Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00331 ATGGCCCTTGTTGCTGCTTCATCCTCTTCATCTGCCGAATCTCTCCCCAAGAAGTATGATGTTTTCATCAGTTTCAGGGGTGAGGACACTCGCTCCAACTTTACGAGCCATCTTTATGACGCTTTCTGCAGAAAACACATCAGAACCTACATAGACTACCAACTCGCCAAAGGAGATGACATCTCACCATCTCTTCTGCAAGCTATCGAGGATTCATATATATCTGTGGTGGTCTTCTCTGAAAATTATGCCTCTTCAAGATGGTGCTTGGATGAACTCATCCATATACTCCATTGCAAAAGGGTTAAAGGACAGATTGTTGTTCCTGTCTTCTATAAGGTTGAGCCATGTCATGTACGAAATCAGACTGGGGTTTACAGACAAGAATTTGAGAGATACGAGAGAGATCTCAAGGTTGACCAACACAAGATGCAAATGTGGAAGCAAGCTCTTCATGAAGCTGCAAACTTGGCTGGGTATGACTCTCAAACGTTCAGGGACGAATCTGAAATGATTCAAAAGATTGTCAAAGACATATTGCAGAAATTGATCTACAAGTACCCACCTGCTGAATCAAAAGGACTTGTAGGTATTGATGACAATTGTGCAGAGATTGAATCATTGTTGAGACGTGCTAAAACCATTGGAATATGGGGCATGGGGGGCATCGGCAAATCAACCATTGCCCAAACTATATTTTCCAAATATTCTTCCCATTACCAAGGTTCTTGCTTCTTGGAAAATGTAACGGAAAAGTCAAGAAATGGACTTGCTAAATTACGCGATAAATTTCTCTCCCGTGTATTAAAGGAAGATCTCTGTATGGATACTTCAACCACTTTTCTTGAGTCTAGACTTAGTCGTATGGAAGTTTTTGTTGTTCTTGATGATGTTAGTACAGTGGAGCAATTAGAATATTTGGTTGGGGAACCTCATTGCTTTGGTCGAGGAAGTAAAATTCTCATCACTACAAGGAATAGGCACGTTCTGATTAGCAAAGGAGTTGATGAAATATATAAGGTTAAGGAATTAGATTTGGATCACTCCTTTAAACTTTTCAACCTAAATGCCTTCAACATTGACAGGCCTATAATGGGATACAAAGAGCTAACAGAAAGGGTGGTTGTTTATGCAAAAGGAGTTCCATTGGCTTTAAAAGTTCTGGGATCATATCTTCGTGGCAAAAGTGAAGTCGAATGGGAGAGTGCTTTAAGAAAACTTGAGAAGAGTCCCCATGAAGATATTCAAAAGGTGTTAAGATTGAGTTATGACGGATTGAATCATGAAGAGAAGAGAATATTTCTAGACATTGCTTGCTTTTTTAAGGGAGAGTTGACAGAATCTGTAATCAACTTGTTAGATAGCTTTGGCTTCCATGGAGCTATTGGCATAAGAATACTTCATGATAGGGCTCTCATAGATGTTGATGATGGTTGGCATATAAAAATGCATGATTTAATACAAGAGATGGGTTTACAAATAGTTCGTGAAGAATCTATTAATGAACCTGGAAGACGTAGTCGATTATGGGATTCTGCGGAAATCTATGATGTTTTGGATAATAATGTGGGATCAAGAAAAGTTGAAGGCATACAGTTGGACGTTTCTGAAATTAGAGATATATATTTGGAAGCTGATGTTTTCAAGAAGATGCCAAATTTAAGATATATCAAATTTCATTCTCGTTTCAACCTTGGCTCAAGTCATGTGCACCTTCCTAAAGGTCTCAAATTTCTTCCTAATAAAGTGAGGTATCTGGAGTGGTATAGATTTCCACTTAAATCTCTACCGTCCACTTTTTGTGCTGAGAAACTTGTTAAACTCTACATGCCTAAAAGCCATCTTCAAAAGCTTTGGAACGGAGTGCAGGATTTAGTGAGCTTACAAGAGATAGACCTTAGTGGTTCCACACAGCTACAAGAGCTACCGGATCTCTCTAAGTGCTTGAATCTAAAAGTAGTACACCTTATGCATTGTGAAAGTTTGTGCGATGTTCATTCCTCAGTTTTGTCTCTCCACTCGCTTGTTAAGTTGAACTTATATGGGTGCATGAAACTCAAGAGTCTGAAAAGTGAGATTCATTTGAAATCTCTACAAAATATTGATGTGGACCGTTGCTATAATCTTAAGGAGTTCTCACTGTCATCAGACGAACTGAGATTGTTGAAGTTAGATCAAATAGCAATTGAAATCTTGCACTCGTCTGTTGGTCGTTCAATTAATTTGGAAGAACTCAATCTTTGTGGTTTCAGACTTATGGGCCTTCCAAACCAATTATCTTGCTTGACAAGTTTGACGATTCTTAGGCTTTCCAATTGTGAATTCATTGATGATTTAAAGCTGCATGTCTTTTTTAATGGCATGTTGTCTTTAAGAGAAGTGGTATTGGACGGTTGTTGTAACATAATTGAACTCCCCAATAATACTAAACATCTTTTAGGATTGGAACGTCTTATGCTACTAAATTGTAGAAGGCTCTTCTCTTTACCAGACCTACCACCATCCATTTCAGAACTATTTGTTGTTGAGAATAAGTTGTTGGAAATTGTGCCAACTTGGAGACCATTAAGTGATGACTCGAAATACTTCTCATTTGCAAATTGTGTGCAACTGAATGAACAATCACTTCACAATATCATGGAGGCTGCCTCGTATGTAACTTATTATAGATCACATGAAAATACGATTGACAGGAATGATTATTTTTCAATTATATCCCCTGGAAGCAAAGTACCAAAGTGGTTCAAATACAAGGAAGCACAAAGCTCCGTGGTAGTTGAACTTTTTAAAATTTCAGACCTGGCGGATTTCGTCTTCTGCATTGTAATTGGTTTTAAATCAAAATTTGGTGGTAAATTTCGATTTGAATGCAAATGCGACTTGGAAGATTTTAAGGTGGATTTTTCACATCACATGAATATTTTAGACACGACATATGATCATGTTTATATATGGAATGTTGCGTACAGAGATGTATGGATGATGCATGAATTTAGAATAAGAAATCAACAGTTGTTCACTAACATAAAGCTTTGCTTTAAATTCACTGTGATATATCTTGAAGGTCCTTGTCTTGATTCTAGCAAGGCAATGATCAAAGGATGCGGGGTGTTGCCAGTGTATGCCTCGGAATGTGAGAAATTTGTTGAGCAAATGGAAATGGAGAGGAAAAAGAAGAAGGTTGCAGATATCTGTGTGGAAGATCTTCTCCCTCCCACAAAGAAACTCAAGAATTCTGGTGTCTATCAACTCACTCCCCAAGGCTCCAAGAAATCTTGTGATAACTGCATCTGTCACCCCTTGCAACTCAAATTTATGAGCAAGATGAAAGAAAAAGACCCCCTGCAGCTTTAA 3354 0.3813 MALVAASSSSSAESLPKKYDVFISFRGEDTRSNFTSHLYDAFCRKHIRTYIDYQLAKGDDISPSLLQAIEDSYISVVVFSENYASSRWCLDELIHILHCKRVKGQIVVPVFYKVEPCHVRNQTGVYRQEFERYERDLKVDQHKMQMWKQALHEAANLAGYDSQTFRDESEMIQKIVKDILQKLIYKYPPAESKGLVGIDDNCAEIESLLRRAKTIGIWGMGGIGKSTIAQTIFSKYSSHYQGSCFLENVTEKSRNGLAKLRDKFLSRVLKEDLCMDTSTTFLESRLSRMEVFVVLDDVSTVEQLEYLVGEPHCFGRGSKILITTRNRHVLISKGVDEIYKVKELDLDHSFKLFNLNAFNIDRPIMGYKELTERVVVYAKGVPLALKVLGSYLRGKSEVEWESALRKLEKSPHEDIQKVLRLSYDGLNHEEKRIFLDIACFFKGELTESVINLLDSFGFHGAIGIRILHDRALIDVDDGWHIKMHDLIQEMGLQIVREESINEPGRRSRLWDSAEIYDVLDNNVGSRKVEGIQLDVSEIRDIYLEADVFKKMPNLRYIKFHSRFNLGSSHVHLPKGLKFLPNKVRYLEWYRFPLKSLPSTFCAEKLVKLYMPKSHLQKLWNGVQDLVSLQEIDLSGSTQLQELPDLSKCLNLKVVHLMHCESLCDVHSSVLSLHSLVKLNLYGCMKLKSLKSEIHLKSLQNIDVDRCYNLKEFSLSSDELRLLKLDQIAIEILHSSVGRSINLEELNLCGFRLMGLPNQLSCLTSLTILRLSNCEFIDDLKLHVFFNGMLSLREVVLDGCCNIIELPNNTKHLLGLERLMLLNCRRLFSLPDLPPSISELFVVENKLLEIVPTWRPLSDDSKYFSFANCVQLNEQSLHNIMEAASYVTYYRSHENTIDRNDYFSIISPGSKVPKWFKYKEAQSSVVVELFKISDLADFVFCIVIGFKSKFGGKFRFECKCDLEDFKVDFSHHMNILDTTYDHVYIWNVAYRDVWMMHEFRIRNQQLFTNIKLCFKFTVIYLEGPCLDSSKAMIKGCGVLPVYASECEKFVEQMEMERKKKKVADICVEDLLPPTKKLKNSGVYQLTPQGSKKSCDNCICHPLQLKFMSKMKEKDPLQL 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00331 1117 PRINTS Disease resistance protein signature 214 229 - -
Accr6g00331 1117 PRINTS Disease resistance protein signature 378 392 - -
Accr6g00331 1117 PRINTS Disease resistance protein signature 623 639 - -
Accr6g00331 1117 PRINTS Disease resistance protein signature 285 299 - -
Accr6g00331 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 437 IPR027417 -
Accr6g00331 1117 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Accr6g00331 1117 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 713 IPR044974 GO:0006952
Accr6g00331 1117 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 185 - -
Accr6g00331 1117 Gene3D Ribonuclease Inhibitor 526 717 IPR032675 -
Accr6g00331 1117 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Accr6g00331 1117 SUPERFAMILY L domain-like 482 872 - -
Accr6g00331 1117 Pfam TIR domain 18 189 IPR000157 GO:0007165
Accr6g00331 1117 Pfam C-JID domain 907 1045 IPR045344 -
Accr6g00331 1117 Pfam NB-ARC domain 214 424 IPR002182 GO:0043531
Accr6g00331 1117 Gene3D - 16 182 IPR035897 -
Accr6g00331 1117 SMART till_3 18 157 IPR000157 GO:0007165
Accr6g00331 1117 Pfam Leucine Rich Repeat 604 623 IPR011713 -
Accr6g00331 1117 Gene3D Ribonuclease Inhibitor 718 935 IPR032675 -
Accr6g00331 1117 Gene3D - 344 427 IPR042197 -
Accr6g00331 1117 FunFam Disease resistance protein (TIR-NBS-LRR class) 345 427 - -
Accr6g00331 1117 Gene3D - 183 337 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00331 Accr-Chr6 5220429 5227656 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00331 14 852 WRKY Transcription Factor Family AT4G12020 33.487 4.16e-111 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00331 - - pcin:129288061 1224.92