Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00274 ATGGCCGGTTTTTCCTTTGAAACAGACTACAACTCCTCAAGCCAACACTATCCCACACGACGTCACCCGACAACTCCGGTGAGTTCTCGCAATACGTCTCGGTCTTTCAAGGCAGCATCGAGCTCTCGGGGCAGCCACAATCATGGACTTGGCCGCTGGAACAGGACTCCGTCGATTCCCATTACTTCCGACGACGATCGTTCATGGCAGACAGAAGTTTCATGGCAATTTGAACCCACCGGGGGGCGCGAGTACAGTAGCAGAAACTTGGGCTCGATTTTCATTCCTTGGGCCTCAAGCCCAGCCCAATCAGATCGGAGCCGGGTTTTCCGTCGGTCCGCGAAAGATTATTACCTTTCAAGAACGAGGGGGTTCTCTAGAGGAAACCGTTTCGCCGCGAACTCACATTCTGAAGCTTCAGGCTATGTCATTCCATCTGGAAGAGTCGAGCTTCAGAGCTTCGTCGCCGGCGAGAATGGCGATCAGAATAGCAAGTCTTATAGTGGGTTTTCGAGATTGGATGTTATCAAAGAAGGAATTATTGGTCCTAGAAAGGGGAAGAGTAGTCCCTTGGCGGAAGAAGATGAACTTAGTTTTACGTGTCAAGATCCAGAACTGTCATATACGAAACATGATGGTTATCGTGGTCATGGGAAGATAGTACCGGCGCATTTCAGCCACGGCGACGGCGGGTATAGTCATAATGGGAACGACAAGTTTTCTGGGTTTCGTGAAGATGATGATGAGGAGGAGGATATGGATTATAATGATGATGAATTGGATCCTCCAAAAGCTGTTGGGTTGTTCAGCTTGTTTCGGTACTCAACAAAGTGGGATTTAGTGCTTGTGTTTTTGGGTTGCTTGGGAGCTCTCATAAATGGAGGGTCACTTCCTTTTTATTCTTTTCTATTTGGAAAAGTTGTCAATAAGATATCTGAACAATCAAACGATGGTGCTGACAAAGCCAGTATATTTAACGATATAGAGTGGATATGCATATATATGACTATATTAGCTGCAGTGGTGATGGTTGGAGCATATATGGAGATCACATGTTGGAGATTGATTGGAGAGCGATCTGCTCAAAGAATAAGAAGAGAATATCTGAGATCTGTGCTTCGTCAGGACATTAGCTTTTATGATACAGAGATCAGCGCTGCTGATATTATGCATGGGATTGCAAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGATAAGATGGCTCACTTCATTCATCATTTATGCACATTCCTAACTGGGTATGCAGTTGGGTTTGCAAGGTCATGGAAAGTTGCTTTGGTGGTCCTCTCAGTCACCCCAGTGACCATGGTCTGTGGTATAGCTTACAAGGGTATTTATGGTGGTTTATCAGCAAAAGAGGAGGCTTCTTATAGAGCGGCTGGTAGCATTGCAGAGCAGGCCATCAGTTCAATTAGGACAGTTTTTTCTTTTGTTGCTGAAAGCCAGATGGCTACAAAGTATTCTGACCTGCTGAAAAATTCAGTCCCACTTGGGGTCAAAATTGGTTTTGCCAAGGGTGCGGGCCTGGGAGTCATTTATTTAGTAACATACGCAACATGGGCCTTGGCTTTCTGGTATGGCTCTATCTTAATTGCCAAGGGAGAGATTGATGGAGGTCGGGCCATTGCCTGTTTCTTTGGAGTCATGGTAGGGGGAAGAGGCTTGGCATTGGCACTTTCATATTTTGCGCAGTTTGCACAAGGCATTGTTGCAGCAAGCCGAGTATTTGAAATCATAGAGAGAGTCCCTGAGATTGATCCCTACAGCCCTGAAGGAAGGAGGCTTTCTAATGTTCGTGGAAGGATTGAGTTCAAAAGTGTTATCTTTGCATACCCAGCTCGTCCTGATACTCTAATCCTTAATTCCCTTAAACTAGTTATTCCTTCTTCAAGAACTACAGCACTTGTTGGTGCCAGTGGAGGGGGCAAGTCTACCATTTTTGCGCTGGTAGAGAGGTTTTATGACCCTATTGAAGGGATAGTAACCTTAGATGGTCATGATTTGAGGACACTGCAAGTCAAGTGGCTAAGAGATCAAATAGGAATGGTGGGTCAAGAACCAATGCTTTTTGCTACAACCATTCTGGAAAATGTGATGATGGGGAAGGACAATGCCACCAAGAAAGAGGCAATCGCAGCTTGCATTGCGGCTGATGCTCACAACTTCATCTCTGGCCTACCCCTCGGTTATGACACTCAGGTTGGAGCGAAGGGTACCCAACTCTCTGGGGGTCAGAAGCAGAGACTTGCATTGGCTAGAGCCATTATCAAAGATCCTAAAATCCTTATATTGGATGAACCTACCAGTGCTCTTGATGCTAAGTCAGAGTCTGTGGTACAACAGGCCATTGACAAGATTTCTGCTGGGCGAACGACCATTGTCATTGCTCACAGGATAGCAACAGTAAAGAATGCCCATACTATTGTGGTTCTTGAAAATGGTTCTGTGACTGAGATTGGTGATCATCGACAGCTTATGGGAAAGGCAGGTGCCTACTATAACCTTGTCATGCTTGCTACGGAAGCCACATCAAAACCAGTGTCTGACAGCATACAAAAGGTCAAAGATTTTTCTGTCCATGAGAACTCAGTTCCGGATGTAACAAGATCAACAAATACTGTGGATATCTCAAGGTCCAAGTTCTTCAAATCCATTCAAGATGAAAAACAAGCTGCTACGGAAGATGAACAACAAAAGAAGCCCAGAAATTATCAACTTTCTGAGGTATGGAAACTGCAAAAACCGGAGTTTGTGACTCTGTTTTCAGGATTTGTTCTGGGTATGATTGCTGGTGCTTTTCTCTCCATTTTTCCGTTGCTTCTAGGCATAGCCCTTGAAGTATACTTTAAAAACGACACAAAAACAATGAAAAAAGATATCAGCCATCTATGTTTAATTCTTATTGGGCTGGGGTTTGGTTGCATAATCTCTCTGACAGGACAGCAAGGTTTGTGTGGTTGGGCTGGAACTAAGCTCACGATGAGGATTAGAGACCTCCTTTTTCAATCCATACTAAAACAAGAACCAGGGTGGTTTGATTTTGATGAAAATTCCACAGGAGTGCTTGTGTCAAGGCTATCTATTGACTGTATTAGTTTTCGATCAGTGCTTGGTGATCGAGTTTCTGTCCTTCTAATGGGGCTGAGCTCAGCTGCTGTTGGGCTTGGGGTGTGCTTCAAATTTGATTATAGAATAACTTTGTTGGCTGCTGCACTAACTCCTTTCACTCTTGGTGCAAACTATCTAAACTTGATTATAAACCTTGGACCACGAGTCAACAATGATTCCTTTGCCAGAGCTAGTAACATCGCTTCTGGTGCAGTTTCAAACATAAGAACAACCCTTGCCTTTTCTGCCCAAGAACAGATAGTCAAAACCTTTGATCGAGCATTATCAGAACCTAGGAGAAAATCAGTAAAAAGATCACAGATTCTCGGTCTAGTGCTTGGGTTCTTCCAAGGGGCCATGTATGGAGCATACACCTTAGCTCTTTGGTTTGGTGCCCTCCTTGTAAAAAAAGAAAAAGCAGACTTCGGGGCTGTATACAAGATTTTTCTCATCCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTAGCACCAGATACTTCAATGGCAGCTACTGCAATTCCATCTGTTCTAGATATCATACAACGTAGACCATTGATAGGGAATGATGGGAACAAAGGTAAGAAACTAGAAAGATCAAAGCTGTTGAAGTTAGAATTCAAAATGGTGACATTTGCGTATCCATCTAGGCCTAATGTGGTAGTGTTGAGGTATTTCAATTTGAAAATCAAAGGTGGAAGCACAGTTGCCTTAGTAGGGGCAAGTGGATCAGGAAAATCAACAGTCATATGGTTGATACAGAGGTTCTATGATCCAAACCAGGGGCAAGTGATGATGGGTGGGTTAGATTTGAGAGCCATTGATGTGAAGTGGTTGAGGAGGCAAACAGCTTTGGTGGGTCAAGAACCAGCACTGTTTGCCGGGAGTATGAGGGACAATATTGCCTTTGGAGACCCAGAAGCTTCCTGGGCTGAAATTGAAGTGGCAGCAAAGGAAGCTTACATTCACAAATTCATTAGTAGCCTTCCTCAAGGTTATGAAACTCAGGTTGGTGAAAGTGGGGTCCAGCTATCAGGCGGCCAAAAACAGAGGTTAGCAATTGCAAGGGCCATATTGAAGAAATCAAGGGTACTACTACTTGATGAAGCAAGTAGTGCCTTGGACTTGGAATCAGAGAAGCATGTCCAAGAAGCACTGAAGAATGTTACAAAAGATACAACTACTGTAATAGTAGCTCACCGTCTTTCTACGATCAGAGAGGCCGGTAGCATCGCGGTGGTGAGAGAAGGAACGGTGGCTGAATATGGAAGCCATGATACTCTCCTTGCTTCCCATCCCAATGGTTTGTATGCAAACCTGATTCGTTCTGACACTGAAGTCAATGCCTTTAAATAA 