Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00334 ATGTATCTCAGTAATGAATCTGAATTGATTCAAAAGATTGTCGAAGATATACGGCTCAAATTAGATCATTTGTATCCACCTGCTCAGTTAAAAGGACTTGAAGGTATTGGTGACAAATGTGCAGAGATTGAATCATTGTTGGGACGTGCTGAAACCATTGGAATATGGGGCATGGGGGGCATCGGCAAATCAACCATTGCCAGAACTATATTCTTTAAATATTCTTCCCATTATGAAGGTTCTTGCTTCTTGGAAAACGTAAGGGAAAAGTCTAAAAATGGACTTGATGAATTACGCCAGAAATTTCTCTCCTGTCTAATGAATGAAGATATTCGTATTAATACTTCAACCACTTTTCTTGAGTCTAGACTCAATCGTTTGAAAGTTTTTGTTGTTCTTGATGACATCAGTACGATGGATCAATTAAAATATTTGGTTGGAGAGCCACCTTATTGCTTTGGTCAAGGAAGTAAAATTCTCATCACTACAAGGGAGAAGCATGTGCTAAGCAAAGGAGTTGATGAAATATATAAGGTTAAGGAATTAGAGTTGGGTCACTCCTATAAACTTTTCAACTTACATGCCTTCAACACTGACAGGCCTATAATGGGATACGAAGAGCTAACAGTAAGGACGGTTGTTTATGCAAAAGGAGTTCCATTGGCTTTAAAAGTTCTGGGATCATATCTTCGTGGCACAAGTAAAGACGAATGGGAGAGTGCTTTAAGAAAACTTGAGAAGAGTCCCCATGAAGATATTCAAAAGGTGTTAAGATTGAGTTTTGACGGACTGGATCATGAAGAGAAGAGAATATTTCTAGACATTGCTTGCTTTTTGGAGGAAGAGTGGAAAGAATTTGTTATCAACTTGTTAGATAGCTTTGGCTTCGAAGGAGATAATGGCATAAGAATACTTCGTGACAAGGCTCTCATAAATGTTGATGATGGTTGGCATATTAAAATGCATGATTTGATACAAGAGATGGGTTTACAAATAGTTCGTGAAGAATCTATTGATGAACCTGGAAGACGTAGCCGATTATGGGATTATGCGGAAATTTGTGATGTTTTGGATAATAATGTGGGATCAAGCAAAGTTGAAGGCATAAAGTTAAACGTTTCTGAAATTAGAGATATATATTTGAAAGCTGATGTTTTTAAGAAGATGCGAAAATTAAGATATTTCAATTTTCATTCTAACAGTGGCCCAAGTCATGTGCACCTTCCTAAAGGTCTCAAATTTCTTCCTAAGACAGTGAGGTATCTAGAGTGGTGTAGCTTTCCACTTAAATCCCTGCCGTCCACTTTTTGTCCTAAAAAACTTGTCAAGCTCTATATGCGCAATAGCCATCTTCAAAAGCTTTGGAACGGAGTGCAGGATGTAGCGAACTTACAAGAGATAGACCTTGATGGTTCCAAACAGCTACAGGAGCTACCGGATCTGTCTAAATGCTTGAATCTCAAAGTAGTAAAACTTGGTGACTGCGAAAGTTTGTGCTATGTTCATTCCTCAATTTTGTCTCTCCACTCGCTTGTTGAGTTGGACTTATCTGCGTGCAAGAAACTTAGGAGTCTGAAAAGTGAGGTTCATTTGAAATCTCTACAAAAAATTCGTGTGTCTTTTTGCTCGAATCTAAAGGAATTCTCACTGTCGTCAGACGAACTGAGATACTTGAACTTTGATTTCACGGGAATTGAAATTTTGCACCCGGATGTTGGTCGTTCAATTAAATTGGAATCCCTCGACCTTAATGGTGGAGGACTTGTGGGCCTTCCAAACCAATTATCTCGCTTGACAAGTTTGACGAGTTTTGAGCTTTCCGGCTGTGAATATATTGATGATTCGAAGCTACATCATTTCTTTGATGGCATGTTGTCTTTAATACATGTGCAATTGAACGGTTGTTGTAACATAGTTAATTTCCCCGATAATACTAAACATCTTTTAGGATTGGAATGTCTTATCTTAAAGGGTTGTAGGAGGCTCCGCTCTTTACCAGAACTACCACCATCCATTTCAACCCTAAATGCTAGTTATTGTGAGTCGTTGGAAATTGTGCCAACTTGGAGAGAATTAAGTGCTGGCTCAAAAATATTCTCATTCGTGGATTGCAGGCAATTGAATGAACAATCACGTCACAATATCATAGAGGCTGCCTCTTGTTTAATTTATCTTGCACCGCATGGAAATACGGAGGACATGGATAACGATTATTCGATTATAGTCCCAGGAAGCAAAGTACCAAAGTGGTTCAAATACAGGGCAGCGCAAAGCTCCGTGGTGGTTGAGCTCCCTCAAATTTCAAACTTGGTGGATTTCTTCTTCTGCATTGTAATTGGTTTTAAATCAGAAATTAGTTTTGATGTTTCATTGAAATGCAAATGCTACTTGGAAGATTTGGAGGTGGCTTATTCATATGAAGAGGTGGATGTTTCAGGGATGAAAGATGATCATGTTTATATATTTAATGATGCCTGTAGAAGTGAATGGTGGGATGGACGGATGACGGATGCAATTAGAAGAGGAAATCAAAAGTTGTTCGCTAACAGAAAGCTTCGCTTTGAGTTCACTGTGAAAAATATTGGGGAATCAGGTGATGATGATGAGGATGATGATGATGATGATTATGAGGATGATGATTATTATGATGTGTCTAGCGAGGTAATGATCAAAGAATGCGGGGTGCGGCCAGTGTATGTCTCAGAATGTGAGAAATTTGTTAAGCGGAAGAGAGTTGCAGATATCTGTGTGGAAGATCTTCTCCCTCCCACAAAGAAATTCAAGAATTCCGGTGTCTCTCAATCCACTCCCCTGGGATTAATTGGAGCAGGGTTGGCTAGTGCTAAATCTAAGAAATCTTGTGATAGCTTCATCTGTCACCCCTTGCAATTCAAATTTATAAGCAAGATGAAAGAAACCGACCCTTTGCAGCTCAGCTTAAATGTATCAACTACACAAAGGATGAGTACAACCGGATGCTACCAAAGCAGAACTTGA 