Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00289 ATGGCCGTTGCTCCGGCAATCCTCCGGCCAACTCTCCTCTTTTTCTCCGCCTTCTTCGTGGTTTTTCGATTGGTGAATTCAATGTCAGAAGCTGAAGCTTTGGTTAATTTTAAAGCCTCATTATCCGATAATCAAGCTCTGAAGGATTGGGTGGTTAGCTCTGTTCCTTGCAAAGAAGGCGAAGAATGGTACGGTGTTATCTGTAACGGTGGATTAATCTCTGGCATTCGATTAGAAGGAATAGGGTTATCAGGGAAGATTGATGTAAATCCATTGATGGAACTCAAGCGGCTTCGAACTTTCAGCATTATGAGCAATTCATTTTCAGGTACAATTCCGGAAATCAATAGAATAGGTTTCTTAAGAGCCCTGTACTTGTCGGGCAATCAATTTTCCGGCGAGATTCCGTTGGGTTTCTTCCAGAAAATGAGGTCTCTGAAGAAGCTATATCTTAACAACAACAACTTTACGGGTCAGATTCCGTCGCAGATTCCTCAACTCCTTGAGCTACGGCTTGAGAATAATCAGTTTAGCGGTAATCTCCCAAATCTGAGCAAAACATTGTTGATGGAATTCAATGTGTCCAACAACAAATTGGAAGGCGAAATCCCGACGACCTTATCAAAATTTAGTGCGAGCTCATTTTCCGGGAATCCGGGACTCTGTGGTGAGAAATTAAACAAACCATGTCAAAATTCAGTTGAACCGCCAAAACCCATGGCAAATACGGAACAAGAACAAAATAAAGACGGCGCCGCCGCGTCTGATCCAAATTCTAGCAGTAAGAGTAGTAACTCAGTGAAGATTGCGACCATTGTTGTTGCATCAATTGTAGTGCTTCTCACAATTCTCGCTCTACTCTATGTTCGGTCAAGGCAAAAGAGGAAGGATAACGGAATAATGGGTTCGGTCCAACCAGAGAACAACGACAACGAAGAATCATCAGCATCAGTGCAAGTTCACGTTGCTGCACCAGAGAAGAAAGAAGAGACAATTATGTCCAGGAAATCAAGCCGTAATGGTTCCGGCAGGAGGGGTAAGGGCGGTGGCGGTGTCGGAGAGCTTGTGATGATGAATAGTGAAAGGGGTGTGTTTGGGATGCTGGATTTGATGAAGGCAGCAGCAGAAGTTTTGAGCAATGGAGGGTTTGGATCATCCTATAAAGCAGTGATGGCTGATGGGGTTTCAGTGGTGGTAAAGAGGATCCGGGAGATGAATGTGTTGTCAAAAGATGGGTTTGATGCAGAGATGAGGAAGATTGGGAATTTGAGACATAGGAATATCTTAACCCCTTTGGCTTATCATTATCGGAAGGATGAGAAGTTTTTGGTGTCCGAGTATGTTCCTAATGGGAGTCTGCAATTTTTGCTGCATGGTGATCATGGACCATCCCATACTGAATTGGAGTGGCCTACTGCTTTGAAAATTGTACGAGGGATTGTTGAAGGGATGGTTTATCTTCATAGACAGCTTGCTTCATCCGTTTTACCTCATGGAAATCTCAAGTCTAGCAATATTCTACTTGGTCCTAATTATGAGCCAATGCTAGTTGATTTTGGGTTATGCTCTTTGATCAACCCTGCTAATCTAAGCCAAGCCTTATTTGCTTACAAGACTCCTGAAGCCTTACAAAAAGGAGTTTCTCCCAAATCTGATGTTTATTGTTTGGGAGTTATCATTCTTGAGATCCTCTCTGGGAAATTCCCTTCTCAATATCTCAACAACAGCAGTGGTGGAATTGACGTAGTTCAGTGGGCTAACTCAGCAATATCTGAAGGAATGATGTTAGAGATGCTCGATCCTCAACTTGCAAGCTCTAAAAATTCCATTGGTCAGATGGAGAGACTCCTCTGTATCGGTGTGGCTTGCACCGCAAGCAACCCTGAGCAGCGACCAGACATGTTTGAAGTGTTGAGAAGGATAGATGAAATACAAAATGAAGATTCCCAGGAATCAGCCTCAAAGGATCAAGATGATTGTTCCCAAAGAAGTTTTGGATCATGCAGCGTTGGAAGCCAATCGGGACACCGGCACACTGATAGTGGTGATTTTGCCATTTCCTAA 2064 0.436 