Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00319 ATGGGAAGGAGTCCTTGCTGTGCAAAGGAAGGTATGAACAGAGGAGCATGGACAGCCATTGAAGACAAGATTCTCACTGATTACATTAAGATTCATGGTGAAGGAAAATGGCGACACCTTCCCAAAAGAGCAGGTCTGAAGAGATGTGGGAAGAGTTGTAGGCTGAGATGGTTAAATTATCTAAGACCTGATATCAAAAGAGGAAATATTACTCATGACGAAGAGGATCTCATTATCAGACTTCACAATCTTCTGGGAAACAGGTGGTCTTTGATTGCTGGACGACTACCAGGACGAACAGACAATGAAATAAAGAATTATTGGAACACCAACATCGGAAAGAAGCTTCAAAATAATGGTAACTCAAAAACAAAGTCCTCTCCCACTTCAAGCGGTTCGCCCCCAAGCCGAGCCAGACAGGACAAAGACATGGACCCGGACCCGGACCTGGAGCAAAAAGTCCTCCAAAAAACGGCCGGTTCATGCTTGGTACGAACCAAAGCAACAAGGTGCACCAAAGTGATAGTGAGCCGAGAAATCCAACCATTAAAGGCCGTACCATCTGTGACCATTCATGATGAGGACGAGAAAGTTAGGCGTGATCATGACGAGAAAATAATGGAGGCACCTTTACCACGTTTTATGGATTCCGAGGGAAATAACCTTAATAATAATGATGATGATGAAGAAAATAATAATACAAACAACGAATTAGATTTCATGGCCGATTTCGAAATGGATGAGGGCTTCTTTTCGGATCTTCTGAATATGGATATATCCGAACCGGCATCTTGTTTTGAGAACAAGGTCGTAGTGGAGGAGGAAGACAACACTAATGGCAACGTCACTACTAGTGAAGGTGGTGTTCGTCAACAGTTGGCTTCACCAGTAGTGTCTAATGACGACACGCATTTGAATAATAATAACACTAATGTTTCTGAGGATTCATTGCATGAAGCTGAGGATTTTAAGTCAATGTCAGCTTTAATGGAGAATGAATTTGATTGGCTTTGA 1014 0.4231 MGRSPCCAKEGMNRGAWTAIEDKILTDYIKIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITHDEEDLIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGKKLQNNGNSKTKSSPTSSGSPPSRARQDKDMDPDPDLEQKVLQKTAGSCLVRTKATRCTKVIVSREIQPLKAVPSVTIHDEDEKVRRDHDEKIMEAPLPRFMDSEGNNLNNNDDDEENNNTNNELDFMADFEMDEGFFSDLLNMDISEPASCFENKVVVEEEDNTNGNVTTSEGGVRQQLASPVVSNDDTHLNNNNTNVSEDSLHEAEDFKSMSALMENEFDWL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00319 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr6g00319 337 Gene3D - 14 66 - -
Accr6g00319 337 CDD SANT 16 61 IPR001005 -
Accr6g00319 337 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr6g00319 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr6g00319 337 MobiDBLite consensus disorder prediction 112 149 - -
Accr6g00319 337 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Accr6g00319 337 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr6g00319 337 FunFam MYB-related transcription factor 13 66 - -
Accr6g00319 337 SMART sant 66 114 IPR001005 -
Accr6g00319 337 SMART sant 13 63 IPR001005 -
Accr6g00319 337 MobiDBLite consensus disorder prediction 112 137 - -
Accr6g00319 337 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Accr6g00319 337 Gene3D - 70 143 - -
Accr6g00319 337 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 232 - -
Accr6g00319 337 CDD SANT 71 112 IPR001005 -
Accr6g00319 337 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr6g00319 337 FunFam Transcription factor TT2 70 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00319 Accr-Chr6 5043317 5045512 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00319 1 120 MYB Transcription Factor Family AT2G16720 75.000 6.25e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr6g00319 Myb_DNA-binding 4.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00319 K09422 - qsa:O6P43_027567 300.441