Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00388 ATGGGACTAAGTAGATTAAGAGCAAAGATTAAAAGGAGCCATCTGTACACATTTGCTTGTCTTAGGCGGACTCACACTGCACCTCAGAATGCTCTAAACCTTCAAGGTCCTGGTTTTTCAAGAGTTGTACATTGCAACCACTCTCAACCCCCTGAAAAGAAGTCTCAGTTTTACTGCCGGAATGACATATCAACTACAAAATACAATGTTGTAACATTTTTACCTAAGGCACTCTATGAGCAATTTCGACGGGGCGCTAATATATACTTCCTTGTGGCGGCATGCCTCTCAGCCTCTCCAATCTCACCATTCTCTCCAATCAGCATGATTGCTCCTTTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCATTAGAAGATTGGCGCAGGTTTCGTCAGGATGTCAAAGTTAATCACAGGAAAGCTAGTGTTCATGAAGGCAATGGTGTTTTTGCTCTCAAGCCATGGCAGGACATTGTAGTTGGGGATGTAGTAAAAGTAGACAAGGATCAATTTTTTCCTGCTGATTTGCTTTTTTTGTCATCAAGTTATGAGGATGGGATATGCTATGTGGAAACTATGAATTTAGATGGTGAGACAAACCTAAAGGTGAAAAGATCTTTGGAGGTTACCATGCTTCTATATAATGATGAATCTTTCAAAGATTTCTTAGGAATAATTCGTTGTGAAGACCCAAATCCTAGTCTCTACACATTTGTTGGAAATTTTGAGTATGAACGTGAGGTTCATCCAATTGAGCCCAGTCAAATTCTCCTCCGAGATTCAAAGCTCAGGAACACTGATTTCATATATGGAGTGGTCATTTTCACTGGTCATGAAAGCAAAGTGATGCAGAATTCTACAAAATCTCCGTCAAAAAGGAGCAAAATAGAAAGAAAGATGGATTATATCATATACCTTCTATTCACTGTTCTTATTTTGATATCCTTGGTCAGTTCAGCAATATTCTCTGTAATCACTAGATTCCAAACAATAAATTGGTGGTATCTAAAGCCCATGCAATCAGATGTCCTGTATGATCCCAATAATGCTGCATTGGCTGGGTTGAGTCATCTGGTTACTGCACTAATTCTTTATGGATATTTGATACCTATATCACTTTATGTTTCAATTGAGGTCGTGAAGGTTTTGCAAGCAAACTTGGTTGAACAAGACTTGCACATGTATCACCAAGAAACTGGCACTCCAGCTCGTGCCCGAACATCAAATTTGAATGAAGAGTTGGGTCAAGTGGACACTATACTTTCTGATAAGACTGGAACTTTGACTTGCAATCAGATGGATTTTTTAAAGTGCTCCATTGCTGGTGTTGCATATGGTGTGAGTTCCAGTGAAGTTGAGCTTGCTACGGCACAGCAGATGGCTCTTGAACTTGAGGAGGACCAGCAGGAGGGTCTCTCCAATTCACCCACACATAAGGTGAAGGCATCTATTTCATGGGAAAATGTTGACCTGGAGACTGTTGTTACTTCCAAGGATGATGAGGCTCAGAAGGCTACTACAAAGGGTTTCAGATTTGAGGACGTTCGCCTCATGAACTGTAACTGGTTGAAGGAGTCCAATCCCAATGTCCTCTTATTGTATTTTCGAATATTAGCTGTTTGCCATACTGCCATTCCTGAGCTGAATGAGGAGACAGGAGCTTTAACTTATGAGGCTGAATCCCCTGATGAAGGGGCTTTCTTAGCAGCATCAAGAGAATTTGGTTTTGAGTTTTGCAAAAGAACTCAAGCAAGTGTTTTCATCCGTGAAAATCTTTCACCTTCAGAACAAGCTGTTGAAAGGGAGTACAAAATCCTGAATCTATTGGACTTTACTAGCAAAAGAAAGCGAATGACAGTGATTGTGCGTGATGAGGAGGGAAGTTTACTTCTTATGTGCAAAGGTGCTGACAGTATCATATTTGATCGACTGTCAAAGAATGGAAAGACATATTTAGATGCTACAACCAAACATTTGAACGAATATGGAGAAAATGGTTTGAGAACATTGGCTCTAGCCTACAGAAAGCTTGATGAGGAAGAGTACAAAGCTTGGAACAATGAATTTCAGAAAGCTAAAACTGCTGTTGGGCCTGACAGAGAGGAAGTGCTTGAGGAATTAGCTGAAAAAATGGAAAAAGAGCTGATTCTTGTCGGGGCTACTGCTGTGGAAGACAAACTGCAAAATGGGGTTCCCCAATGCATTGATAAACTTGCACAAGCAGGTCTCAAGATCTGGGTTTTGACAGGGGATAAGATGGAAACTGCAATCAACATCGGTTTTTCTTGTAGTTTGCTTCGACATGGCATGAAGCAGATCTGCATATCTATTCCAGAGTCAGACTCAGTTACCAGTTTGGACAAAAAGGCCATTAAGGAGGGCATTTTGAATCAAATCATCAATGCCTCACAAATGGTAAAGCTGGAGACAGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAGGCTCTGGCTTATACTTTAGAAGAAGATATGAAGCATCAATTTTTGGGGTTGGCTGTTGATTGTGCATCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTAACAAGGTTAGTTAAAGAAGGCACTGGGAAGACCACTTTAGGAATTGGTGATGGTGCAAATGACGTTGGCATGATACAAGAAGCAGATATTGGCGTTGGTATTAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTGCAATCGCTCAATTTAGATTTTTGGAACGACTTTTGGTAATCCATGGACACTGGTGCTACAAGAGAATAGCTGAAATGATATGCTATTTCTTCTACAAAAACATAGCTTTTGGTCTCACCATCTTCTATTTTGAGGCCTTGACGAGCTTCTCTGGGCAATCAGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTACCTGTCATTTCACTTGGAGTATTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTATATCAGCAAGGCCCAAGAAATTTGTTCTTTGACTGGTTTAGAATACTGGGATGGATGCTCAATGGTCTATTTTGTTCCCTCGTTGTCTTCATATTCAACATCTGCATTTTTTATGACCAAGCCTTCCGAGCTGATGGCAGGACCCCGGACATGGCTGTTGTCGGTACCACAATGTTCACTTGCATCATTTGGGCTGTCAACTGCCAGATTGCCCTCATCATTTGCCATTTCACATGGATGCAGTACATATTTATCATAGGAAGTATAGCCTGTTGGTACGTTGTCTTAGTGCTATATGGCATGCTTTCGCCGACCTATTCGAAAACTGCCTACCAAATCCTGCTTGAAGTTCTTGCTCCTGCACCAATGTATTGGTTGGCCACTTTTCTAGTAACAGTTACTTGTAATTTTCCTTACTATGCCCATATATGCTTTCAAAGATGGAAAAATCCCTTGGATCATCACATCATCAGAGAGATCAAGCACTTCAACATGGACGAAGTGGACCAACGCATGTGGAAGAGGGAAAGGTCTAAAGCAAGACAGAAAACCAGCATTGGATTCAGTGCAAGAGTGGAAGCTAAGATGAGAAATTTGAAGCAGAAGCTTCAGAAGAAGCAATCAACCTTGCCTTTCATGCCTTCTCCAGATGGAAATTGCAAATAA 3678 0.4105 MGLSRLRAKIKRSHLYTFACLRRTHTAPQNALNLQGPGFSRVVHCNHSQPPEKKSQFYCRNDISTTKYNVVTFLPKALYEQFRRGANIYFLVAACLSASPISPFSPISMIAPLAFVVGLSMAKEALEDWRRFRQDVKVNHRKASVHEGNGVFALKPWQDIVVGDVVKVDKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEVTMLLYNDESFKDFLGIIRCEDPNPSLYTFVGNFEYEREVHPIEPSQILLRDSKLRNTDFIYGVVIFTGHESKVMQNSTKSPSKRSKIERKMDYIIYLLFTVLILISLVSSAIFSVITRFQTINWWYLKPMQSDVLYDPNNAALAGLSHLVTALILYGYLIPISLYVSIEVVKVLQANLVEQDLHMYHQETGTPARARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGVAYGVSSSEVELATAQQMALELEEDQQEGLSNSPTHKVKASISWENVDLETVVTSKDDEAQKATTKGFRFEDVRLMNCNWLKESNPNVLLLYFRILAVCHTAIPELNEETGALTYEAESPDEGAFLAASREFGFEFCKRTQASVFIRENLSPSEQAVEREYKILNLLDFTSKRKRMTVIVRDEEGSLLLMCKGADSIIFDRLSKNGKTYLDATTKHLNEYGENGLRTLALAYRKLDEEEYKAWNNEFQKAKTAVGPDREEVLEELAEKMEKELILVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRHGMKQICISIPESDSVTSLDKKAIKEGILNQIINASQMVKLETDPHAAFALIIDGKALAYTLEEDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLGIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVIHGHWCYKRIAEMICYFFYKNIAFGLTIFYFEALTSFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNLFFDWFRILGWMLNGLFCSLVVFIFNICIFYDQAFRADGRTPDMAVVGTTMFTCIIWAVNCQIALIICHFTWMQYIFIIGSIACWYVVLVLYGMLSPTYSKTAYQILLEVLAPAPMYWLATFLVTVTCNFPYYAHICFQRWKNPLDHHIIREIKHFNMDEVDQRMWKRERSKARQKTSIGFSARVEAKMRNLKQKLQKKQSTLPFMPSPDGNCK 