Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00315 ATGGGAAGGAGTCCTTGCTGTGCAAAGGAAGGTTTGAATAGAGGAGCATGGACTGCTGCTGAAGACAAGATTCTCACTGACTACATTAAGATTCATGGTGAAGGAAAATGGCGACACCTTCCCAAAAGAGCAGGTCTGAAGAGATGTGGGAAGAGTTGTAGGCTGAGATGGTTAAATTATCTAAGACCTGATATCAAAAGAGGAAATATTAGTCGTGACGAAGAGGATCTCATTATCAGACTTCACAATCTTCTTGGAAATAAGTGGTCTTTGATAGCTGGGCGACTCCCAGGACGAACAGACAATGAAATAAAGAACTATTGGAACACCAACATGGGAAAGAAGCTTCAAAATGGGAATAAAGAACTTGGCTCCTCCTCAAGTTTAGCCGGGCAAGACTCCGACCCCGACCCGGATCCCGAGCCTGGCCTAAAGCCCCCACAAAATACGACGACGTCTGGTCCATGCCTGATTCGAACCAAAGCAACAAGGTGCACCAAAGTCATACTGAACCAAGAACTCCAACCATTAATGGCTGCCTCACATTCTTCAACTCACAATAATAATGACAATCACATCAAAATAGAGGCTCCATCACCTTTCATGGATTCCGAGGGAGTTACAAACAACAACGTTTTGGATTTCATGGTGGATGATTTTGAGATTGACGATAATGTCTTTTCAGATCTTATGAATATGAAAGTACCGTCTTGTTTTGAGAATGAAGTTATAGCCATGGAAGCAGCAGCAGACAACAGTAGTGGTGATCAACAAGGTTGTTATCATTTGTGTCCTCATCCCATTTCTAATAATGAAACCTGCTTCATTAATAATTTTTCCGATGATTCAATATTGCATAGCTCCGAGGTATTTCAATCAATGTCGGCTCTCATGGAGAACGAATTGGATTGGCTTTGA 918 0.4227 MGRSPCCAKEGLNRGAWTAAEDKILTDYIKIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNISRDEEDLIIRLHNLLGNKWSLIAGRLPGRTDNEIKNYWNTNMGKKLQNGNKELGSSSSLAGQDSDPDPDPEPGLKPPQNTTTSGPCLIRTKATRCTKVILNQELQPLMAASHSSTHNNNDNHIKIEAPSPFMDSEGVTNNNVLDFMVDDFEIDDNVFSDLMNMKVPSCFENEVIAMEAAADNSSGDQQGCYHLCPHPISNNETCFINNFSDDSILHSSEVFQSMSALMENELDWL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00315 305 SMART sant 66 114 IPR001005 -
Accr6g00315 305 SMART sant 13 63 IPR001005 -
Accr6g00315 305 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Accr6g00315 305 CDD SANT 16 61 IPR001005 -
Accr6g00315 305 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr6g00315 305 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Accr6g00315 305 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 186 - -
Accr6g00315 305 FunFam MYB-related transcription factor 13 66 - -
Accr6g00315 305 MobiDBLite consensus disorder prediction 115 157 - -
Accr6g00315 305 Gene3D - 70 133 - -
Accr6g00315 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr6g00315 305 MobiDBLite consensus disorder prediction 115 133 - -
Accr6g00315 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr6g00315 305 Gene3D - 14 66 - -
Accr6g00315 305 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr6g00315 305 CDD SANT 71 112 IPR001005 -
Accr6g00315 305 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00315 Accr-Chr6 5012899 5014292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00315 1 152 MYB Transcription Factor Family AT4G38620 61.842 2.96e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr6g00315 Myb_DNA-binding 6.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00315 K09422 - gmx:100809225 288.5