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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Accr6g00346
ATGGGAGCTCTTCCACAACAATGTTTGAATACTAGGCTGTTTAGTTTTCCATTTCAAGAACGTTACTCATCGTCAACCCAACCAAATGATCAATCTGATCCTAAAGGTGTTTCAGCTAACTCAGGTCCTTCAGATGGAAAGTGCTTCAGAGATCTCATCAGGTCGCATGTAGGGAGGCAGGATTTTGCCTTTCCTTCTTCACTTCTGGATCATAACAAATCAATGATTCATCATTCTCAACTAATGGGAATGGCTCCTCCACTTCGAGTTCCACTTCCCCTCGACCTCACAGAAGAACCCATATTTGTGAATGCAAAACAATATCATGCAATTCTGAGGCGAAGACAGTATCGATCAAAACTCGAATCACAGAACAAGCTCAACAAAACCCGAAAACCATATCTTCACAAATCTCGCCACCTACATGCACTGAAGAGAGCTAGAGGTTCCGGTGGACGCTTTCTTAACACCAAAAATCTCCAAGAATCATCATCATCAGAACTACCTCCAGCATTGAATAAGCTGACTGTTACTTCACCAGAATCTGAATTTATTGGGTTACAAAATTGCAGAGACGGTTCCGATGTGACGGGCGCTTCTAACAGCGACAAAATCTTCCAGCAACAACATGAATCGAATTCGAGGTTGTGTGGAAGATATCATCCTCACGTTCGAAGCAATATGCAAAGTTTCTCAGTTGATATGAGTGGCGGTGATGAGAATAAGCATAGTGTATCTGTCTTCATGTGGCAAGATTTGAAAAAGGGAAGTTAA
774
0.4199
MGALPQQCLNTRLFSFPFQERYSSSTQPNDQSDPKGVSANSGPSDGKCFRDLIRSHVGRQDFAFPSSLLDHNKSMIHHSQLMGMAPPLRVPLPLDLTEEPIFVNAKQYHAILRRRQYRSKLESQNKLNKTRKPYLHKSRHLHALKRARGSGGRFLNTKNLQESSSSELPPALNKLTVTSPESEFIGLQNCRDGSDVTGASNSDKIFQQQHESNSRLCGRYHPHVRSNMQSFSVDMSGGDENKHSVSVFMWQDLKKGS
257
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Accr6g00346
257
MobiDBLite
consensus disorder prediction
22
44
-
-
Accr6g00346
257
PANTHER
TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
44
215
IPR001289
GO:0003700|GO:0006355
Accr6g00346
257
MobiDBLite
consensus disorder prediction
22
39
-
-
Accr6g00346
257
SMART
cbf3
96
157
IPR001289
GO:0003700|GO:0006355
Accr6g00346
257
Pfam
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
99
154
IPR001289
GO:0003700|GO:0006355
Accr6g00346
257
Gene3D
-
97
158
-
-
Accr6g00346
257
ProSiteProfiles
NF-YA/HAP2 family profile.
97
157
IPR001289
GO:0003700|GO:0006355
Accr6g00346
257
PRINTS
CCAAT-binding transcription factor subunit B signature
131
154
IPR001289
GO:0003700|GO:0006355
Accr6g00346
257
PRINTS
CCAAT-binding transcription factor subunit B signature
100
122
IPR001289
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Accr6g00346
Accr-Chr6
5463153
5465544
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Accr6g00346
89
249
CCAAT-HAP2 Transcription Factor Family
AT1G17590
50.877
4.41e-40
139
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YA
Accr6g00346
CBFB_NFYA
1.4e-25
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Accr6g00346
K08064
-
gmx:100500765
228.024
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