Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00336 ATGGCTCTTGTTGCTGCTTCATCCTCTTCATCTGCTCAATCTCTCCCCAAGAAGTATGATGTATTCATCAGCTTTAGGGGTGAGGACACTCGCTCCAACTTTACTAGCCATCTTTATGACGCTTTCCGCATAAAACACATCACAACCTACATAGACTACCAACTCCTCAAAGGAGATGACATCTCACAATCACTTCTGCAAGCTATCCAGGATTCATATATATCCGTGGTGGTCTTCTCTGAAAATTATGCTTCTTCGAGATGGTGCTTGGATGAGCTCACCCATATACTCCATTGCAAAAGTGTTCAAGGACAGATTGTTGTTCCTGTCTTCTATAAAGTTGAGCCAACTCATGTACGCAATCAGACTGGGAATTACAAGCAAGCTTTTGAGAAATATGAGAGAGACCGCCTCAAGTTTCCGGAACATAAGATACAAATGTGGAAGCAAGCTCTTCATGAAGCTGCAGGCTTAGCTGGATATGAGAGATATGACTCTCACAAATTCAGTAATGAATCTGAATTGATTCAAAAGATTGTCGAAGATATACGGCTCAAATTAGATCATTTGTATCCACCTGCTCAGTTAAAAGGACTTGTAGGTATTGATGACAATTGTGCAGAGATTGAATCATTGTTGGGACGTGCTGAAACCATTGGAATATGGGGCATGGGGGGCATCGGCAAATCAACCATTGCCAGAACTATATTCTTTAAATATTCTTCCCATTATGAAGGTTCTTACTTCTTGGAAAACGTAAGGGAAAAGTCTAAAAATGGACTTGATGAATTACGCCAGAAATTTCTCTCCTGTCTAATGAATGAAGATATTCGTATTAATACTTTAACCACTTTTCTTGAGTCTAGACTCAGTCGTATGAAAGTTTTTGTTGTTCTTGATGACATCAGTACGATGGATCAATTAAAATATTTGGTTGGAGAACCACCTCATTGCTTTGGTCAAGGAAGTAAAATTCTCATCACTACAAGGGAGAAGCATGTGCTAAGCAAAGGAGTTGATGAAATATATAAGGTTAAGGAATTAGAGTTGGGTCACTCCTATAAACTTTTCAACTTACATGCCTTCAACACTGACGGGCCTATAATGGGATACAAAGAGCTAACAGTAAGGACGGTTGTTTATGCAAAAGGAGTTCCATTGGCTTTAAAAGTTCTGGGATCATATTTTCGTGGCACAAGTAAAGACGAATGGGAGAGTGCTTTAAGAAAACTTGAGAAGAGTCCCCATGAAGATATTCAAAAAGTGTTAAGATTGAGTTATGACGAACTGGATCATGAACAGAAGAGAATATTTCTAGACATTGCTTTCTTTTTAAAGGGAGAGCGGACAGAATTTGTTATCAACTTGTTAGATAGCTTTGGCTTCCATGGAGCTATTGGCATAAAAATACTTCATGACAAGGCTCTCATAAATGTTGATGATGGTTGGGATATTAAAATGCATGATTTGATACAAGAGATGGGTTTACAAATAGTTCGTGAAGAATCTAACGATGAACCTGAAAGACGTAGTCGATTATGTGATTCTAAGGAAATCTATGATATTTTGGATAATAATATGGGATCAAGCAAAGTCGAAGGCATAAAGTTAAACGTTTCTGAAATTAGAGATATATATTTAGAAGTTGATGTTTTCAAGAAGATGCGAAAATTAAGATATTTCAATTTTCATTCTAACAGTGGCCCAAGTCATGTGCACCTTCCTAAAGGTCTCAAATTTCTTCCTAATACAGTGAGGTATCTAGAGTGGTGTAGATTTCCACTTAAATCTCTGCCGTCGACTTTTTGTCCTAAAAACCTTGTCAAGCTCTGTATGCGCAATAGCCATCTTCAAAAGCTTTGGAACGGAGTGCAGGATGTAGCGAACTTACAAGAGATAGACCTTGATGGTTCCAAACAGCTACAGGAGCTACCGGATCTCTCTAAATGCTTGAATCTCAAAGTAGTAAAACTTCGTGACTGCGAAAGTTTGTGCTATGTTCATTCCTCAATTTTGTCTCTCCACTCGCTTGTTGAATTGGACTTATCTGCGTGCAAGAAACTTAGGAGTCTGAAAAGTGAGGTTCATTTGAATTCTCTACAACAAATTGTTGTCTCTTCTTGCTCGAATCTTAAGGAATTCTCACTGTCATCAGACGAACTGAGATACTTGAACTTTGATTTCACGGGAATTGAAATCTTGGACTCGGCTGTTGGTCGTTCAATTAAATTGGAATCCCTCAAACTTAATGGTGGAGGACTTGTGGGCCTTCCAAACCAATTATCTCGCTTGACAAGTTTGACGAGTTTTGAGCTTTCCGGCTGTGAATATATTGATGATTCGAAGCTACATCACTTCTTTGATGGCATGTTGTCTTTAAGAAATGTGCAATTGTACTGTTGTTGTAACATAGTTAATTTCCCCGATAATACTAAACATCTTTTAGGATTGAAATGTCTTATCTTAAAGGGTTGTAGGAGGCTCCGCTCTTTACCAGAACTACCACCATCCATTTCAACCCTGGATACTAGTGGTTGTGAATCATTGGAAATTGTGCCAACTTGGAGAGAATTAAGTGGTGGCTCAAAATATTTCTCATTCATGGGTTGCAAGCAATTGAATGAACAATCACTTCACAATATCATAGAGGCTGCCTCTTGTTTAATTCATCATGCACCGCATGAAAATACGGAGTACATGGATAATGATTATTCGATTATAGTCCCTGGAAGCAAAGTACCAAAGTGGTTCAATTACAAGGCAGCAAAAAGCTCCGTGGTAGTTGAACTCCCTCAAATTTCAGACTTGGTGGATTTCTTCTTCTGCATTGTATTTGGTTCGAAATCAGAATATTATTTGGATATTTCATGCAAATGCTACTTGGAAGATATTGAGGTGGCTTATTCATATGAAGTGCTGGATGTTACATGGATGGAATCTGATCATGTTTATATATTTAATGATGCCTGTAGAGGTGGATTTTTGAATGAACGGATGACGGATGCATTTAGAAGAGGAAATCAAAAGTTGTTCGCTAACAGAAAGCTTCGGTTTGAATTCACTGTGGAAAAACTTAGGAAAATGGATGATGATGATGAAAATGATGATGATGATGATGTGTCTAGCGAGGTAATGATCAAAGAATGCGGGGTGCGGCCAGTGTATGTCTCAGAATGTGAGAAATTTGTTAAGTGCAAGAGAGTTGCAGATATCTGTGTGGAAGATCTTCTCCCTCCCACAATGAAGCTCAAGAATTCTGGTGTCTCCCAATCCACTCACCTGGGATTGGAATTGGAGTTGGGGTTGGCTACTGCTAAATCCAAGAAATCTTGTGTAGAGAAAATGGAAATGGAGAGGAAAAAGAAGAGGGTTGCAGATATCTGTGTGGAAGATCTTCTCCCTCCCACAAAGAAACTCAAGAATTCTGGTGTCTCTCAATCCACTCCCCTGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGGATTGGACTTGGAGTTGGGGTTGGCTACTGCTAAATCCAAGAAATCTTGCGATAGCTTCACATGTCACCCTTGCAACTCAAATTTATTAGCAAGATAA 3627 0.3915 MALVAASSSSSAQSLPKKYDVFISFRGEDTRSNFTSHLYDAFRIKHITTYIDYQLLKGDDISQSLLQAIQDSYISVVVFSENYASSRWCLDELTHILHCKSVQGQIVVPVFYKVEPTHVRNQTGNYKQAFEKYERDRLKFPEHKIQMWKQALHEAAGLAGYERYDSHKFSNESELIQKIVEDIRLKLDHLYPPAQLKGLVGIDDNCAEIESLLGRAETIGIWGMGGIGKSTIARTIFFKYSSHYEGSYFLENVREKSKNGLDELRQKFLSCLMNEDIRINTLTTFLESRLSRMKVFVVLDDISTMDQLKYLVGEPPHCFGQGSKILITTREKHVLSKGVDEIYKVKELELGHSYKLFNLHAFNTDGPIMGYKELTVRTVVYAKGVPLALKVLGSYFRGTSKDEWESALRKLEKSPHEDIQKVLRLSYDELDHEQKRIFLDIAFFLKGERTEFVINLLDSFGFHGAIGIKILHDKALINVDDGWDIKMHDLIQEMGLQIVREESNDEPERRSRLCDSKEIYDILDNNMGSSKVEGIKLNVSEIRDIYLEVDVFKKMRKLRYFNFHSNSGPSHVHLPKGLKFLPNTVRYLEWCRFPLKSLPSTFCPKNLVKLCMRNSHLQKLWNGVQDVANLQEIDLDGSKQLQELPDLSKCLNLKVVKLRDCESLCYVHSSILSLHSLVELDLSACKKLRSLKSEVHLNSLQQIVVSSCSNLKEFSLSSDELRYLNFDFTGIEILDSAVGRSIKLESLKLNGGGLVGLPNQLSRLTSLTSFELSGCEYIDDSKLHHFFDGMLSLRNVQLYCCCNIVNFPDNTKHLLGLKCLILKGCRRLRSLPELPPSISTLDTSGCESLEIVPTWRELSGGSKYFSFMGCKQLNEQSLHNIIEAASCLIHHAPHENTEYMDNDYSIIVPGSKVPKWFNYKAAKSSVVVELPQISDLVDFFFCIVFGSKSEYYLDISCKCYLEDIEVAYSYEVLDVTWMESDHVYIFNDACRGGFLNERMTDAFRRGNQKLFANRKLRFEFTVEKLRKMDDDDENDDDDDVSSEVMIKECGVRPVYVSECEKFVKCKRVADICVEDLLPPTMKLKNSGVSQSTHLGLELELGLATAKSKKSCVEKMEMERKKKRVADICVEDLLPPTKKLKNSGVSQSTPLGLGLGLGLGLGLGLGLGLGLGLGLGLGLDLELGLATAKSKKSCDSFTCHPCNSNLLAR 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00336 1208 PRINTS Disease resistance protein signature 672 688 - -
Accr6g00336 1208 PRINTS Disease resistance protein signature 218 233 - -
Accr6g00336 1208 PRINTS Disease resistance protein signature 289 303 - -
Accr6g00336 1208 PRINTS Disease resistance protein signature 382 396 - -
Accr6g00336 1208 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 717 IPR044974 GO:0006952
Accr6g00336 1208 Gene3D Ribonuclease Inhibitor 530 715 IPR032675 -
Accr6g00336 1208 Pfam TIR domain 18 191 IPR000157 GO:0007165
Accr6g00336 1208 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 161 IPR035897 -
Accr6g00336 1208 Pfam C-JID domain 908 1059 IPR045344 -
Accr6g00336 1208 Pfam NB-ARC domain 218 431 IPR002182 GO:0043531
Accr6g00336 1208 ProSiteProfiles TIR domain profile. 17 187 IPR000157 GO:0007165
Accr6g00336 1208 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 189 - -
Accr6g00336 1208 SMART till_3 18 158 IPR000157 GO:0007165
Accr6g00336 1208 FunFam Disease resistance protein RPS4 529 719 - -
Accr6g00336 1208 Gene3D - 189 345 IPR027417 -
Accr6g00336 1208 Pfam Leucine Rich Repeat 606 625 IPR011713 -
Accr6g00336 1208 Gene3D Ribonuclease Inhibitor 716 890 IPR032675 -
Accr6g00336 1208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 441 IPR027417 -
Accr6g00336 1208 FunFam Disease resistance protein (TIR-NBS-LRR class) 350 431 - -
Accr6g00336 1208 Gene3D - 16 188 IPR035897 -
Accr6g00336 1208 SUPERFAMILY L domain-like 486 881 - -
Accr6g00336 1208 Gene3D - 348 431 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00336 Accr-Chr6 5331391 5336050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00336 17 854 WRKY Transcription Factor Family AT4G12020 31.908 2.09e-89 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00336 - - pcin:129288061 1148.27