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00388 1225 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1178 - -
Accr6g00388 1225 FunFam Phospholipid-transporting ATPase 119 289 - -
Accr6g00388 1225 Pfam Phospholipid-translocating P-type ATPase C-terminal 905 1155 IPR032630 -
Accr6g00388 1225 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1153 IPR023298 -
Accr6g00388 1225 NCBIfam phospholipid-translocating P-type ATPase 58 1163 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Accr6g00388 1225 SUPERFAMILY HAD-like 411 921 IPR036412 -
Accr6g00388 1225 Gene3D - 716 917 IPR023214 -
Accr6g00388 1225 Pfam Cation transport ATPase (P-type) 542 647 - -
Accr6g00388 1225 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Accr6g00388 1225 PRINTS P-type cation-transporting ATPase superfamily signature 877 896 - -
Accr6g00388 1225 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Accr6g00388 1225 SFLD p-type atpase 407 928 IPR044492 -
Accr6g00388 1225 Coils Coil 449 469 - -
Accr6g00388 1225 SFLD C1.7: P-type atpase like 407 928 - -
Accr6g00388 1225 Coils Coil 1193 1213 - -
Accr6g00388 1225 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Accr6g00388 1225 FunFam Phospholipid-transporting ATPase 587 718 - -
Accr6g00388 1225 NCBIfam HAD-IC family P-type ATPase 849 958 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr6g00388 1225 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 519 682 IPR023299 GO:0000166
Accr6g00388 1225 CDD P-type_ATPase_APLT_Dnf-like 60 1036 - -
Accr6g00388 1225 Gene3D - 584 699 IPR023299 GO:0000166
Accr6g00388 1225 FunFam Phospholipid-transporting ATPase 720 917 - -
Accr6g00388 1225 Gene3D - 118 289 - -
Accr6g00388 1225 SUPERFAMILY Calcium ATPase, transduction domain A 146 287 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00388 Accr-Chr6 6427180 6432794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00388 1 1221 Primary Pumps ATPases AT1G17500 70.106 0.0 1806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00388 K01530 - gmx:100819559 1882.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00558 7 7853823 7859731 Accr6g00388 6 6427180 6432794 CCT