Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00379 ATGATTTTTGAAGCCCTGTCAACATTGGCAGGTTCCAATGGGTCTGACCTATATGCTATTATTAGCTTTATTGAGCAAAAGCATGAGGTTCCTCAAAATTACGGACAAGCAATAGGTGAAAGGTTGAGAAAGCTTGTGGATCAAGGAAAACTTGAAATGGTACGAAATTGTTTCAGGATAAAGACACCTGTGGAGGCAAAACCACCTTCACCAGAACAAACCGATTCCAGTCCATGCCAATCACTGCCCTCAGGCATTACGGCATCTCATGAGTCGATAGTGGATGCTAAGGAGATTGCAGCATTAGTTGCTGATTTAGAGCACAAATCACATTTGGCTGCTGAAGCAGTTAAGGAGGCAGAAAAAGTCTCCGAGTTGGCCGAAGAAGCTAATGCAATGTTACAGAAAATGGAAGAGATTAAAGAGCGATGTACTACTGATAAATTGATCCTATCTTCTCAATGA 465 0.4172 MIFEALSTLAGSNGSDLYAIISFIEQKHEVPQNYGQAIGERLRKLVDQGKLEMVRNCFRIKTPVEAKPPSPEQTDSSPCQSLPSGITASHESIVDAKEIAALVADLEHKSHLAAEAVKEAEKVSELAEEANAMLQKMEEIKERCTTDKLILSSQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00379 154 PANTHER SINGLE MYB HISTONE 4 1 149 IPR044597 GO:0003691
Accr6g00379 154 MobiDBLite consensus disorder prediction 69 85 - -
Accr6g00379 154 MobiDBLite consensus disorder prediction 62 85 - -
Accr6g00379 154 Gene3D - 1 73 IPR036388 -
Accr6g00379 154 Pfam linker histone H1 and H5 family 1 55 IPR005818 GO:0000786|GO:0003677|GO:0006334
Accr6g00379 154 Coils Coil 113 147 - -
Accr6g00379 154 SUPERFAMILY "Winged helix" DNA-binding domain 1 69 IPR036390 -
Accr6g00379 154 SMART h15plus2 1 57 IPR005818 GO:0000786|GO:0003677|GO:0006334
Accr6g00379 154 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 1 62 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00379 Accr-Chr6 6253656 6255182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00379 1 151 Single Myb Histone (SMH) Gene Family AT1G72740 37.662 9.90e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00379 K09422 - cave:132188703 147.902