Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00312 ATGGCTTGTGAGAGTAATAATTGTAATAAGAGAGTGAAGCCAATTAAAGCCATGACAAATGTGCCTCTTAGTAAAGCAGCATGGACACCTGAAGAAGATAGGAAACTAGCTGAGGCTATTTCAGTTCATGGCGCCAAAAGGTGGAAGTCCATTGCATACAAAGCAGGACTTAGTCGGTGTGGTAAGAGTTGTAGGTTGAGATGGCTAAACTATCTCAGACCCAACATTAAGAGGGGAAACATATCAGCCCAAGAAGAGGATTTGATTCTTCGCCTTCATAAACTCCTTGGAAACAGGTGGTCTTTAATCGCTGGGAGACTACCAGGCCGAACAGATAACGAGATAAAGAATTATTGGAACTCTCATTTGAGCAAGAAAATAAAGATGAAGGAGAAGCACTCAAGCGGGAATTCAACAATAAGACAAGATAACCAACAAAAGGTGGTGGTTATAGAACAGAAGATTCCTCAAGAAGAAGAAGATAAGCAAATCAGAGAAGAGATTCCTACTGAAGAAGCTGAAGGAGACTCGTCATCAAAGCACAGTAGTTTTGTCGTGGACTACGGCTTCTTTGATTTTTCGGTGGAGGAAGGTCCACTGAATCTGGAGTGGGTTAGCCAATTCCTTGAAGTTGATGATACAACTCTCGGACTCTTACAATAA 663 0.4163 MACESNNCNKRVKPIKAMTNVPLSKAAWTPEEDRKLAEAISVHGAKRWKSIAYKAGLSRCGKSCRLRWLNYLRPNIKRGNISAQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKMKEKHSSGNSTIRQDNQQKVVVIEQKIPQEEEDKQIREEIPTEEAEGDSSSKHSSFVVDYGFFDFSVEEGPLNLEWVSQFLEVDDTTLGLLQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00312 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 72 IPR017930 -
Accr6g00312 220 Gene3D - 26 77 - -
Accr6g00312 220 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 19 170 - -
Accr6g00312 220 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Accr6g00312 220 SMART sant 77 125 IPR001005 -
Accr6g00312 220 SMART sant 24 74 IPR001005 -
Accr6g00312 220 CDD SANT 27 72 IPR001005 -
Accr6g00312 220 MobiDBLite consensus disorder prediction 160 178 - -
Accr6g00312 220 Gene3D - 82 155 - -
Accr6g00312 220 Pfam Myb-like DNA-binding domain 27 72 IPR001005 -
Accr6g00312 220 Pfam Myb-like DNA-binding domain 78 123 IPR001005 -
Accr6g00312 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Accr6g00312 220 MobiDBLite consensus disorder prediction 160 181 - -
Accr6g00312 220 SUPERFAMILY Homeodomain-like 23 119 IPR009057 -
Accr6g00312 220 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Accr6g00312 220 FunFam MYB-related transcription factor 24 77 - -
Accr6g00312 220 CDD SANT 82 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00312 Accr-Chr6 4918992 4921605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00312 13 219 MYB Transcription Factor Family AT3G13540 41.850 1.60e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr6g00312 Myb_DNA-binding 6.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00312 K09422 - rcu:8284657 248.054