4494 0.4419 MAGFSFETDYNSSSQHYPTRRHPTTPVSSRNTSRSFKAASSSRGSHNHGLGRWNRTPSIPITSDDDRSWQTEVSWQFEPTGGREYSSRNLGSIFIPWASSPAQSDRSRVFRRSAKDYYLSRTRGFSRGNRFAANSHSEASGYVIPSGRVELQSFVAGENGDQNSKSYSGFSRLDVIKEGIIGPRKGKSSPLAEEDELSFTCQDPELSYTKHDGYRGHGKIVPAHFSHGDGGYSHNGNDKFSGFREDDDEEEDMDYNDDELDPPKAVGLFSLFRYSTKWDLVLVFLGCLGALINGGSLPFYSFLFGKVVNKISEQSNDGADKASIFNDIEWICIYMTILAAVVMVGAYMEITCWRLIGERSAQRIRREYLRSVLRQDISFYDTEISAADIMHGIASDVAQIQEVMGDKMAHFIHHLCTFLTGYAVGFARSWKVALVVLSVTPVTMVCGIAYKGIYGGLSAKEEASYRAAGSIAEQAISSIRTVFSFVAESQMATKYSDLLKNSVPLGVKIGFAKGAGLGVIYLVTYATWALAFWYGSILIAKGEIDGGRAIACFFGVMVGGRGLALALSYFAQFAQGIVAASRVFEIIERVPEIDPYSPEGRRLSNVRGRIEFKSVIFAYPARPDTLILNSLKLVIPSSRTTALVGASGGGKSTIFALVERFYDPIEGIVTLDGHDLRTLQVKWLRDQIGMVGQEPMLFATTILENVMMGKDNATKKEAIAACIAADAHNFISGLPLGYDTQVGAKGTQLSGGQKQRLALARAIIKDPKILILDEPTSALDAKSESVVQQAIDKISAGRTTIVIAHRIATVKNAHTIVVLENGSVTEIGDHRQLMGKAGAYYNLVMLATEATSKPVSDSIQKVKDFSVHENSVPDVTRSTNTVDISRSKFFKSIQDEKQAATEDEQQKKPRNYQLSEVWKLQKPEFVTLFSGFVLGMIAGAFLSIFPLLLGIALEVYFKNDTKTMKKDISHLCLILIGLGFGCIISLTGQQGLCGWAGTKLTMRIRDLLFQSILKQEPGWFDFDENSTGVLVSRLSIDCISFRSVLGDRVSVLLMGLSSAAVGLGVCFKFDYRITLLAAALTPFTLGANYLNLIINLGPRVNNDSFARASNIASGAVSNIRTTLAFSAQEQIVKTFDRALSEPRRKSVKRSQILGLVLGFFQGAMYGAYTLALWFGALLVKKEKADFGAVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPSVLDIIQRRPLIGNDGNKGKKLERSKLLKLEFKMVTFAYPSRPNVVVLRYFNLKIKGGSTVALVGASGSGKSTVIWLIQRFYDPNQGQVMMGGLDLRAIDVKWLRRQTALVGQEPALFAGSMRDNIAFGDPEASWAEIEVAAKEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRLAIARAILKKSRVLLLDEASSALDLESEKHVQEALKNVTKDTTTVIVAHRLSTIREAGSIAVVREGTVAEYGSHDTLLASHPNGLYANLIRSDTEVNAFK 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00274 1497 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524|GO:0016887
Accr6g00274 1497 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1102 1242 - -
Accr6g00274 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 601 845 IPR027417 -
Accr6g00274 1497 ProSitePatterns ABC transporters family signature. 1390 1404 IPR017871 GO:0005524|GO:0016887
Accr6g00274 1497 SUPERFAMILY ABC transporter transmembrane region 270 595 IPR036640 GO:0005524|GO:0016020
Accr6g00274 1497 CDD ABC_6TM_Pgp_ABCB1_D2_like 918 1233 - -
