGAAAAGTGCGTTGAGCAGATTAGAAAAGACAACCCTTCCAAATATTCAAGATGTGCTAAAATTAAGCTATGATGGACTTCTTCATGAAGAGAAAGACGCATTTTTGGACATTGCTTGTTTTTTTAAAGGTAAATCTAAAGAATATGTGCTGGAAATGCTAGAGAGCTGTGGCTTTTATCCTCACATTATTTTGAAAAACCTTATGGATAAGGCGCTGATAACTATTGATGATTTTCGGGTATGGATGCATGATTTAATTCAATCAATGGCTTTTGAAATTGTTTGTCAAGAGTGTCCAACAAATCCTGGAAGACGTAGTCGACTATGGAAGCCTGATGAGATCTATGATGTACTAAAACATAATCAGGGAAGTGATGCAATTCAAGGTATAAGTTTAGATTTGTCTCAAATTAGAGATTTACAGTTGAGCACTGATACCTTCAAAAAGATGACTAATTTAAGGTTTCTGAAATTCTATTCATCTTGGGGTCAAAGATCATGCACTGCCAAAAACATGACTATTTTAAGGTTTCTGAAATTCTATTCATTTTGGGGTCAAAGATCGTGCACTGTGAATCTTCCTTCTGGTGGGCTTGACTCATTTTCCAAGTCAATATGTTTTCTTCAATGGGACAATTTTCCCTCAAAATCTCTACCGTTGTCATTTTGTGCTGAGAAGCTAGTCGAACTTCACATGCCTGATAGCCACCTTAAAACACTATGGGATGGCCTGCAGAACTTGGTGCATTTAAGAAAAATAATTCTTGATGGATCCAAATATTTGAGGAAGTTGCCTGATATTTCAACAGCTCAAAATCTTGAATGGCTTGATCTTGACAAATGTGAAAGTTTAAGCCACATTGATCCATCGGTTTTATCTCTTCCAAGATTGCATAAAGTGTCTCTAACTGAGTGCAAAAGCCTAAAGAGTTTGAAAATTGAGCGTCAGTCAAAATCTCTCGCAACATTAAAAGTCTACGGTTGCTCTGGGCTCAAAGAATTTTCATTCTCTTCAAACAAAATATATGATATATACTTAGGGTGTATACCTGTTAAGATATTGAACTTTCCAATTGGGCATATGGAGAAGCTTAAGGAGTTCAGTCTTGACTGCTCAAAACTAAAGAATCTTCCAATTGATGACATGATTAGTTGCATGAGATCTCTTGAGAGGCTCCGTCTTTATGATTGCGGTGGAATAATTGACAAATCAAAACTCCATTCCTTATTTGATTCTTTGTTTTCTCTAGAATCAATTTCTTTGAGTGGGGCATGCAAACTAACTGAACTTCCACACAATATCAAACATCTCTCAAGGCTAGAATCTCTTGACGTAAGCAATTGTAAGACCCTTCAATCTTTACCAGAGCTTCCTCCATCCATTAAAGTACTAGATGCCTCCGACTGCACATCATTAAAGACACTACAACTCACTTCTCATATTGAATCTTCAATGTTGGCAGATGAAATAATGTCGGGTTCAACGCTCTATTCCTCAGTTTGTTATCTCAGAAATCTTATGATCCTTGCTCTTCATGGATGCAAACAATTGTGTGAACTCCCTGAATCCATCGGCTCCTTATTCTCATTATATTCATTGGATTTGGAAGGAAGTAATATAGAGAGCCTGCCTGCTAGCATCAAGCATCTTTTAAATCTAAAGTACATTAACTTGCGCAATTGTAGAAGACTTCGTTCTCTGCCTGAACTGCCATTCTTCATCAAACATCTTGATGCTAATGGTTGCATATCACTAAAGATGGTACCCACTTTAGCAACCGCCCCACATTTGAGGTTCCTACTTCTAAAAGATTGTCGGAAATTAGAGAATCGCTATATGGAAAGTGCCTGTTTCCCATTAAAGGTAGCAATCTACAGAAGTGAATATTGTGAGTTTTATTACCCAGGAAGAAAAGTTCCAGAGTGGTTTAAATCTAATCAGGGAATAGATGCTTCCAACAATATATCTATTGAGCTGCCTTCACCCACAACCGACCTAATTGGCTTCGTTCTTTGTTCTGTTCTTTCTCACCACGCTCATGGTGATCACTTGAAATGCCAACTTTATTACGATGGAAAGAAGCACACATGCTCAGAATTTGAAGTAAAGAAAAATTTTCATTCACATCATGTTTTTCTATGGCGTGCTTCTGACAAGTTCATAAACTTAGGTAAAACAATGGATGGCCAAAACACCAATAATAGGCCAAACGTGTCATTTGAATTCTCTATTGTTACCAATAGTGGGAAGTTTGTTGATGGCGTGATTGAAGCATGTGGAGTTTGCCCAATATATGCCTCAGAGTATCACAAATTCATTCAACAAATGGAATTAGAGCCAAACTTGGGTGCCCAAAAAGAGACTTGTCTAGATGTTGTTGAGAATTGA 3531 0.3806 