Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00378 ATGATTTTTGAAGCCCTGTCAACATTGGCAGGTTCCAATGGGTCTGACCTATATGCTATTATTAGCTTTATTGAGCAAAAGCATGAGGTTCCTCAAAATTACGGACAAGCAATAGGTGAAAGGTTGAGAAAGCTTGTGGATCAAGGAAAACTTGAAATGGTACGAAATTGTTTCAGGATAAAGACACCTGTGGAGGCAAAACCACCTTCACCAGAACAAACCGATTCCAGTCCATGCCAATCACTGCCCTCAGGCATTACGGCATCTCATGAGTCGATAGTGGATGCTAAGGAGATTGCAGCATTAGTTGCTGATTTAGAGCACAAATCACATTTGGCTGCTGAAGCAGTTAAGGAGGCAGAAAAAGTCTCCGAGTTGGCCGAAGAAGCTAATGCAATGTTACAGAAAATGGAAGAGATTAAAGAGCGATGTTCACGGGGTGAAACCGTTTACTTGGATTAA 462 0.4264 MIFEALSTLAGSNGSDLYAIISFIEQKHEVPQNYGQAIGERLRKLVDQGKLEMVRNCFRIKTPVEAKPPSPEQTDSSPCQSLPSGITASHESIVDAKEIAALVADLEHKSHLAAEAVKEAEKVSELAEEANAMLQKMEEIKERCSRGETVYLD 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00378 153 PANTHER SINGLE MYB HISTONE 4 1 151 IPR044597 GO:0003691
Accr6g00378 153 MobiDBLite consensus disorder prediction 69 85 - -
Accr6g00378 153 Coils Coil 113 143 - -
Accr6g00378 153 Pfam linker histone H1 and H5 family 1 55 IPR005818 GO:0000786|GO:0003677|GO:0006334
Accr6g00378 153 Gene3D - 1 73 IPR036388 -
Accr6g00378 153 SUPERFAMILY "Winged helix" DNA-binding domain 1 69 IPR036390 -
Accr6g00378 153 MobiDBLite consensus disorder prediction 63 85 - -
Accr6g00378 153 SMART h15plus2 1 57 IPR005818 GO:0000786|GO:0003677|GO:0006334
Accr6g00378 153 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 1 62 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00378 Accr-Chr6 6253656 6255274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00378 1 152 Single Myb Histone (SMH) Gene Family AT1G72740 40.000 1.92e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00378 K09422 - cave:132188703 153.68