Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00307 ATGTCAAAAATGATAAGTGAAACTAGTGTAAGAAATAGATCTCCTTTCACTGCAATTCAATGGCAAGAACTTGAACAACAAGCTCTTGTCTTCAAATACCTGGTCTCAGGAAGTCCCATACCACCTGATCTCATTTTCTCTGTGAAAAGAAGCCTAGACTCTTCACTATCTTCTTCCTCTTCATCTTCTTCTTCAAGGCTCTTCCCCTTCCATCCAATGGGATGGGGATGCCTAGAAATGGGATATGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAAGAAGCCTATCCAGACTCAAAATACTGTGAGAGGCACATGCACAGAGGCAAAAACCGTTCAAGAAGGCCTGTGGAAATTTCTTCAGCAACAGCAACAACTACTACTGGCATTTCAACGAACACATCTTCACAGTCAATAATCTCTTCATCACCATATAGTAACAGAAGCCTGACCATGATGAGCAATCCCAATCCACACTCATCAAGTTCTCATTTCCCTTTCTCTCTATTGTCCTCTTCTACTATGCCCTCTGATACCCAACAACCTTATTCCCATATGTACCAAAATTCTTCTCTTAATCCCTTGTTCTACAACCTCCCAACCTCATGCAGGCCTCTTGATTCTGATTTTCCTTCTCAAAAAAGCAATACCCACCAGCTATTTTTGGACTCTGGATCTTATTCTAGGGATGAGGCCTATAGGCATATTCATGGAATGAGGGAAGGTGTGGATGAGAGAGCTTTCTTCCCAGAAGCCTCAGGGAGTGTCAGGAGCTTTACTGATTCGTATCAGCATTTACCAATGAGCTCCTGTAAGCCTTATTCAAATTCTCAGTTTCAAAACATCAATGATAATCAAACTCCAAGGCAACAAGAAGAGCAGCAACATAGCTTTGTACTGGAAAGAGACTTCAAACCACAAGGAGAAATAAAACATGATAATGAAACTGAGATGACCCAAAGATCCCTTCATCATTTCCTTGGTGAATGGCCTCCAAAGAACACAGATTCCTGGCTTGATCTTGCTTCAAGTTCCAGAATCCCCTCTGATGAATTATAA 1095 0.4183 MSKMISETSVRNRSPFTAIQWQELEQQALVFKYLVSGSPIPPDLIFSVKRSLDSSLSSSSSSSSSRLFPFHPMGWGCLEMGYGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRRPVEISSATATTTTGISTNTSSQSIISSSPYSNRSLTMMSNPNPHSSSSHFPFSLLSSSTMPSDTQQPYSHMYQNSSLNPLFYNLPTSCRPLDSDFPSQKSNTHQLFLDSGSYSRDEAYRHIHGMREGVDERAFFPEASGSVRSFTDSYQHLPMSSCKPYSNSQFQNINDNQTPRQQEEQQHSFVLERDFKPQGEIKHDNETEMTQRSLHHFLGEWPPKNTDSWLDLASSSRIPSDEL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00307 364 SMART QLQ_2 14 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr6g00307 364 MobiDBLite consensus disorder prediction 118 155 - -
Accr6g00307 364 Pfam QLQ 15 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr6g00307 364 MobiDBLite consensus disorder prediction 128 155 - -
Accr6g00307 364 PANTHER GROWTH-REGULATING FACTOR 5 14 351 IPR031137 GO:0005634|GO:0006351|GO:0032502
Accr6g00307 364 ProSiteProfiles QLQ domain profile. 15 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr6g00307 364 Pfam WRC 88 130 IPR014977 -
Accr6g00307 364 ProSiteProfiles WRC domain profile. 87 131 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00307 Accr-Chr6 4811226 4812599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00307 1 130 GRF Transcription Factor Family AT3G13960 63.077 1.13e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Accr6g00307 WRC 2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00307 - - pcin:129287482 509.99