MGVVASSSSSKKHEVFLSFRGVDTRKSFTSHLHTALCLKGIETFIDYELPKGDDISPSLIQAIQDSSLSAIVFSENYASSKWCLNELIEILRCKEEQGQLVVPIFYQVDPSHVRHQRGAYAKAFAQHLKENPDNVDEWRKALFETASLAGWDSCNYRDEAVLIQNIVSDIIKKLNYGSSSALANIIGIDQNCDDIEFLLEGFSTIGIWGMGGIGKTTMAKVVFAKSRSQFDCSYFLENVREEEEKHGLKCIHDKLLKELSNDGSLEGLSRRKILIVLDDVSDTRQLDYLENGAPPFRYGSKVIITSRDRHVLEGRVERIHKAKALGHDNSLELFNLKAFRKDGYKSEYKELVKRALTYAQGVPLAVTVLGSYLHSLSIEEWKSALSRLEKTTLPNIQDVLKLSYDGLLHEEKDAFLDIACFFKGKSKEYVLEMLESCGFYPHIILKNLMDKALITIDDFRVWMHDLIQSMAFEIVCQECPTNPGRRSRLWKPDEIYDVLKHNQGSDAIQGISLDLSQIRDLQLSTDTFKKMTNLRFLKFYSSWGQRSCTAKNMTILRFLKFYSFWGQRSCTVNLPSGGLDSFSKSICFLQWDNFPSKSLPLSFCAEKLVELHMPDSHLKTLWDGLQNLVHLRKIILDGSKYLRKLPDISTAQNLEWLDLDKCESLSHIDPSVLSLPRLHKVSLTECKSLKSLKIERQSKSLATLKVYGCSGLKEFSFSSNKIYDIYLGCIPVKILNFPIGHMEKLKEFSLDCSKLKNLPIDDMISCMRSLERLRLYDCGGIIDKSKLHSLFDSLFSLESISLSGACKLTELPHNIKHLSRLESLDVSNCKTLQSLPELPPSIKVLDASDCTSLKTLQLTSHIESSMLADEIMSGSTLYSSVCYLRNLMILALHGCKQLCELPESIGSLFSLYSLDLEGSNIESLPASIKHLLNLKYINLRNCRRLRSLPELPFFIKHLDANGCISLKMVPTLATAPHLRFLLLKDCRKLENRYMESACFPLKVAIYRSEYCEFYYPGRKVPEWFKSNQGIDASNNISIELPSPTTDLIGFVLCSVLSHHAHGDHLKCQLYYDGKKHTCSEFEVKKNFHSHHVFLWRASDKFINLGKTMDGQNTNNRPNVSFEFSIVTNSGKFVDGVIEACGVCPIYASEYHKFIQQMELEPNLGAQKETCLDVVEN 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00393 1176 Pfam Leucine Rich Repeat 607 624 IPR011713 -
Accr6g00393 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 418 IPR027417 -
Accr6g00393 1176 SUPERFAMILY L domain-like 462 857 - -
Accr6g00393 1176 SUPERFAMILY L domain-like 785 1069 - -
Accr6g00393 1176 ProSiteProfiles TIR domain profile. 11 174 IPR000157 GO:0007165
Accr6g00393 1176 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 151 IPR035897 -
Accr6g00393 1176 Pfam NB-ARC domain 204 398 IPR002182 GO:0043531
Accr6g00393 1176 Pfam TIR domain 12 179 IPR000157 GO:0007165
Accr6g00393 1176 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 176 - -
Accr6g00393 1176 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 716 IPR044974 GO:0006952
Accr6g00393 1176 PRINTS Disease resistance protein signature 204 219 - -
Accr6g00393 1176 PRINTS Disease resistance protein signature 267 281 - -
Accr6g00393 1176 PRINTS Disease resistance protein signature 816 832 - -
Accr6g00393 1176 PRINTS Disease resistance protein signature 359 373 - -
Accr6g00393 1176 Gene3D Ribonuclease Inhibitor 721 873 IPR032675 -
Accr6g00393 1176 Gene3D Ribonuclease Inhibitor 498 720 IPR032675 -
Accr6g00393 1176 SMART till_3 12 148 IPR000157 GO:0007165
Accr6g00393 1176 Gene3D - 173 320 IPR027417 -
Accr6g00393 1176 Gene3D - 324 407 IPR042197 -
Accr6g00393 1176 Gene3D Ribonuclease Inhibitor 874 1059 IPR032675 -
Accr6g00393 1176 Pfam C-JID domain 1015 1149 IPR045344 -
Accr6g00393 1176 Gene3D - 9 172 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00393 Accr-Chr6 6646628 6652773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00393 742 944 WRKY Transcription Factor Family AT4G12020 29.665 3.67e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00393 - - pcin:129289344 1061.21