Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00389 ATGGCTGCTGCTGCTTCGTCGTCGTCATCATCATCCTCCTCCTCCTCTTCACTTCCTCCCAAGAAACATGATGTGTTTCTTAGTTTCAGAGGTGAAGATACTCGTAGAACATTCACCAGCCATCTCTTCACAGCCTTGTGCCAAAGAGGAATTCGAACCTACATAGATAATGAGCTCCGGAAAGGGGATGACATCTCAGACGCACTCATCCAGGCAATTAAGGATTCAAGTATTGCTGTGGTGATCTTCTCTGAGAACTATGCCTCCTCAAAATGGTGTTTGAATGAACTCATCCAGATCCTTTGGTGTAAAGAGGTCCAAGGACAGCTTGTTATTCCCGTCTTCTATCAAATTGACCCATCTCATGTACGCAACCAGAGGCAAACTTACAGGGAGGCATTTTCAAAACATGAGAGCGACTTCAGGCTTACTCTTGACAGGGTGAACGAGTGGAAACAAGCTCTTTTTATAACTGCAAATTTGGCTGGCTGGGACTCTCGAACCTGTAGGGATGAATCAGAACTCATTCAAAACATTGTCAGTGACGTTCAACAAAACATTAACCTCAGGTATCCAAGTTCATTGATGGGTCTTGTTGGAATTGATGAAAATTGTGACAAGATTGAAATGTTATTGAATAATGTCCCAATAATTGGAATTTGGGGCATGGGTGGTATAGGCAAGACAACCATGGCTAAAACTTTGTTTGCCAAACTCTCCTACAAATTTGAGAGTTCTTGCTTTTTGGAAAATATAAGAGAAGAGGAAGAAAAACGAGGATTGACATATTTACGGAACAATCTCTTGTTTGAGCTACTAAAGGAAGAAACTTCCCCTCATAGGCTATCTAATGTTGCAAATAACACCTTTGTTACGAGAAGACTAAGCTGTAAAAAAGTCTTCATAGTGCTTGATGATGTTAGTAGTTGGAAGCAATTAGAGTATTTGGCCCCATATTGTGAATACTTGGGACTAGGCAGTAAAGTCATAATTACAACAAGGCATAAGCAATTGCTTGTAATTGCTAGAGTTAATGAAATATATAAGGCCAAGCCTTTGAGCCATCACAGATCTGTTGAGCTCTTCAACCTCAGAGCTTTCCACTCATATCGGCCAAAAACTGGTTATGAATCCCTCTCACAAAGGATTGTTCATTATGCACTTGGCATCCCGTTAGTTTTGGCAGTATTGGGGTCATCTCTTCGTTCAAAAACTCCAAAGGAATGGGATAGTGCATTGTCAAAACTAAAGAAGAGTCCAAACCAAGATGTTCTAAAAGTTTTGAAATTGAGCTTTGATGGATTAGATCATGAAGAGAAGGAAATGTTTCTAGATATTGCATTTTTTTTGAAGGGTGAAAAGAAAGAAGATGTGATAACACTATTAGAAAGTTTTGGTTTCGATGCAAGAATTGGGTTAGAAACCCTTGTAGATAAAACTCTTGTAACTATTGATGGCAGCCGAGTAGGGATGCATGATTTAATAAAAGAAATGGGCCATGACATTGTTCGTCAACAATGTATTAAAGAACCTGGAAGACGAAGTAGATTATGTGATCCAAAAGACATCCATCATGTGTTGAAGAATAATACAGGAACTGATGCAATTGAAGGCATAGTATTAGATCTGTCCAAAATTAGACGTATACACTTGAGCATTGATACCTTCAAAAAGATGCCTAATCTAAGATTTATAAAATTCTATTCGCTCGAGAATAGGAGTTGTAAGGTGGACTTGTCTTCTGGCCTTGAATCATTATCTGGGCAATTAAGGTACCTTCAATGGGATGGTTATCCTTTGGAGTCTCTACCTTCCACATTTTGTCCAGAGAAACTTGTGGAACTTTGCATGCGAGACAGCCGAGTTAAAAAACTTTGGGATGGAGTGAAGGATTTTGTGAACTTAAGGAGGATAAACCTTGCTGGATGCAAACAATTGATAGAGCTACCTGATTTTTCGAAGGCACAGAATCTTAATTCGGTGGATCTTGAATCATGTGAAAGTTTGTGTGATGTTCATCCATCTATCTTATCTCAAAGGCTTGTTTCCTTGAATCTCAATGAATGCATTAAACTAAAGAAACTCCGTAGTGAGATTCCTCTAAAGTCACTGGCAGATATCCGCCTCAATTGGTGCTTTAGTTTGACAGAATTTTCATTGTCATTAAAAGAAATCACAAGGTTAGAATTAGGAACTTCTCGCATTGAAATATTGGACTCACCAATTAGGCATTTCAGTAAACTTAAACAGTTCAGTCTTAATGGTTCAAGACTGAAGAGTTTTCCTATAAATGAGTTATGCGGTCTAAGATCTCTAGAAGAGCTACGGCTTTCTTATTGTGAACAAGTAATTGACAAACTGCAGGTGCATATTCTGTTTGATGCCTTGCGGTTTTTACAAAAGCTACATTTGGATGGGTGTCGGAACTTAACTGAACTTCCTAACAATATCAAGCATCTTTCAGGGCTAAAAGTTCTTTCTTTGAAGAATTGTGATCGACTACAATCTATTCCAGAGCTTCCACCATCCATAGAAGAATTAGATGCCACCAATTGCTCATCATTAGAAACAATAACTCTCAATAATGAGAAGGAATATTCATTGTCGCCAGAAGAAGGAATGATGACTTTAGCACCCTATTCCTCAATTGGGTATCTTGTGGAACTTAGAAAGCTTCGCCTTAATGTCTCAAGTCTGATGAATTTTTCCATTGAGCAGTTATGTCCTTTGAAATCTCTTAAGGAGCTCACTCTTCTTGATTGTGGACCACTGGTTTTTAAGTCAAAGTTGCACAAGTTATTTGATGCCTTACGCTTTTTGGTAGACCTTTATTTGGAAGGATGTTGTAACTTGTGTGAAATTCCTGACAACATTAGCTCCTTATCATCATTATATTTATTGGGATTGGTAGGAAGCAATGTAGAGTACTTGCCTTCTGGCATCAAGCATCTTTTGAAGCTAGACTACATTTACTTGACCAATTGTAGGAGGCTTCGATCTCTACCAAAACTTCCACCGTTCACTAGATACGTAAAGGCCACTAATTGCTCATCACTGGAGGTTGCCTTCCCTTTAACAACTTCTAGGCCACGATGGAAATATCTGGTGGAGTCCCTCTTTCTTGAAAATTGCTTGAAGTTGGAGGAGCATTCACTTTCCTGCATTGAGGAATATGCTTGTTTATCGTTGAAGCGAGCAGCATATCTCAATCGAATTGGTGATTTTTGTTACCCAGGAAGAAAAATTCCAGAGTGGCTTAGATATAACCAGGCAACTAAGGCTTCAAGTTCCATTACCATTGAACTCTCTTCAGTCGTCAACAACTTGTTGGGCTTTGTTTTCTGCTCTGTTCTTCCTCAATTCACGTCAAAGCCAAACTGTCAGATTTACCTAAAATGCCAAATATATTTTGAAGATGGCGTAGAAGCCAAAGACATGGGTTACTTTAAAAGGATAGCAGAATTAAATTCGCATCATGTTTTTCTATGGTATGATCCAATCTACTCTGTATGCATTTTGAGGGAACTTATGGAAAGAGAGGATGATCAAGGCATTAAAGGTGACCCTAAACTTTCATTTGAGTTTTCCATTGTCTCTTTTGATGAGAACTACCACGCAGCCAAACATGATCTAATAGAAGCATGTGAAGTTTGCCCAATATATGCTTCAGAATATCACAATTTCCTTCAACAAATGGAATTCGGGTTGGATTTGGGTAGCCAAAAAAAGAGTGGTTTTGATAATAACGAGCATTCACTTTGTGGAATTATGGAATATGCTAGTTTCTCATTGAAGCAAGTGTATGACAATTTTGAAACGTGGATTTATTCCCCTGAAATGCGGAACAACCCTGTGGGGTTTCTAGACAAAACCACGCAGACTCGTTCAATGTCCTTTCAACTTCCATTTTTTGATGACTTATTGGGCTTCATTTTTTGTTTTGTTATTCCTCAATTCTCCTCGAAGGAAAAGGATCGAAGTCACTCAAGCTGCCAGTGCCTCTTACATGATTTTGATGATGTAAAAATGGAACCTCTAAAGCATTATTTTGAAGGCCCAAGAGGATGGCATTATTCGATGACAAAATTGAATTCGGATAATGTCTTCCAATGGTATGATCCCCTCTTTTGTGAATTCATATTAGATCAAGTTAGAAGAAAAAGAGTTAGCGAAGGGGGAGTGCTTTCATTTGAATTTGAGTTTGGTGGTTCCTTGATCGAAGAATGGGGAATCCACCCAATATATGCCTCAAAATACAAAAATTTCCTTCAACAAAAGGAATTGAAGTTGGAGCGAGGCATAAAGAGACCTCGAGATACTTGTGATGAGGAAGAACTACGTACTCCAACAAAGAAATTGAAGGAGTCTTCTCTTCGACCTACCCACATTGATGAGTTACTACTCTCACTATCTGAAATGAATTTGGAATTTGTGAAGGATAGCAGCACCCTACAAAAATAA 4461 0.3865 MAAAASSSSSSSSSSSSLPPKKHDVFLSFRGEDTRRTFTSHLFTALCQRGIRTYIDNELRKGDDISDALIQAIKDSSIAVVIFSENYASSKWCLNELIQILWCKEVQGQLVIPVFYQIDPSHVRNQRQTYREAFSKHESDFRLTLDRVNEWKQALFITANLAGWDSRTCRDESELIQNIVSDVQQNINLRYPSSLMGLVGIDENCDKIEMLLNNVPIIGIWGMGGIGKTTMAKTLFAKLSYKFESSCFLENIREEEEKRGLTYLRNNLLFELLKEETSPHRLSNVANNTFVTRRLSCKKVFIVLDDVSSWKQLEYLAPYCEYLGLGSKVIITTRHKQLLVIARVNEIYKAKPLSHHRSVELFNLRAFHSYRPKTGYESLSQRIVHYALGIPLVLAVLGSSLRSKTPKEWDSALSKLKKSPNQDVLKVLKLSFDGLDHEEKEMFLDIAFFLKGEKKEDVITLLESFGFDARIGLETLVDKTLVTIDGSRVGMHDLIKEMGHDIVRQQCIKEPGRRSRLCDPKDIHHVLKNNTGTDAIEGIVLDLSKIRRIHLSIDTFKKMPNLRFIKFYSLENRSCKVDLSSGLESLSGQLRYLQWDGYPLESLPSTFCPEKLVELCMRDSRVKKLWDGVKDFVNLRRINLAGCKQLIELPDFSKAQNLNSVDLESCESLCDVHPSILSQRLVSLNLNECIKLKKLRSEIPLKSLADIRLNWCFSLTEFSLSLKEITRLELGTSRIEILDSPIRHFSKLKQFSLNGSRLKSFPINELCGLRSLEELRLSYCEQVIDKLQVHILFDALRFLQKLHLDGCRNLTELPNNIKHLSGLKVLSLKNCDRLQSIPELPPSIEELDATNCSSLETITLNNEKEYSLSPEEGMMTLAPYSSIGYLVELRKLRLNVSSLMNFSIEQLCPLKSLKELTLLDCGPLVFKSKLHKLFDALRFLVDLYLEGCCNLCEIPDNISSLSSLYLLGLVGSNVEYLPSGIKHLLKLDYIYLTNCRRLRSLPKLPPFTRYVKATNCSSLEVAFPLTTSRPRWKYLVESLFLENCLKLEEHSLSCIEEYACLSLKRAAYLNRIGDFCYPGRKIPEWLRYNQATKASSSITIELSSVVNNLLGFVFCSVLPQFTSKPNCQIYLKCQIYFEDGVEAKDMGYFKRIAELNSHHVFLWYDPIYSVCILRELMEREDDQGIKGDPKLSFEFSIVSFDENYHAAKHDLIEACEVCPIYASEYHNFLQQMEFGLDLGSQKKSGFDNNEHSLCGIMEYASFSLKQVYDNFETWIYSPEMRNNPVGFLDKTTQTRSMSFQLPFFDDLLGFIFCFVIPQFSSKEKDRSHSSCQCLLHDFDDVKMEPLKHYFEGPRGWHYSMTKLNSDNVFQWYDPLFCEFILDQVRRKRVSEGGVLSFEFEFGGSLIEEWGIHPIYASKYKNFLQQKELKLERGIKRPRDTCDEEELRTPTKKLKESSLRPTHIDELLLSLSEMNLEFVKDSSTLQK 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00389 1486 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 164 IPR035897 -
Accr6g00389 1486 Pfam NB-ARC domain 213 422 IPR002182 GO:0043531
Accr6g00389 1486 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 718 IPR044974 GO:0006952
Accr6g00389 1486 Gene3D - 20 184 IPR035897 -
Accr6g00389 1486 SMART till_3 22 161 IPR000157 GO:0007165
Accr6g00389 1486 PRINTS Disease resistance protein signature 387 401 - -
Accr6g00389 1486 PRINTS Disease resistance protein signature 217 232 - -
Accr6g00389 1486 PRINTS Disease resistance protein signature 818 834 - -
Accr6g00389 1486 PRINTS Disease resistance protein signature 294 308 - -
Accr6g00389 1486 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Accr6g00389 1486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 446 IPR027417 -
Accr6g00389 1486 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Accr6g00389 1486 SUPERFAMILY L domain-like 793 1013 - -
Accr6g00389 1486 Gene3D Ribonuclease Inhibitor 866 1109 IPR032675 -
Accr6g00389 1486 Gene3D - 185 346 IPR027417 -
Accr6g00389 1486 MobiDBLite consensus disorder prediction 1 21 - -
Accr6g00389 1486 Gene3D - 353 436 IPR042197 -
Accr6g00389 1486 SUPERFAMILY "Winged helix" DNA-binding domain 423 528 IPR036390 -
Accr6g00389 1486 SUPERFAMILY L domain-like 540 864 - -
Accr6g00389 1486 Gene3D Ribonuclease Inhibitor 527 698 IPR032675 -
Accr6g00389 1486 Gene3D Ribonuclease Inhibitor 699 865 IPR032675 -
Accr6g00389 1486 Pfam TIR domain 22 191 IPR000157 GO:0007165
Accr6g00389 1486 Pfam C-JID domain 1077 1224 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00389 Accr-Chr6 6461576 6467005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00389 769 997 WRKY Transcription Factor Family AT4G12020 30.638 4.74e-08 56.2