2997 0.3877 MYLSNESELIQKIVEDIRLKLDHLYPPAQLKGLEGIGDKCAEIESLLGRAETIGIWGMGGIGKSTIARTIFFKYSSHYEGSCFLENVREKSKNGLDELRQKFLSCLMNEDIRINTSTTFLESRLNRLKVFVVLDDISTMDQLKYLVGEPPYCFGQGSKILITTREKHVLSKGVDEIYKVKELELGHSYKLFNLHAFNTDRPIMGYEELTVRTVVYAKGVPLALKVLGSYLRGTSKDEWESALRKLEKSPHEDIQKVLRLSFDGLDHEEKRIFLDIACFLEEEWKEFVINLLDSFGFEGDNGIRILRDKALINVDDGWHIKMHDLIQEMGLQIVREESIDEPGRRSRLWDYAEICDVLDNNVGSSKVEGIKLNVSEIRDIYLKADVFKKMRKLRYFNFHSNSGPSHVHLPKGLKFLPKTVRYLEWCSFPLKSLPSTFCPKKLVKLYMRNSHLQKLWNGVQDVANLQEIDLDGSKQLQELPDLSKCLNLKVVKLGDCESLCYVHSSILSLHSLVELDLSACKKLRSLKSEVHLKSLQKIRVSFCSNLKEFSLSSDELRYLNFDFTGIEILHPDVGRSIKLESLDLNGGGLVGLPNQLSRLTSLTSFELSGCEYIDDSKLHHFFDGMLSLIHVQLNGCCNIVNFPDNTKHLLGLECLILKGCRRLRSLPELPPSISTLNASYCESLEIVPTWRELSAGSKIFSFVDCRQLNEQSRHNIIEAASCLIYLAPHGNTEDMDNDYSIIVPGSKVPKWFKYRAAQSSVVVELPQISNLVDFFFCIVIGFKSEISFDVSLKCKCYLEDLEVAYSYEEVDVSGMKDDHVYIFNDACRSEWWDGRMTDAIRRGNQKLFANRKLRFEFTVKNIGESGDDDEDDDDDDYEDDDYYDVSSEVMIKECGVRPVYVSECEKFVKRKRVADICVEDLLPPTKKFKNSGVSQSTPLGLIGAGLASAKSKKSCDSFICHPLQFKFISKMKETDPLQLSLNVSTTQRMSTTGCYQSRT 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00334 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 275 IPR027417 -
Accr6g00334 998 FunFam Disease resistance protein RPS4 363 553 - -
Accr6g00334 998 Pfam C-JID domain 742 903 IPR045344 -
Accr6g00334 998 Gene3D Ribonuclease Inhibitor 364 545 IPR032675 -
Accr6g00334 998 Pfam NB-ARC domain 52 257 IPR002182 GO:0043531
Accr6g00334 998 SUPERFAMILY L domain-like 335 693 - -
Accr6g00334 998 Gene3D Ribonuclease Inhibitor 546 709 IPR032675 -
Accr6g00334 998 FunFam Disease resistance protein (TIR-NBS-LRR class) 184 265 - -
Accr6g00334 998 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 551 IPR044974 GO:0006952
Accr6g00334 998 Gene3D - 27 176 IPR027417 -
Accr6g00334 998 SUPERFAMILY "Winged helix" DNA-binding domain 252 357 IPR036390 -
Accr6g00334 998 Pfam Leucine Rich Repeat 440 459 IPR011713 -
Accr6g00334 998 Gene3D - 182 265 IPR042197 -
Accr6g00334 998 PRINTS Disease resistance protein signature 506 522 - -
Accr6g00334 998 PRINTS Disease resistance protein signature 216 230 - -
Accr6g00334 998 PRINTS Disease resistance protein signature 123 137 - -
Accr6g00334 998 PRINTS Disease resistance protein signature 52 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00334 Accr-Chr6 5311585 5314968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00334 5 698 WRKY Transcription Factor Family AT4G12020 34.488 1.07e-82 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00334 - - pcin:129288061 923.694