Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00335 ATGGCTCTTGTTGCTGCTTCATCCTCGTCATCTGCTCAATCTCTCCCCAAGAAGTATGATGTATTCATCAGCTTTAGGGGTGAGGACACTCGTTCCAACTTCACTAGCCATCTGTTTGACGCTTTCTGGAGGAAACACATCACAACCTATATAGACTACCAACTCCTCAAAGGAGATGAGATCTCACAATCACTTCTGCAAGCTATCGAGGATTCATATATATCTGTGGTGGTTTTCTCTGAAGATTATGCTTCTTCGAGATGGTGCTTGGATGAACTCTCCCATATACTTCATTGCAAAAGGTCTCAAAGACAGATTGTTGTTCCTATCTTCTATAAAGTTGAGCCAACTCATGTACGCAATCAGACTGGGAATTACAAGCAAGCATTTGAGAGATATGAGAGAGACATCAAGTTTGCGGAACGTATGATACAAATGTTGAAGCATCCATTTAGGAGATACGAGAGAGGCCTCAAGGTTCCCCAAGACAAGGTGCAAACTTGGAGGGAAGCTCTTAATGAAGCTGCAAACTTAGCTGGTTATGACTCTCACACATTCAGGGACGAATCTGAAATGATTCAAAAGATTGTTAAAGACATATTGCAAAAATTGAACGATAAGTACCCACCGGCTGAATTAAAAGGACTTGTAGGTATTGATGACACTTGTGCAGAGATTGAATCATTGTTGAGGGATTCTAAAACCATTGGAATATGGGGTATGGGGGGCATCGGCAAATCAACCATTGCCAAAACTATATTTTCCAAATATTCTTCCCATTATGAAGGTTCTTGCTTCTTGGAAAATGTAAGGGAAAAGTCTACAAATGGACTTGATAAATTGCGCCATAAATTTCTCTCCTCTATACTAAAGGAAGATCTCTGCTTGGATACTTCAACCACTCTTCTTGGGTGTAGACTCAGTCGTATGAAAGTTTTTGTTGTTTTTGATGATGTCAGTACGATGGATCAATTAGAATGTTTTAGAGAAACTCATTGCTTTGGTCAAGGAAGTAAAATTCTCATCACTACGAGGGATAAGCATGTGCTAAGCAAAGGAGTTGATGAAATATATAAGGTTAAAGGATTAGAGTTGGATCACTCCTATCAACTTTTCAACTTAAATGCCTTCAACCTCGACAGGTCTAGAATGGGATACGAACAGCTAACAGAAAGGGTGGTTGTTTATGCAAAAGGGGTTCCATTGGCTTTAAAAGTTCTAGGATCATATCTTCGTGGTAGAAGTAAAGACGAATGGAAGAGTGCTTTAAGGGAACTTGAGAAGAGTCCCCATGAAGATATTCAAAAGGTGTTAAGATTGAGTTATGATGGATTGACTCATAAACAACAGAGAATATTTCTAGATATTGCTTGCTTTTTGAAGGGACAGTTGACAGAATCTGTAATCAACTTGTTAGATAGCTTTGGCTTTAATGGAGCTATTAGCATAAGAATACTTCATGACAAGGCTCTCGTAAATGTTGATGATGGTTCAGATATTGAAATGCATGATTTGATACAAGAGATGGGTTTACAAATAGTTCATGAAGAATCTATTGATGAACCTGGAAGACGTAGCCGATTGTGGGATTCTGCAGAAATCTACGATGTTTTGGATAATAATGCGGGATCAAGCAAAGTTGAAGGCATACAGTTGGATGTTTCTGAAATTAGAGATATACATTTGGAAGCTAATGTTTTCAAGAAGATGCCAAATATAAGATATCTCAAATTTCATTCTAGAGACGACCTTGGCTCAAGTCATGTGCACCTTCCTAAAGGTCTCAATTTTCTTCCTAATAAAGTGCGGCATCTAGAGTGGTATGGATTCCCATATAAATCTCTTCCGTCCACTTTTTGTCCTAAAAAACTTGTCAAGTTGTTTATGCCCTATAGCCATCTCCAAAAGCTTTGGAACGGAGTGCAGGATTTAGTGAGCTTACAAGAGATAGACCTTAGTGGTTCCACACAGCTACAGGAGCTACCAGATTTCTCTAAATGCTTGAATCTAAAAGTAGTACACCTTATACATTGTGACAATTTATGCTATGTTCATTCCTCAATCTTGTCTCTCCACTCGCTTGTGGAGTTGAACTTATTTGGGTGCCGAAAACTCAGGAGTTTGAAAAGTGAGATTCATTTGAAATCTCTGGAAGAAATTGATGTGCACAGTTGCTATAATCTTAAGGAGTTCTCACTGTCATCAGAGGAATTGCAATCATTGAGGTTAGGTCAAACAGGAATTGAAATCTTGCACTCATCTGTTGGTCGTTCAATTAAATTAGAAGAACTTGATCTTTGGGGTTTAAGACTTGTGGGCCTTCCAAACCAATTATCTTGCTTCACAAGTTTGACGATTCTTAGGCTTTCCAACTGTGAATTCATTGATGATTCAAAGCTACATGTCTTATTTAATGGCATGTTGTCTTTAAGAGAAGTTCAATTGGATGGTTGTTGTAACATAATTGAACTCCCTAGTAATACTAAACATCTTTTAGGATTGGAATATCTTTCCCTGGAGAAATGTAGGAGGCTTTTCTCTTTACCAGAACTACCACCATCCATTTTAGCCCTAAATACCAATTATTGTGAGTCGTTGGAAATTGTGCCAACTTGGAGACCATTAAATGGTGGCTCGAAATACTTCTCATTTGTGAATTGTGTACAACTGAATGAACAATCACTTCACAATATCATGGAGGCTGCTTATAATGTAATTTATTGTAGATCGCATGAAAATAAGGAGGACATGGATGATGATAAGGAGGACATGAATGATGACATAGAGGTCATGAATGATGGTTTTACGATTATAGTCCCCGGAAGCAAAATACCAAAGTGGTTCAAATTCAGGGCAGCACAAAGCTACTTAGTAGTTGAATGCACTCAAATTTCAGACTCAGTGGATTTCTTCTACTGTGTTGTAATTGGTTTTAAATCAGAAAATGGTTCTGCTGTTAAATTGGGGTGCCAATGCTTCTTGGAAAATTTTCCGGTGGATTGTTCATACCTGAATATTTTAGACACGAAATATGATCATGTTTATATAAGGAATAATGCCTACATTAAGGATGGATGGATGATGCGTGAAATTAGAAGAGGAAATCAACAGTTGTTCGCTAACAGAAACCTTTGCTTTAAATTCACTGAGATAGATCCTGAAGGTCCTGTCATTGACTCATGCAAGGTAATGATCAAAGGATGCGGGGTGTTGCCAGTGTATGCCTCAGAATGGGAGAACTTTCTTGAGCAAATGGAAATTGAGAGGGAATAA 3273 0.3825 MALVAASSSSSAQSLPKKYDVFISFRGEDTRSNFTSHLFDAFWRKHITTYIDYQLLKGDEISQSLLQAIEDSYISVVVFSEDYASSRWCLDELSHILHCKRSQRQIVVPIFYKVEPTHVRNQTGNYKQAFERYERDIKFAERMIQMLKHPFRRYERGLKVPQDKVQTWREALNEAANLAGYDSHTFRDESEMIQKIVKDILQKLNDKYPPAELKGLVGIDDTCAEIESLLRDSKTIGIWGMGGIGKSTIAKTIFSKYSSHYEGSCFLENVREKSTNGLDKLRHKFLSSILKEDLCLDTSTTLLGCRLSRMKVFVVFDDVSTMDQLECFRETHCFGQGSKILITTRDKHVLSKGVDEIYKVKGLELDHSYQLFNLNAFNLDRSRMGYEQLTERVVVYAKGVPLALKVLGSYLRGRSKDEWKSALRELEKSPHEDIQKVLRLSYDGLTHKQQRIFLDIACFLKGQLTESVINLLDSFGFNGAISIRILHDKALVNVDDGSDIEMHDLIQEMGLQIVHEESIDEPGRRSRLWDSAEIYDVLDNNAGSSKVEGIQLDVSEIRDIHLEANVFKKMPNIRYLKFHSRDDLGSSHVHLPKGLNFLPNKVRHLEWYGFPYKSLPSTFCPKKLVKLFMPYSHLQKLWNGVQDLVSLQEIDLSGSTQLQELPDFSKCLNLKVVHLIHCDNLCYVHSSILSLHSLVELNLFGCRKLRSLKSEIHLKSLEEIDVHSCYNLKEFSLSSEELQSLRLGQTGIEILHSSVGRSIKLEELDLWGLRLVGLPNQLSCFTSLTILRLSNCEFIDDSKLHVLFNGMLSLREVQLDGCCNIIELPSNTKHLLGLEYLSLEKCRRLFSLPELPPSILALNTNYCESLEIVPTWRPLNGGSKYFSFVNCVQLNEQSLHNIMEAAYNVIYCRSHENKEDMDDDKEDMNDDIEVMNDGFTIIVPGSKIPKWFKFRAAQSYLVVECTQISDSVDFFYCVVIGFKSENGSAVKLGCQCFLENFPVDCSYLNILDTKYDHVYIRNNAYIKDGWMMREIRRGNQQLFANRNLCFKFTEIDPEGPVIDSCKVMIKGCGVLPVYASEWENFLEQMEIERE 