MAVAPAILRPTLLFFSAFFVVFRLVNSMSEAEALVNFKASLSDNQALKDWVVSSVPCKEGEEWYGVICNGGLISGIRLEGIGLSGKIDVNPLMELKRLRTFSIMSNSFSGTIPEINRIGFLRALYLSGNQFSGEIPLGFFQKMRSLKKLYLNNNNFTGQIPSQIPQLLELRLENNQFSGNLPNLSKTLLMEFNVSNNKLEGEIPTTLSKFSASSFSGNPGLCGEKLNKPCQNSVEPPKPMANTEQEQNKDGAAASDPNSSSKSSNSVKIATIVVASIVVLLTILALLYVRSRQKRKDNGIMGSVQPENNDNEESSASVQVHVAAPEKKEETIMSRKSSRNGSGRRGKGGGGVGELVMMNSERGVFGMLDLMKAAAEVLSNGGFGSSYKAVMADGVSVVVKRIREMNVLSKDGFDAEMRKIGNLRHRNILTPLAYHYRKDEKFLVSEYVPNGSLQFLLHGDHGPSHTELEWPTALKIVRGIVEGMVYLHRQLASSVLPHGNLKSSNILLGPNYEPMLVDFGLCSLINPANLSQALFAYKTPEALQKGVSPKSDVYCLGVIILEILSGKFPSQYLNNSSGGIDVVQWANSAISEGMMLEMLDPQLASSKNSIGQMERLLCIGVACTASNPEQRPDMFEVLRRIDEIQNEDSQESASKDQDDCSQRSFGSCSVGSQSGHRHTDSGDFAIS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00289 687 CDD STKc_IRAK 378 644 - -
Accr6g00289 687 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Accr6g00289 687 Pfam Protein kinase domain 376 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00289 687 MobiDBLite consensus disorder prediction 299 352 - -
Accr6g00289 687 SUPERFAMILY Protein kinase-like (PK-like) 376 640 IPR011009 -
Accr6g00289 687 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Accr6g00289 687 Gene3D Phosphorylase Kinase; domain 1 369 447 - -
Accr6g00289 687 ProSiteProfiles Protein kinase domain profile. 372 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr6g00289 687 Gene3D Transferase(Phosphotransferase) domain 1 448 669 - -
Accr6g00289 687 SUPERFAMILY L domain-like 28 223 - -
Accr6g00289 687 MobiDBLite consensus disorder prediction 226 265 - -
Accr6g00289 687 MobiDBLite consensus disorder prediction 659 680 - -
Accr6g00289 687 MobiDBLite consensus disorder prediction 645 687 - -
Accr6g00289 687 Gene3D Ribonuclease Inhibitor 186 236 IPR032675 -
Accr6g00289 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 650 IPR046959 -
Accr6g00289 687 MobiDBLite consensus disorder prediction 236 265 - -
Accr6g00289 687 MobiDBLite consensus disorder prediction 302 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00289 Accr-Chr6 4381630 4384007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00289 12 644 Receptor kinase-like Gene Family AT3G42880 43.656 6.84e-179 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr6g00289 Pkinase 2.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00289 - - qsa:O6P43_027522 716.842