Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00308 ATGATAAGTGAAACTAGTGTAAGAAATAGATCTCCTTTCACTGCAATTCAATGGCAAGAACTTGAACAACAAGCTCTTGTCTTCAAATACCTGGTCTCAGGAAGTCCCATACCACCTGATCTCATTTTCTCTGTGAAAAGAAGCCTAGACTCTTCACTATCTTCTTCCTCTTCATCTTCTTCTTCAAGGCTCTTCCCCTTCCATCCAATGGGATGGGGATGCCTAGAAATGGGATATGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAAGAAGCCTATCCAGACTCAAAATACTGTGAGAGGCACATGCACAGAGGCAAAAACCGTTCAAGAAGGCCTGTGGAAATTTCTTCAGCAACAGCAACAACTACTACTGGCATTTCAACGAACACATCTTCACAGTCAATAATCTCTTCATCACCATATAGTAACAGAAGCCTGACCATGATGAGCAATCCCAATCCACACTCATCAAGTTCTCATTTCCCTTTCTCTCTATTGTCCTCTTCTACTATGCCCTCTGATACCCAACAACCTTATTCCCATATGTACCAAAATTCTTCTCTTAATCCCTTGTTCTACAACCTCCCAACCTCATGCAGGCCTCTTGATTCTGATTTTCCTTCTCAAAAAAGCAATACCCACCAGCTATTTTTGGACTCTGGATCTTATTCTAGGGATGAGGCCTATAGGCATATTCATGGAATGAGGGAAGGTGTGGATGAGAGAGCTTTCTTCCCAGAAGCCTCAGGGAGTGTCAGGAGCTTTACTGATTCGTATCAGCATTTACCAATGAGCTCCTGTAAGCCTTATTCAAATTCTCAGTTTCAAAACATCAATGATAATCAAACTCCAAGGCAACAAGAAGAGCAGCAACATAGCTTTGTACTGGAAAGAGACTTCAAACCACAAGGAGAAATAAAACATGATAATGAAACTGAGATGACCCAAAGATCCCTTCATCATTTCCTTGGTGAATGGCCTCCAAAGAACACAGATTCCTGGCTTGATCTTGCTTCAAGTTCCAGAATCCCCTCTGATGAATTATAA 1086 0.4199 MISETSVRNRSPFTAIQWQELEQQALVFKYLVSGSPIPPDLIFSVKRSLDSSLSSSSSSSSSRLFPFHPMGWGCLEMGYGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRRPVEISSATATTTTGISTNTSSQSIISSSPYSNRSLTMMSNPNPHSSSSHFPFSLLSSSTMPSDTQQPYSHMYQNSSLNPLFYNLPTSCRPLDSDFPSQKSNTHQLFLDSGSYSRDEAYRHIHGMREGVDERAFFPEASGSVRSFTDSYQHLPMSSCKPYSNSQFQNINDNQTPRQQEEQQHSFVLERDFKPQGEIKHDNETEMTQRSLHHFLGEWPPKNTDSWLDLASSSRIPSDEL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00308 361 MobiDBLite consensus disorder prediction 125 152 - -
Accr6g00308 361 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr6g00308 361 ProSiteProfiles WRC domain profile. 84 128 IPR014977 -
Accr6g00308 361 Pfam WRC 85 127 IPR014977 -
Accr6g00308 361 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr6g00308 361 PANTHER GROWTH-REGULATING FACTOR 5 11 348 IPR031137 GO:0005634|GO:0006351|GO:0032502
Accr6g00308 361 MobiDBLite consensus disorder prediction 115 152 - -
Accr6g00308 361 Pfam QLQ 12 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00308 Accr-Chr6 4811235 4812599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00308 10 127 GRF Transcription Factor Family AT3G13960 66.949 1.24e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Accr6g00308 WRC 2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00308 - - pcin:129287482 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00308 6 4811235 4812599 Accr6g00308 6 4811235 4812599 ECH