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00335 1090 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 148 IPR035897 -
Accr6g00335 1090 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 206 - -
Accr6g00335 1090 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 735 IPR044974 GO:0006952
Accr6g00335 1090 Gene3D - 363 446 IPR042197 -
Accr6g00335 1090 Pfam Leucine Rich Repeat 623 642 IPR011713 -
Accr6g00335 1090 SMART till_3 18 178 IPR000157 GO:0007165
Accr6g00335 1090 Gene3D - 16 201 IPR035897 -
Accr6g00335 1090 Pfam NB-ARC domain 232 445 IPR002182 GO:0043531
Accr6g00335 1090 SUPERFAMILY L domain-like 516 886 - -
Accr6g00335 1090 ProSiteProfiles TIR domain profile. 17 204 IPR000157 GO:0007165
Accr6g00335 1090 Gene3D - 202 360 IPR027417 -
Accr6g00335 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 456 IPR027417 -
Accr6g00335 1090 Gene3D Ribonuclease Inhibitor 730 871 IPR032675 -
Accr6g00335 1090 Pfam TIR domain 162 218 IPR000157 GO:0007165
Accr6g00335 1090 Pfam TIR domain 18 135 IPR000157 GO:0007165
Accr6g00335 1090 SUPERFAMILY "Winged helix" DNA-binding domain 433 538 IPR036390 -
Accr6g00335 1090 FunFam Disease resistance protein (TIR-NBS-LRR class) 364 446 - -
Accr6g00335 1090 Gene3D Ribonuclease Inhibitor 543 729 IPR032675 -
Accr6g00335 1090 PRINTS Disease resistance protein signature 306 320 - -
Accr6g00335 1090 PRINTS Disease resistance protein signature 397 411 - -
Accr6g00335 1090 PRINTS Disease resistance protein signature 642 658 - -
Accr6g00335 1090 PRINTS Disease resistance protein signature 235 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00335 Accr-Chr6 5324351 5328679 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00335 17 871 WRKY Transcription Factor Family AT4G12020 32.350 2.77e-104 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00335 - - pcin:129288061 1187.17