Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00273 ATGGAAGCTGATGACAAGATCCAGTCGCCTCATTCGCCGGCCAGTGAATCCCCGGGTTCGCCGCCGGCCAACGGTCGGATCACGGTTACGGTGGCTGCGCCGGCGCCGTCGCCGCCCCACAACAGCTTGGCACTAGCGCTTCCGGCCCAGCACCAGCAGTCAAAGGGTAATGGTGGTGGTGGAGGAGGGAGGGAGGATTGCTGGAGTGAAGGAGCGACGGCGGTGTTGATCGACGCGTGGGGGGAGAGGTATTTGGAACTGAGCCGGGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTTGCGGATATTGTGAGTAGCAGGGAGGACTACAGGAAGACCCCCAAGACTGATATTCAGTGCAAGAATCGGATCGACACTGTCAAGAAGAAGTACAAGTTGGAGAAGTCCAAGATCGCGGCCGGTAGTGGCCCTAGTAAATGGCCGTTCTACGAGAGGTTGGACCAGTTGATCGGTCCGACTGCGAAAATTCCTGGGTCTTCCGGCGGCGCGGCCGCCGGAGGTAACACGGCGAACAGTCTGTCAAATCAGAAAATGCCTCTGGGAATTCCTGTAGGAGTTCGTGCTGCGAATCAGAATCCGTATCAGGCTCATCAACGACTGCAGAAGCCTCAGCTTCGGATGAAGACGCCAAGCCAGAAGATACAGTTGCGGAAGCGTGCTCCGGTTAACTCAGATTCGTCTCCGTCTGAGAGAGAATCGTCGCCGGTTTCGAGTGATAGTTTTCCACCGGGTACGTATGAGACGAAGAGACCCAGAATGGCAAGAGTGGTCAATTCTGATGCTGCGCCTGTAGAAACAAAGAGTAAAGGTTGGGGAAGTGCTATCAGGGAATTGACGCAGGCCATACTGAAATTCGGGGAAGCATATGAAAAGGCAGAGAGCTCGAAGATTCAGCAGGTTGTGGAAATGGAGAAGCAGAGGATGAAATTTACCAAGGAGATGGAATTGCAGAGAATGCAGTTCTTCATGAAGACCCAGCTGGAATTATCGCAGCTGAAGCGTGGTAAGAGAGGAGGAGGAGGAGGAGGAGGAAACGCCAGCAACATCAACAATAACATTAACAATCATAGTGACAGTGATAACCTGTGA 1110 0.536 MEADDKIQSPHSPASESPGSPPANGRITVTVAAPAPSPPHNSLALALPAQHQQSKGNGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSSREDYRKTPKTDIQCKNRIDTVKKKYKLEKSKIAAGSGPSKWPFYERLDQLIGPTAKIPGSSGGAAAGGNTANSLSNQKMPLGIPVGVRAANQNPYQAHQRLQKPQLRMKTPSQKIQLRKRAPVNSDSSPSERESSPVSSDSFPPGTYETKRPRMARVVNSDAAPVETKSKGWGSAIRELTQAILKFGEAYEKAESSKIQQVVEMEKQRMKFTKEMELQRMQFFMKTQLELSQLKRGKRGGGGGGGNASNINNNINNHSDSDNL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00273 369 MobiDBLite consensus disorder prediction 339 369 - -
Accr6g00273 369 Pfam Myb/SANT-like DNA-binding domain 65 156 IPR044822 -
Accr6g00273 369 MobiDBLite consensus disorder prediction 1 68 - -
Accr6g00273 369 MobiDBLite consensus disorder prediction 160 270 - -
Accr6g00273 369 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 39 343 IPR044823 -
Accr6g00273 369 MobiDBLite consensus disorder prediction 198 251 - -
Accr6g00273 369 Gene3D - 68 133 - -
Accr6g00273 369 MobiDBLite consensus disorder prediction 10 24 - -
Accr6g00273 369 MobiDBLite consensus disorder prediction 171 185 - -
Accr6g00273 369 FunFam trihelix transcription factor ASIL2 68 133 - -
Accr6g00273 369 MobiDBLite consensus disorder prediction 351 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00273 Accr-Chr6 4180466 4182303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00273 1 346 Trihelix Transcription Factor Family AT3G14180 46.948 7.58e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr6g00273 Myb_DNA-bind_4 5.9e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00273 - - qsa:O6P43_027506 439.884