Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00305 ATGCCCGTCAAAACCTTCCTACTTGGCTGTTTCAGGGCTAAGAAAAATAAAAAGCCATCCTCTGATCCAACTCTAGTCTCCAGAAAGGCACCTTCTAAGAGACTGTCCTTATCTGATTTGAGCGATGCTTCTTCAATCTCTATCATGAGTGATATATCAAACTCTGTTTTGGGATCAAATCTTCATGTTTTCACCTACAAGGAGCTTCAAGAGATCACTAACAACTTCAGCAGCAGCAGTGTTCTCGGAGAAGGCGGGTTCGGCAAGGTGTATAAAGGCTTCATTGATGACAAGCTTAGGCGTGGATTAAAACCTCAAGTTGTGGCAGTTAAGGTTTTAGATTTAGATGGGAAACAAGGCCATAGAGAGTGGTTGGCAGAAGTTATATTTCTGGGGCAGTTGAAGCATCCAAATCTGGTGAACCTAATTGGGTATTGCTGTAAAGATGAGAACAGGCTACTGGTATATGAATACATGGAAAGGGGCAATTTAGAGGACAAGCTTTTTAAAGGCTATTTAGCAGCCTTGCCATGGCTAACAAGAATCAAAATAGCAATTGGGGCAGCAAAAGGTCTTGCCTTTCTTCACGAAGAAGAGAAACCAGTCATATACAGAGATGTTAAAGCCTCAAACATACTATTAGATGCCGATTACAATGCCAAACTATCTGATTTTGGGCTAGCAATAGACGGTCCAGACGAACATGAGAGCCACATCACAACTCGAGTTATGGGTACACATGGCTATGCTGCTCCTGAGTATATTATGACAGGACATTTAACAACAATGAGCGATGTATATAGCTATGGGGTGGTTCTGTTAGAGCTACTTACAGGAAAGAGATCTGTGGACAAGAATCGACCATCGAGAGAGCAGGATTTAGTAGAATGGGCAAGACCACTTCTGAAAAATACCCAGAAACTCGAAAGAATAATGGATCCAAGACTTGAGGGTCAATATTCAGTTGAAGGAGCCAAAATGGTGGCTGCTTTGGTTCACCAATGTCTGAGCCATCAAGCCAAGACTCGACCATCAATGCGAACCATGGTCAACTCATTAGAGTCTATCATGAACCTCACTGACGACATTCCAGTGAGCCCCTTTATCTATGTAGTTCCTGCTGATGGTGAAGTGGACGGTTGTGTACAAAGTAGTCAAATTGAAAAAGAGGATAAAGTGGAGACGAAGGAGAAGGGCCGGCCCAAGAATAGGAGAAATCGAAGACGTAAACGACAGATTAAACCACTGAAGTCTCGTGCCGTTTACACTGATACGACATTGTATAAATCTCTTGGTACTAATTTGTACAATCAAATTAGTGTGATAAATTGA 1332 0.4212 MPVKTFLLGCFRAKKNKKPSSDPTLVSRKAPSKRLSLSDLSDASSISIMSDISNSVLGSNLHVFTYKELQEITNNFSSSSVLGEGGFGKVYKGFIDDKLRRGLKPQVVAVKVLDLDGKQGHREWLAEVIFLGQLKHPNLVNLIGYCCKDENRLLVYEYMERGNLEDKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPDEHESHITTRVMGTHGYAAPEYIMTGHLTTMSDVYSYGVVLLELLTGKRSVDKNRPSREQDLVEWARPLLKNTQKLERIMDPRLEGQYSVEGAKMVAALVHQCLSHQAKTRPSMRTMVNSLESIMNLTDDIPVSPFIYVVPADGEVDGCVQSSQIEKEDKVETKEKGRPKNRRNRRRKRQIKPLKSRAVYTDTTLYKSLGTNLYNQISVIN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00305 443 Gene3D Transferase(Phosphotransferase) domain 1 159 364 - -
Accr6g00305 443 ProSitePatterns Protein kinases ATP-binding region signature. 82 111 IPR017441 GO:0005524
Accr6g00305 443 MobiDBLite consensus disorder prediction 387 413 - -
Accr6g00305 443 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 159 363 - -
Accr6g00305 443 PANTHER OS01G0588500 PROTEIN-RELATED 34 356 - -
Accr6g00305 443 SMART serkin_6 76 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00305 443 ProSiteProfiles Protein kinase domain profile. 76 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00305 443 Pfam Protein tyrosine and serine/threonine kinase 79 353 IPR001245 GO:0004672|GO:0006468
Accr6g00305 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Accr6g00305 443 CDD STKc_IRAK 82 356 - -
Accr6g00305 443 Gene3D Phosphorylase Kinase; domain 1 15 158 - -
Accr6g00305 443 FunFam Serine/threonine-protein kinase BIK1 43 158 - -
Accr6g00305 443 SUPERFAMILY Protein kinase-like (PK-like) 50 354 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00305 Accr-Chr6 4772897 4774938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00305 51 353 Glycoside Hydrolase AT3G07070 49.346 3.32e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr6g00305 PK_Tyr_Ser-Thr 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00305 - - gmx:100790454 597.43