Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00329 ATGTTGACCTGCATTGCGTGTTCCAAGCAGCTTAATGACAAGAGATCTCTTCCCCAACAAGATGAGCAAGAAGAAGCTGTTGATACACCCAGTACCAAGCAGGCCATTAAGGCCCTCACCGCACAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCATACAAAAATTGCAAGCCGTGTTCAGGATCTTCAAATGGTAACAGGAACCAGAACTATGCTGATTCTGATATGGCTTCAGAATCAGCTAAATTTCACTGGGCATACAAGAGGACTGGGAGCTCCAACTCAACCCCAAGACTTTGGGGAAAAGAGATGGAGGCAAGACTGAAAGGGCTCTCTAGTGGTGAAGGAACTCCGGCGTCGGTGAGTGGCCGGACTGAATCGGTGGTGTTCATGGAGGAGGATGAGCCCAAGGAATGGGTTGCTCAAGTAGAGCCTGGGGTGCTCATCACTTTTGTTTCATTGCCTCAAGGTGGCAATGATCTGAAACGAATTCGGTTCAGCCGGGAAATGTTTAATAAATGGCAAGCTCAAAGGTGGTGGGCTGAGAATTATGAAAAGGTCATGGAGTTGTACAATGTTCAGAGATTCAATGAACAAGTAGGTCCCCTGCCAACCCCGCCGAGATCCGAAGATGAGAGCTCGAAGATTGAATCTGTTAGGGACAGCCCAGTCACGCCCCCTCTGAACAAAGAGCGTCCACTGCATCATCTTCTTCACCGTCAAATGGGGATGGGATACTCCTCATCAGATTCGCTGGATCATCTTCACCACACGATGCAACAACGGCCGTGCTATGAGACGAGTGGCTTTGCTTCTACACCTAAACTTTCTGGCATTAGTGGGGTAAAGACTGAAACATCATCGTTAGATGGTTCTGTGAGGACTAGTTCGTCAAGGGAGGGAGATCAGTCTGGCGAGCTTTCACTCAGCAATGCCAGTGATATGGAGACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACCATCAGAGCCCTACCAGGAGGAGCCAGAGAACTCAGGCGTGTGCGGTTCAGCCGAGAAAGGTTTGGGGAAACGCACGCGAGGTTGTGGTGGGAGGAGAACCGAGCGAGAATACAGGAGCAATATTTGTGA 1122 0.4964 MLTCIACSKQLNDKRSLPQQDEQEEAVDTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNGNRNQNYADSDMASESAKFHWAYKRTGSSNSTPRLWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYEKVMELYNVQRFNEQVGPLPTPPRSEDESSKIESVRDSPVTPPLNKERPLHHLLHRQMGMGYSSSDSLDHLHHTMQQRPCYETSGFASTPKLSGISGVKTETSSLDGSVRTSSSREGDQSGELSLSNASDMETEWVEQDEPGVYITIRALPGGARELRRVRFSRERFGETHARLWWEENRARIQEQYL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00329 373 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Accr6g00329 373 Pfam Transcription factor regulating root and shoot growth via Pin3 317 372 IPR013591 -
Accr6g00329 373 ProSiteProfiles BRX domain profile. 318 373 IPR013591 -
Accr6g00329 373 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
Accr6g00329 373 MobiDBLite consensus disorder prediction 12 31 - -
Accr6g00329 373 MobiDBLite consensus disorder prediction 268 317 - -
Accr6g00329 373 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Accr6g00329 373 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 373 IPR044532 -
Accr6g00329 373 MobiDBLite consensus disorder prediction 200 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00329 Accr-Chr6 5165302 5168471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00329 1 373 Major Intrinsic Protein MIP AT1G31880 45.780 1.08e-99 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00329 - - cave:132186704 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00329 6 5165302 5168471 Accr6g00329 6 5165302 5168471 ECH