Accr6g00274 1497 MobiDBLite consensus disorder prediction 236 257 - -
Accr6g00274 1497 Pfam ABC transporter 628 777 IPR003439 GO:0005524
Accr6g00274 1497 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 575 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr6g00274 1497 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 610 846 IPR003439 GO:0005524
Accr6g00274 1497 CDD ABC_MTABC3_MDL1_MDL2 610 847 - -
Accr6g00274 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1249 1488 IPR027417 -
Accr6g00274 1497 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1251 1487 IPR003439 GO:0005524
Accr6g00274 1497 CDD ABC_MTABC3_MDL1_MDL2 1252 1488 - -
Accr6g00274 1497 MobiDBLite consensus disorder prediction 1 67 - -
Accr6g00274 1497 Gene3D ABC transporter type 1, transmembrane domain 332 1092 IPR036640 GO:0005524|GO:0016020
Accr6g00274 1497 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 931 1215 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr6g00274 1497 PANTHER ABC TRANSPORTER B FAMILY 246 846 IPR039421 -
Accr6g00274 1497 Pfam ABC transporter 1272 1417 IPR003439 GO:0005524
Accr6g00274 1497 Gene3D ABC transporter type 1, transmembrane domain 1101 1247 IPR036640 GO:0005524|GO:0016020
Accr6g00274 1497 SMART AAA_5 1278 1470 IPR003593 GO:0016887
Accr6g00274 1497 SMART AAA_5 637 838 IPR003593 GO:0016887
Accr6g00274 1497 FunFam Multidrug resistance protein 1, 2, 3 608 860 - -
Accr6g00274 1497 Pfam ABC transporter transmembrane region 283 559 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr6g00274 1497 Pfam ABC transporter transmembrane region 929 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr6g00274 1497 CDD ABC_6TM_Pgp_ABCB1_D1_like 284 583 - -
Accr6g00274 1497 SUPERFAMILY ABC transporter transmembrane region 917 1231 IPR036640 GO:0005524|GO:0016020
Accr6g00274 1497 Gene3D - 608 866 IPR027417 -
Accr6g00274 1497 Gene3D - 1249 1490 IPR027417 -
Accr6g00274 1497 FunFam ABC transporter B family member 1 1240 1491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00274 Accr-Chr6 4215147 4223641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00274 261 1488 Calmodulin-binding Proteins AT2G36910 40.673 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00274 K05658 - gmx:100816700 2003.02