Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00311 ATGAGAGTGAAACCTGTTGAAGCCATGAGAAATGTGCCTCTTAGTAAAGCAGCATGGACGCCAGAAGAAGATAAAAAACTAGCTGAGGTTATTGCAGTTCATGGGGCAAAAAGGTGGAAGTCCATTGCATCCAAAGCAGGTCTTGATCGGTGTGGTAAGAGTTGTAGGTTGAGATGGTTGAACTATCTCAGACCCAACATTAAGAGGGGAAATATATCTGACCAAGAAGAGGATTTGATTCTTCGCCTTCATAAACTCCTTGGAAACAGGTGGTCTTTAATCGCCGGAAGATTACCAGGCCGAACAGATAATGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAGATAAAGCAGAGGGAGAAGCAATCAAGTGGGAGTTCAACAATAAGACAAGACAACGAACAAAAGGTGGTAGCGGAACATAGGATTCCTGAAAAAAAAGAAGGTAAGCATATCAGAAAAGAGATTTCGACAGAGGAAGCTGAAGAAGACTCATCATTAAAACAGAATCTTGGTGTGGACGGCTTCTTTGATTTTTCCGTAGAGGAAGGTCCATTAAATTTGGAGTGGGTTAGCCAGTTCCTTGAACTTGATGAAACAACTCTTGGACTCTTCTCAATATAA 630 0.4095 MRVKPVEAMRNVPLSKAAWTPEEDKKLAEVIAVHGAKRWKSIASKAGLDRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKQREKQSSGSSTIRQDNEQKVVAEHRIPEKKEGKHIRKEISTEEAEEDSSLKQNLGVDGFFDFSVEEGPLNLEWVSQFLELDETTLGLFSI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00311 209 Gene3D - 17 68 - -
Accr6g00311 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Accr6g00311 209 FunFam MYB-related transcription factor 15 68 - -
Accr6g00311 209 MobiDBLite consensus disorder prediction 136 168 - -
Accr6g00311 209 CDD SANT 73 114 IPR001005 -
Accr6g00311 209 SMART sant 68 116 IPR001005 -
Accr6g00311 209 SMART sant 15 65 IPR001005 -
Accr6g00311 209 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 10 159 - -
Accr6g00311 209 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Accr6g00311 209 Pfam Myb-like DNA-binding domain 18 63 IPR001005 -
Accr6g00311 209 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Accr6g00311 209 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Accr6g00311 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Accr6g00311 209 CDD SANT 18 63 IPR001005 -
Accr6g00311 209 MobiDBLite consensus disorder prediction 120 168 - -
Accr6g00311 209 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Accr6g00311 209 Gene3D - 72 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00311 Accr-Chr6 4853737 4854999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00311 16 118 MYB Transcription Factor Family AT5G40330 69.903 2.70e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr6g00311 Myb_DNA-binding 5.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00311 K09422 - cave:132188282 270.781