Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00288 ATGTCAACTTTTTCTGATACGGAGGCGAATGGCCAGAGGGCCGGGTCCAATTTCTCTCAGACTTGCAATCTCTTCCGCCAGTTCTTGAAGGAGAAGCGTGGTTGTGGTGCTATTAGCCTTGGAATGTCCGGGAAGAAAATTGAACCCAGAGGAAATCCAACTACTACGATGGATTTGTTAACATCCCTGGAACAATCTGATGATATCTCGAAACAAAGTCTTTCAGCTATGGATTTTCTTCCTCAGCTTTTAGAAAACCAGTCTATGATTAGGTCACAGGCCAAGGCAGAGCCTAAAAGTCCTCAAATGGCAATATTTTACTCCGGGAAGGTGTTGGTGTTTGACGATTTTCCGCCGGCGAAGGCGACGGAGATCATGGAGCTAGCCACCAAGTTAAGCTGTGATAATTCTGGGGTCATCAAAAACCTCCGAAGTGCTTCTGTAGAGAATATCAATGAGGTTACGGTGCCTCAAACAAGCACATCCCGAGAAACTTCTCGTCCAGGCCGTCTCTCTTCCGGTCCAGATATAAGGTATCCGAGGAGAGCTTCGCTTTTGAAATTTCTGGAGAAACGAAAAGAAAGGGTTATTGCAAAAGGACCATATCATATGAACCCTAAGCATGAAGCTGGAGGTAGATCTGGAGGCCAACCAGATCAATTTTGCAGACCCTTTGACCTTAACTTTTAG 690 0.4551 MSTFSDTEANGQRAGSNFSQTCNLFRQFLKEKRGCGAISLGMSGKKIEPRGNPTTTMDLLTSLEQSDDISKQSLSAMDFLPQLLENQSMIRSQAKAEPKSPQMAIFYSGKVLVFDDFPPAKATEIMELATKLSCDNSGVIKNLRSASVENINEVTVPQTSTSRETSRPGRLSSGPDIRYPRRASLLKFLEKRKERVIAKGPYHMNPKHEAGGRSGGQPDQFCRPFDLNF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00288 229 Pfam Jas motif 181 202 IPR018467 -
Accr6g00288 229 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
Accr6g00288 229 Pfam tify domain 97 129 IPR010399 -
Accr6g00288 229 MobiDBLite consensus disorder prediction 201 221 - -
Accr6g00288 229 MobiDBLite consensus disorder prediction 155 169 - -
Accr6g00288 229 SMART tify_2 96 131 IPR010399 -
Accr6g00288 229 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 205 IPR040390 -
Accr6g00288 229 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00288 Accr-Chr6 4343790 4344901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00288 17 204 Tify Gene Family AT1G19180 34.272 2.12e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr6g00288 tify 2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00288 K13464 - gmx:100778559 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00288 6 4343790 4344901 Accr6g00288 6 4343790 4344901 ECH